BGIOSGA002554

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Revision as of 10:38, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002554| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002554, complete gene.| tag = P0005A0...")
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Gene Name

BGIOSGA002554

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002554, complete gene.

LocusTag

P0005A05.12

Ensembl Transcript ID

BGIOSGA002554-TA

Ensembl Protein ID

BGIOSGA002554-PA

Length

1401

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:344723..346123

Sequence Coding Region

346064..346123,345903..345974),complement(345781..345819,345533..345640),complement(345356..345453
,345157..345268),complement(344723..344971

Genome Context

<gbrowseImage1> name=IndicaChromosome01:344723..346123 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:344723..346123 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGCTTTAGTGGAGTAGACCTCACAAGATTAAGGACAAAAAAGGGGCACACTGCTCAGTGTGCATGCTTGGTCGATGCAAGTGGCAATCGCACCATGCGCCCTTGCCTATCTAGTGCAGTCAAGCTCCAGGCCAACGAGTTCAAAAAGGAGGACTTCAAAGGCTCCAAGTGGTTGGTTGTACGATATGCAAGACAGAACATGGAACAGATCCTTGAAGCTATTAGGATTGCTAAACAAGAAGGTCTCTCAGTATCATTGGATTTGGCTAGTTTTGAGATGGTTCGTGACTATAGGACACAACTCATTGACCTTTTGGAAACTGGCAACATTGACCTTTGCTTTGCCAATGAGGATGAAGCTAGAGAGCTTCTAGGGGGAGAGCTGACATTTGATCCAGAGGAGGCACTTGCTTTCTTGGCCAAGTACTGTAAATGGGCCGTGGTGACCCTAGCTTCTAAGGGATGCATAGCGAAGCATGGGAAGCAGGTGGTTCAAGTGGCGGCAACCGGGGAGAGTAATGCGGTGGACGCGACGGGGGCGGGGGATCTGTTTGCGAGCGGGTTCCTGTACGGGTTGGTGAAAGGGCTGGCATTGGAGGAGTGCTGCAAGGTAGGGGCGTGCAGCGGTGGGTCAGTGGTGAGGGCTCTGGGCGGGGAGGTGAGGCCGGAGAACTGGCAGTGGATGTACAAGCAGATGAACGCCAGTGGCCTGCTGCTCCCTGACCTCAAGAACTGA</cdnaseq>

Protein Sequence

<aaseq>MSFSGVDLTRLRTKKGHTAQCACLVDASGNRTMRPCLSSAVKLQANEFKKEDFKGSKWLVVRYARQNMEQILEAIRIAKQEGLSVSLDLASFEMVRDYRTQLIDLLETGNIDLCFANEDEARELLGGELTFDPEEALAFLAKYCKWAVVTLASKGCIAKHGKQVVQVAATGESNAVDATGAGDLFASGFLYGLVKGLALEECCKVGACSGGSVVRALGGEVRPENWQWMYKQMNASGLLLPDLKN</aaseq>

Gene Sequence

<dnaseqindica>1..60#150..221#305..343#484..591#671..768#856..967#1153..1401#ATGAGCTTTAGTGGAGTAGACCTCACAAGATTAAGGACAAAAAAGGGGCACACTGCTCAGGTAGTCTAAAATCTGAAGCCAATATCTATCTATTTTTTGCCCTTATTTTGCTGCTTAGTGGATAAGGCTGAAAATAATACCTATTATAGTGTGCATGCTTGGTCGATGCAAGTGGCAATCGCACCATGCGCCCTTGCCTATCTAGTGCAGTCAAGCTCCAGGTAACCCTTGCTTGATGCAGTCTTACACTGTTACTTTTCTCTTAACAGTCGTAGGCTTGATACGATCATTTACTCATTAACAGGCCAACGAGTTCAAAAAGGAGGACTTCAAAGGCTCCAAGGTGGTCCTTTTCCTCTTACGCCACATTCTGTGCACACAAATTCCAGCATATGTTACCATCACACAAAAAATCTTACTATGTCATAATAAATATGTTTATTTTTTGACATGGAATGTTTTTGTCATCATGATGTAATGCAGTGGTTGGTTGTACGATATGCAAGACAGAACATGGAACAGATCCTTGAAGCTATTAGGATTGCTAAACAAGAAGGTCTCTCAGTATCATTGGATTTGGCTAGTTTTGAGGTCTGACCGCAGCTCATTGGTACCGTAAGGTCTTTTTTTGGTACAGGCACCAGTCTGATTTTGTTTATTTATTACACAGATGGTTCGTGACTATAGGACACAACTCATTGACCTTTTGGAAACTGGCAACATTGACCTTTGCTTTGCCAATGAGGATGAAGCTAGAGAGCTTCTAGGGTGATACACTCATCGCCTTATTGTTTCAGATGTTCTTCAGTGAGTGATACCTATTATAGTATATCTGATGTGTGCGTGTTTTTTCAGGGGAGAGCTGACATTTGATCCAGAGGAGGCACTTGCTTTCTTGGCCAAGTACTGTAAATGGGCCGTGGTGACCCTAGCTTCTAAGGGATGCATAGCGAAGCATGGGAAGCAGGTGAGATCAAGGTTATTGTGATGTACTACAATAGCAATGTTATTTGGGATGTTATTGTGATGCATACTAGTATTTGATACACATGCATGATGCATGGTTCAGAGTTGAGAATGGTTTCCTTTGCAGTTTGTTTGAGCAACAAGAAGGCGGCTTTATTAACATGTAAAGTGAAAAATAAAATGCAGGTGGTTCAAGTGGCGGCAACCGGGGAGAGTAATGCGGTGGACGCGACGGGGGCGGGGGATCTGTTTGCGAGCGGGTTCCTGTACGGGTTGGTGAAAGGGCTGGCATTGGAGGAGTGCTGCAAGGTAGGGGCGTGCAGCGGTGGGTCAGTGGTGAGGGCTCTGGGCGGGGAGGTGAGGCCGGAGAACTGGCAGTGGATGTACAAGCAGATGAACGCCAGTGGCCTGCTGCTCCCTGACCTCAAGAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002554