BGIOSGA002562

From RiceWiki
Revision as of 10:38, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002562| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002562, complete gene.| tag = P0436E0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA002562

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002562, complete gene.

LocusTag

P0436E04.3

Ensembl Transcript ID

BGIOSGA002562-TA

Ensembl Protein ID

BGIOSGA002562-PA

Length

2028

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:202081..204108

Sequence Coding Region

204040..204108,203806..203957),complement(203614..203707,203434..203505),complement(202800..202911
,202442..202590),complement(202081..202131

Genome Context

<gbrowseImage1> name=IndicaChromosome01:202081..204108 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:202081..204108 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGAAGATCTTTGGAGCCAAGAAGAGCAAGGACCCGCCCCCATCCATCCAGGACGCTACCGAACGAATCAACAAGAGGGGGGAGAGCGTGGACGACAAGATCAAGAAGCTGGACGAAGAGCTCGGCCGTTACAAGGAGCAGATCAGGAAGACACGCCCTGGACCCTCCCAGGACGCCATTAAGGCCCGCGCCATCAGGCTTCTCAAGCACAAGCGCATGTACGAAGAACAGCGCAACATGCTCTACAACCAGACCTATAATCTCGACCAAGTCGCTTTCGCTGCCGATGGCCTCAAAGACGCTCAGCAGACCATGAATGCCATGAAGGCCGCCAATAAAGAGCTCAAGGGAATGATGAAGACAGTCAAGATTGAGGACATCGATAATATGCAAGATGAAATGACTGACCTGATGGATGTGAGCAACGAAATACAAGAATCCCTTGGTAGAAGCTACAACATCCCTGACGATGTTGATGAGGAAGAACTAATGGGAGAACTGGATGCTTTGGAGGCTGATATGGAGTTTGAGTCAAGTGCAGTCCCATCGTATCTTCAACCAGACAAGGAATCCGATTTCGATGCAGAGCTTAATTTGCCAGCTGCACCTACCGCTCCTGCAGCAGTCCCAGTAAGCAGGCAGCAGGTGGATGAGCTAGGATTGCCAGCAGTCCCTCGAGCATCAATCCGCAGTTAG</cdnaseq>

Protein Sequence

<aaseq>MKKIFGAKKSKDPPPSIQDATERINKRGESVDDKIKKLDEELGRYKEQIRKTRPGPSQDAIKARAIRLLKHKRMYEEQRNMLYNQTYNLDQVAFAADGLKDAQQTMNAMKAANKELKGMMKTVKIEDIDNMQDEMTDLMDVSNEIQESLGRSYNIPDDVDEEELMGELDALEADMEFESSAVPSYLQPDKESDFDAELNLPAAPTAPAAVPVSRQQVDELGLPAVPRASIRS</aaseq>

Gene Sequence

<dnaseqindica>1..69#152..303#402..495#604..675#1198..1309#1519..1667#1978..2028#ATGAAGAAGATCTTTGGAGCCAAGAAGAGCAAGGACCCGCCCCCATCCATCCAGGACGCTACCGAACGAGTATTCTCCTCGTCTAGGCCATTTGCTCGCACGCCATCTCTCTTAGTTTGAACATTTCCTCTCTATGTGTATGTGATTGAAGATCAACAAGAGGGGGGAGAGCGTGGACGACAAGATCAAGAAGCTGGACGAAGAGCTCGGCCGTTACAAGGAGCAGATCAGGAAGACACGCCCTGGACCCTCCCAGGACGCCATTAAGGCCCGCGCCATCAGGCTTCTCAAGCACAAGCGCATGTACTCTACTCTACTCTTACTCACTATTCTACTACTAGTAGAGTATTTGCTACTACTCCACTATGCAACTCTGATGAATGTACGTTGCCTGTTTCAAGGTACGAAGAACAGCGCAACATGCTCTACAACCAGACCTATAATCTCGACCAAGTCGCTTTCGCTGCCGATGGCCTCAAAGACGCTCAGCAGACCGTACGTACTACTCCACATATATAGCCCGCCTTGTTTGTTCCTACTGTCTCCATGTCTATGAATTATTGCCGAACCATTCTTTTGTTTGTTAATTTATCGATTCCTCAGATGAATGCCATGAAGGCCGCCAATAAAGAGCTCAAGGGAATGATGAAGACAGTCAAGATTGAGGACATCGATGTATGCTTCTCTTTCTCTTTAGTTGCTACTTACTACAGCTACCTTACCAAGATATTCCTTCCTCATGTGCATTTCTTTATCAGGTGCTACCATTTGAGCTGTCCCCATCCTGTGTTTTGTATCATGCCCATTCCTTGAAAAAAACTTGCTGTCAAATCTTTTCTTTTTTATATATTGAAAGGGAAAAACCTGCTTATAGATTTTTCATAACCATGCAAACAGACCAATTGTTCTCTCAAGGACAATTGCTCCAGTGCAGATATTTTATTGGGCATTGCATTCCTAGTTTCAGACGCTATCCTTCATTACATTTCAAGCTAATCTGCAGGATTTGCCTATTGTTTAGATCATCAACACATTTTACACCAGTATATCCATTGATTTACAAGAAAACCATACAAAAACCACAATTGTCAATCTTTTTTAAGTGCGGTTATCAACCGCCCTTGAAATTGCTTGTTGGACTATCTTGAGTATTATCATCTTTTTTCGCGTAAAACGAATGCCCTGATCCACCTGTAGAATATGCAAGATGAAATGACTGACCTGATGGATGTGAGCAACGAAATACAAGAATCCCTTGGTAGAAGCTACAACATCCCTGACGATGTTGATGAGGAAGAACTAATGGGAGGTATGGACGCTGTACCATCAGTTGGCCAATTGGAAAATGATGGTTGGCAATTTACTTGGCATTATTGTCATTCATAGGCATCTGGAAGTAATAACATAGATTCATGCCATAAATTGCCTAGCTTGTTGCCATGCCTTCATTCTTCCTGGGACCATTGCAGGGCTGGAGATAATAATCTATCTACTGTCGTTGTTTCTTGAACATTGCAGAACTGGATGCTTTGGAGGCTGATATGGAGTTTGAGTCAAGTGCAGTCCCATCGTATCTTCAACCAGACAAGGAATCCGATTTCGATGCAGAGCTTAATTTGCCAGCTGCACCTACCGCTCCTGCAGCAGTCCCAGTAAGCAGGCAGCAGGTTAGTTTATATTATTGTTATTTTTATTCAGATGCTTGCTTTGTCATGATGATTCGAGAACTATCTAGTCCCATGTATGTACTAGAGGAATGAATGATGAATTTTCCTTTCCTTTTTTCTTAAGAAGTTGTTATTCATGAGTTAGCAGTGTCTGTTGTTCACTATCCCAAGTTCAAATATTCTTGCATAGACTAGGTGCATTGTTGATCAACAGCTAAAACAACCATGTTTTGTATGAACCAATTAGATTGGTCCGTAGTTTACCTGTTTTAAGCTTGTACTGAATGTTGCCTGGTGCTATCTGGTGCAGGTGGATGAGCTAGGATTGCCAGCAGTCCCTCGAGCATCAATCCGCAGTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002562