Os11g0438700

From RiceWiki
Revision as of 09:09, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0438700| Description = Similar to Tropinone reductase-I (EC 1.1.1.206) (TR-I) (Tropine dehydrogenase)| Version = NM_001074341.1 GI:115485330...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os11g0438700

Description

Similar to Tropinone reductase-I (EC 1.1.1.206) (TR-I) (Tropine dehydrogenase)

Version

NM_001074341.1 GI:115485330 GeneID:4350416

Length

5478 bp

Definition

Oryza sativa Japonica Group Os11g0438700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:16154316..16159793

Sequence Coding Region

16154370..16154458,16154571..16154778,16154887..16154952,16155260..16155416,16158004..16158110
,16158481..16158648

Expression

GEO Profiles:Os11g0438700

Genome Context

<gbrowseImage1> name=NC_008404:16154316..16159793 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:16154316..16159793 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccatggcgactaccagctctaaaaacgagaggtggagcctcgccggcgccaccgcgctcgtcaccggcggcagcaaaggcatcggccgcgccatcgtcgaggagctcgccagcttgggcgcgacggtgcacacctgcgcccggaccgaggcgccgctgaacagatgccgggaggagttgacggccaagggccttgccgtcaccgtctccgtctgtgacgtctcgttgcgtgccgacagggaggcgctcgccggcacggtgcgcgagctcttcggcggcaagctcagcatcctggtgaactgcgccgggatgtcgttcctgaagccggcggtggagctgacgccggacgattgctcgcaggtgatggggatgaacttcgagtcgtgcttccacttgagccagctggcgtaccctctcctcaaggcctctcagagaggttgtatcatcaacatctcgtccattgcttcggtggtcgcgttctgctctcttcccaacgccgtctactcagctgctaaaggagcaatgaaccaagtcacaaggaacctggctgctgagtgggcgaacgatgggatcagagttaactgtgttgcgccaggcttcattcgtactccgctcctatctgaattcgtggagggtaacgagttggggcgagcagagttcagccgtgttcccatgggccgtctcggtgaaccagaggacatcgcatcgctggtggcgtttctgtcaatgccagcgtcctcctatataaccggtcaggtcatatgcgccgacggcggtcgctgcctttcttga</cdnaseq>

Protein Sequence

<aaseq>MAMATTSSKNERWSLAGATALVTGGSKGIGRAIVEELASLGATV HTCARTEAPLNRCREELTAKGLAVTVSVCDVSLRADREALAGTVRELFGGKLSILVNC AGMSFLKPAVELTPDDCSQVMGMNFESCFHLSQLAYPLLKASQRGCIINISSIASVVA FCSLPNAVYSAAKGAMNQVTRNLAAEWANDGIRVNCVAPGFIRTPLLSEFVEGNELGR AEFSRVPMGRLGEPEDIASLVAFLSMPASSYITGQVICADGGRCLS</aaseq>

Gene Sequence

<dnaseqindica>55..143#256..463#572..637#945..1101#3689..3795#4166..4333#aaactacattcactgaaacgaagagaaattgagacctctaggctccagccgtacatggccatggcgactaccagctctaaaaacgagaggtggagcctcgccggcgccaccgcgctcgtcaccggcggcagcaaaggcatcgggtaagactaatctaccaaatcttctcagctgattgacgcacgccagcatatgcgcaagccgcgttccactgatcgatcggatcgttatcgtacatattgccaaccctcgcagccgcgccatcgtcgaggagctcgccagcttgggcgcgacggtgcacacctgcgcccggaccgaggcgccgctgaacagatgccgggaggagttgacggccaagggccttgccgtcaccgtctccgtctgtgacgtctcgttgcgtgccgacagggaggcgctcgccggcacggtgcgcgagctcttcggcggcaagctcagcatcctggtaaattaacgacccatgtagaaattagctaaggcagcttagctgccgtggtcgattttgatagtgttatctgtgacacacgaatccgtggcgagctcatgaatgcaggtgaactgcgccgggatgtcgttcctgaagccggcggtggagctgacgccggacgattgctcgcaggtaggggtggttaaggcgttatgggtcttaattttttaacctacaaaatttaagagctgaggctatatttagttccacgccaaaattggaagtttgattaaaattgaaagtttgaaaaaaaatgttgaaagtttatgtgtgtaggaaagttttgatgtgatggaaaaattgagaactaaaccaggcctcaatatgaaatgagttacgctgaatttctatttatttttttatctaaaaatatttagagtctgaataagatcgtagaagaacctatacacattgacccattaccacctctacttcgtaggtgatggggatgaacttcgagtcgtgcttccacttgagccagctggcgtaccctctcctcaaggcctctcagagaggttgtatcatcaacatctcgtccattgcttcggtggtcgcgttctgctctcttcccaacgccgtctactcagctgctaaaggtcaaaacaaacaacctttgctatcttggacatatttcaaaaatattttttatctaaaaagaatatataatggagtatgtagtagtataccagcatcacggtttttccatgataatttatatttagcattcgatatttgttccacaaagtgtttgcttgagaattgagactcgtttcctttgactaatggatgagtaattagagtccctttgatttgtatgaaaaacacataaaatttcgaggatttcaatcatatagaatttctttttgaaattcctatttaacgcacaatcgtatcgacattttggaggaaacatagcaagagttccatcctcttgaaaaattgcttgaatctatctctctcattcgattcatacgtttttcttgccgtctaatcaaacaacagttcctgtacgtgtttttcctgtattttatcattctctattttgtatttgcatttctatcggaatcttgtgatttttttattgcactatttttacatttttgcgattcaatgggaccctccatgggctccagttaactgaacgatatcactgtggcaccttagacatttctccacttaactgatttctataaaaatcgcttaatatcatgtttgtttaggaggtggaagagttttctagaaaacggatatagcactattaccagaatttgaaaatataaggggcattttgtctattagaacaaggctttgaccagcttgttaactattactagtatctcactagaaattgagcgtgccaattggtacgcttgttttatagctcttgcattcgtttttgtgttgttaaaaagtattatgtgtcttgcaaaaagacgacatcatcaaatttccatatcttaagctattaaattgtaaatatcatattaatatttttttaatgaaaacttagttgtattttaatttttatagatatgtagtttgggaaaacaatgttaaaatatgcgtaatggagtctgtgttgatttttaaaatgacattatgttaaatacaaagctaatataaattttgcaaagttttataagaatttagtccaattttattgaaacaaaaaaggtacatttgaatgaaaattttaatcaatttttaagttaaaatttagtttagcaaatcacattattacgaaaatccttaatttttcttttttttccacactatttagggtttctttatttatctaaaatcatagttgagttttctattgaatgataaaactggtgacgatattttatttaaaggtgttctaaattttgtttaaaggagctacgaaactcgtcattttctcatagtaccatatgaaaagctgcaaatctatagaatttgtgccataaactgtacacgcttatttaccatgatgtacacgggagtgctacctattcatcttctccaacaaccggctaatctctccgagggctgggcaatactccatattgtatcatgtatgtgcacgggagacatataattttcaagcaagcaggctctttaaatggacacgtggcagttttctggacatgtgttactaaatttttagtgtgccatgtggctcaataggaggccagatttttgaccctgaaatcggttatagaagatttatctgatgaaaaatatgaacataataaagtaaggtactcgtcagtacgaatgtaactagtacaaattgtactagtactaaatactaaccaaatggagaaagaaaaggttatacgaagaaaattacatcttatattttaaaacggatgactaataaacaacctcttccgaacttcttgggtgattttaaggatataacctgtgttagcggaaaagctgaaatctctcgctcacgcttggtgtctgcagactgcagctgcctgaattctgctggacgcgctacagtagttagaaacagaggaaacagaggaatgcaaggcagagtggagcgacgtaaggttttggcatgtgtaaccttgcagcttttttgtttttctcctttttttctctctctatgaactgggttataattacaagcaaaccatggccgcctgaaatgcaagatccaataacagctactcgtatgatctggtttcttgccggcaattgagaaaaaaaaaacggctactcaatgactggttgtctggttctatccttaattcccagccggccgtatgcaagcatgcaggatacaatctactacacaacgaaatactgaaagaaagctgctaaaaatagaagtgcacaagattagtaacccaaaatctatcaagctgaatatgcttgcaccacggtcagcctatctaaagtggattaattctaagacacggacacagatcctcagtagttactgcataatactaacaatagttgacatgtggatccatggggtgtgaggcacacctattagctgaggcttccgcatagcagtaaccacaggcaattaccttcactacacatgaggcaatatactaaggttatctttggaaaacgtagattttatagaagtttaacaatttccatgggaggccgaacacaactcttatttgacctttctcatgttttgacgacaagttgtgctctttgtgatattaggagcaatgaaccaagtcacaaggaacctggctgctgagtgggcgaacgatgggatcagagttaactgtgttgcgccaggcttcattcgtactccgctcctatctgaagtaagttccaggttttaattctactaaattatccatggatgtacggctcctttgtagttctataattaatttatattatctcccacttctttttttattttcagagactagcaaaatacccatgctttgttatgggtaaaataaaatatatactaatatgtcatagatataatattttttatcaaatatgctttattattagtttacttattttaatatatagtattaacttgattcaaataaatattagactaccactcattaaatgggaggttcttttgacaacgtacatatgcttgcaagcttacaaatatggcacagttgtcagttagacatgcattttttttctaatgggcctaaatgtgtgcagttcgtggagggtaacgagttggggcgagcagagttcagccgtgttcccatgggccgtctcggtgaaccagaggacatcgcatcgctggtggcgtttctgtcaatgccagcgtcctcctatataaccggtcaggtcatatgcgccgacggcggtcgctgcctttcttgaagtggatggtcctgattcctgaaagatatactaattacctgctacgttgagagatatggaagaattaatggaatttgtctaccacgtgccaaccaggctaggattaatttatctgggaagagcacagattgctgggtgtgtcaaaatgatagaagttaccacatatattttaaataagtctgggaaattaggtagaatagtttgtcgggacgcgtctaatgtgggaattcccatggaacagaagatcgatctggtttctaagactaattaatcttataaaaatattgtgctggaacattaattaatcttttaaaaatagggcgtgacgatagcgtagggcacagcaataggtgttggaagcagagtttgggaatggtggcgtttccgctcgccgcactccgaaaagaggtcagttttgcctcgccacgtccattgtccttccatgtctattgcttaatgcctcagcgacaacaagcgtcttggcagcggctacagggcggtgtgtcgaggcggtgatagaggctttgggatggcaatggtggccagccaatcaacgttggctcagcgactgcaacttgggatgagagtggcatcgcaggcagtgccagcgacattctgagttgatggatccggcctggccagattgccctccaggtgacaaaaggatgcattgaaaacgcaagatgacggtaggcaggatatggcaatgctggcaatggatatgtcatgaagttggatctaggacgcaggtgccacgggatttgagatgtccatgcccgatctgaacgtgtaatcgcaaactacattaaaaggcttcttcttctctgcctccactgaatagcgtcggcaagcaatggcaccagggccaggatgttgacagatcagatcgattggctctagccaatggcaaggacaaggtggcaaaaggagctcatcacatatgatcagaacgtcgtgaggggtgcaagagttcataccgcatatcaagatcgacgcattgcggttttttgtttagcatgactcgttattaaataggagaaggccaagcaatagtcttgtagtcttttcattttcttttttgttttagttttcatgtaacctctggtagtgtgtggatatggagaccagattactatccattatcc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0438700, RefSeq:Os11g0438700