BGIOSGA002569

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Revision as of 10:38, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002569| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002569, complete gene.| tag = P0672D0...")
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Gene Name

BGIOSGA002569

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002569, complete gene.

LocusTag

P0672D08.1

Ensembl Transcript ID

BGIOSGA002569-TA

Ensembl Protein ID

BGIOSGA002569-PA

Length

6223

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:30220..36442

Sequence Coding Region

30220..30387,31128..31226,32228..32331,33907..34715,34799..34921
,35003..35091,35179..35379,35981..36442

Genome Context

<gbrowseImage1> name=IndicaChromosome01:30220..36442 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:30220..36442 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGTCGGCCGCGGGCCAAGACAACGGAGATACCGCTGGGGACTACATCAAGTGGATGTGCGGCGCCGGTGGCCGTGCGGGCGGCGCCATGGCCAACCTCCAGCGCGGCGTTGGCTCCCTCGTCCGTGACATTGGCGACCCCTGCCTCAACCCATCCCCCGTTAAGGGGAGCAAAATGCTCAAACCGGAAAAATGGCACACATGTTTTGATAATGATGGAAAGGTCATAGGTTTCCGTAAAGCCCTAAAATTCATTGTCTTAGGGGGTGTGGATCCCACTATTCGAGCTGAAGTTTGGGAATTTCTTCTTGGCTGCTATGCCTTGAGTAGTACCTCAGAGTATAGGAGGAAACTAAGAGCTGTTAGAAGGGAAAAATATCAAATTTTAGTTAGACAGTGCCAGAGCATGCACCCAAGCATTGGTACAGGTGAGCTTGCTTACGCTGTTGGATCAAAGCTAATGGATGTCAGGACTATGTCAAAAGAAACCCACATTGCAGAAGAAGTTAGCACAAGTCAACAAACTTCACAAAATACAGCTGGCAGTTTAGTAGAAGATTCAGATTATGGCCCCGGTGGTGCACAGCAGTCACAAAAAAGGGAAAGCTGTAGTAAATCAGCTGAACTAGTTGGTTTCAACGTACATAATGATACCTCTCTTTATGATTCTTCCAATTTTATTGTGTCTTCTACAGAAGTGAATAATTGCTCAAAAGATTCTCAGGATTACAATGACATGGGTGAACCAAGATATGACACTGAGACCTTCGATGATTATCCTTCTCTACCTGTTACAAATTTTTTCTCAACTGATGGTGTGGGCAGCAATGGAGTTGATAAAAATCATTGTAGTTTCTCAGTTCCTGAAGATAGATTAAGGCACCGTGATGAACGTATGCACAGCTTCCAAATCAATAATAACATAGATCTCATTATAGAGTCAAATTCATGCTCCAGTGATGTGTTTAGGGCTAGCAACAGTGATTCAGCCATCTTTCACTCAGATGCATACAAGCAGGATAGATGGTTAGATGATAATGGCTATAACAGGGAAGTTATAGATTCCTTGAGGATATCTGATGCACCAGAAGCAGATTTTGTTGATGGAACCAAATCCAACAGTGTGGTTGCCAGCAAAGATCGAGTCTCTGAATGGCTTTGGACACTGCACCGAATTGTGGTTGATGTGGTTAGAACGGATAGTCATCTTGATTTCTATGGAGAATCAAGAAATATGGCTAGGATGTCAGATATACTTGCAGTTTATGCATGGGTTGATCCTTCCACCGGGTATTGCCAAGGTATGAGTGATCTACTTTCACCTTTTGTTGTTCTCTATGAGGATGATGCAGATGCCTTTTGGTGCTTTGAGATGCTACTGAGAAGGATGCGTGAAAATTTCCAGATGGAGGGACCAACAGGAGTTATGAAGCAGTTGCAAGCATTGTGGAAGATCATGGAAATAACTGATGTAGAATTATTTGAACATTTGTCAACAATTGGTGCTGAAAGCCTTCATTTTGCTTTCCGGATGCTGCTAGTGCTTTTTCGTCGAGAGCTGTCCTTTGAGGAGTCACTTAGCATGTGGGAGATGATGTGGGCTGCTGACTTTAATGAAGATGTGATTTTACATTTGGAAGAGAATTGTCTGGAGCCATTGCTGGTAGATATGAGGAATGATTTATCATGTGAGGTGAAAGAAGAGCACCGGGTGAACAGTTACACAAGAAGAAAGTCCAAAAGCAGGAAGCCCCATCATAGAAATGGTGAAATGCGTGTAGCTTGCAACCTTGGAATGAAACCCAATACAAGAAATCCCCTCTGTGGCTTGTCAGGAGCTACTATTTGGGCAAGACATCAGCAGATGCCACATATAAGCACAAATGTGTTAGCAAAGAATGGAGATGATGATCTGCCTATATTCTGCGTAGCAGCAATCCTTGTAATCAATCGCCACAAGATAATTAGAGAAACTCGCTCAATAGATGATGCAATCAAGGCAAGTTTAAGTCACAACTTCCTTTCATATTGTTTACAAACCTCGGATCCATGA</cdnaseq>

Protein Sequence

<aaseq>MSSAAGQDNGDTAGDYIKWMCGAGGRAGGAMANLQRGVGSLVRDIGDPCLNPSPVKGSKMLKPEKWHTCFDNDGKVIGFRKALKFIVLGGVDPTIRAEVWEFLLGCYALSSTSEYRRKLRAVRREKYQILVRQCQSMHPSIGTGELAYAVGSKLMDVRTMSKETHIAEEVSTSQQTSQNTAGSLVEDSDYGPGGAQQSQKRESCSKSAELVGFNVHNDTSLYDSSNFIVSSTEVNNCSKDSQDYNDMGEPRYDTETFDDYPSLPVTNFFSTDGVGSNGVDKNHCSFSVPEDRLRHRDERMHSFQINNNIDLIIESNSCSSDVFRASNSDSAIFHSDAYKQDRWLDDNGYNREVIDSLRISDAPEADFVDGTKSNSVVASKDRVSEWLWTLHRIVVDVVRTDSHLDFYGESRNMARMSDILAVYAWVDPSTGYCQGMSDLLSPFVVLYEDDADAFWCFEMLLRRMRENFQMEGPTGVMKQLQALWKIMEITDVELFEHLSTIGAESLHFAFRMLLVLFRRELSFEESLSMWEMMWAADFNEDVILHLEENCLEPLLVDMRNDLSCEVKEEHRVNSYTRRKSKSRKPHHRNGEMRVACNLGMKPNTRNPLCGLSGATIWARHQQMPHISTNVLAKNGDDDLPIFCVAAILVINRHKIIRETRSIDDAIKASLSHNFLSYCLQTSDP</aaseq>

Gene Sequence

<dnaseqindica>1..168#909..1007#2009..2112#3688..4496#4580..4702#4784..4872#4960..5160#5762..6223#ATGTCGTCGGCCGCGGGCCAAGACAACGGAGATACCGCTGGGGACTACATCAAGTGGATGTGCGGCGCCGGTGGCCGTGCGGGCGGCGCCATGGCCAACCTCCAGCGCGGCGTTGGCTCCCTCGTCCGTGACATTGGCGACCCCTGCCTCAACCCATCCCCCGTTAAGGTTCGCCTACTCCTACTCTAGCTCCATATGGATATGGATTCGATTAGCTGTCTACATTCTATGCCATCAATTTGTTTTCCATCACTTCTCATTATACATCTCCATTGCTCTCTAAATTAAGGCTTCTCTAGCTCTATCCTATATATATACTAGTACTCCGTATATGATTCTGCTTCATCACTTATTTATTCATCATCATACCGTGAAGCTGTATAAGTCCTGTTATTTGTCATTTGGCATATGTTGTATAGATAACACTTTCAGCCCAGGGACTTTCTATTGCCACTTTTATACATATACAATCAACATTTAGCATATGTATATCCTGTACCGCTCAGTTGTACTGCTGCTTTGAAGATAATGTTTGCAAAACATATGAGCTCACACACGAGGCTAGATGCTGCATAGGCTGCACAATGGGGTAGCCATTTTGATACTTCTTAATGCTATTTATGCTGGTCCAAATGTTCATTGGTAGCCTCAGGCAGAGAATTTTAGGGAGATATTATGTCAAACTCCCTGGATTCACTATGATTATACAATATTACCCATTCAATCCATTCAAATAAATTTCCAGGTCAACTCACATATTGTACTGAAAGAAGACTAATTTGCACTAATCATATCCTTTTATCCACCAGAGTATATGAGATTGTCTTCTATATGCAATTTACTTCATATCGACATTTTTCTGCAGAATTGCAAAACTGACGCCTTGTTTTCCATCTGGAATTGTGCAGGGGAGCAAAATGCTCAAACCGGAAAAATGGCACACATGTTTTGATAATGATGGAAAGGTCATAGGTTTCCGTAAAGCCCTAAAATTCATTGTCTTAGGGGTGAGTTAATTGTTTCTTTTGTGCTTCAAAAACTTGTTTTTTCATGTATTTTAGCTGTTGAAGGGTGTGGATTTTTTTTTCAGTCTTAATACATTACCTTTTAGAGCATGATGCCCCACGCGCCATTTGTGAATGTGTAAAATAGGGAAGATCAAATAGAACGTGACAACTGTTTATTTTATTACCATGATCATTGTTCTCTTTGAGAGTGTCTGCTTTGGAAATTTCAAAGAAATTAATGCATATGATTGCGTAGCTCTAGTTTTTCTTAAAAAAATAAGCGGCTAGGCTCTTTATACTATTATGTCACAGAGTGTTTGCCTTTTACCTGTGTATGTAGCTAGGCATAAACATTTGTTTGTGGGTAAATACAAAAAAAAATCCAATGTGTAGAAACTGCTTATAAATACATAAAAGTTACATAAATACATAACTGCTTCAAATAAGCAAGATTTGAACATACCTTCACATAAGCTTTCCCCTAACTGAAAAGCCATTTGGTATAACCTTATAGAAATTAGATATAGTGGAGATGTGGAATGAGCTGCTATCAAGTCTTGTTTCGTGAAAGCAAACTGACACGGTCTCCACAGCAAACACGTCCACAGCTTTGCAATTAGTATCTTTATAGGAAGGTCAATCAGAGTTCATTGGCCATATCTTGGAAAAAAAAGGCATCAGATTTTAGTTTAATTATGTCTATATTTTAGGCATGGATTATTGATCATTTTTGCAGCAGACTAAGTTTAATGCATGTAGTTATTTTCCTTGATTAGTGATTAGTGTTGTTATTTTCTATACACCACTGGCACTGATAGATGTGCTCCATGCTTTGCAATGCATCAAAATTATCATATCGTGCCTAACTCATGCTTTGCACAGATATCATTTTTTTGTGTTCTGGCACTATCTAAAGAATTGTCTATAAACTAGGAACAATAAGATCGCATCGTACTATTCTTCACATTAAAACATTTCTTACCCCCAAAATTGATGTGCAGGGTGTGGATCCCACTATTCGAGCTGAAGTTTGGGAATTTCTTCTTGGCTGCTATGCCTTGAGTAGTACCTCAGAGTATAGGAGGAAACTAAGAGCTGTTAGAAGGTTTGACACTTTCCTGTTTTCAGTACCAGGATACCTTTTTTGTACAAGCATAAGACCGTAAGAGCATAAATGAATTGCATTTATTATCTAGAATAAAATCATGAATGTTACAGTTATGTAGTACTCCCTCCATTCCAATATATAAGGATTTCAAGGATTCAAATTTTGTACCACAATATAAGGATTTCTGCACTGATTCCCATAATACCCATCATTTCAGTGATTCCCAAACCAATCAAATGCATAGAAAGGGAAAAGAATCTTTTGACCTAACCTTGGTATTGGCTAAACAACCTAGAAATCTTTATATTTTGGAAAGGAGGGAGTAGGTATTAATTTGTTTGTTTTTTGTTTATTGTACTAAAACTGAACTTCTAGGTAAATATTCCTATCCTTTACATTTTCCTTGTGTTATTTATAACCATGTGTGCAGAATGGAAAATGATATTAAAAGTTTAAAACAAATGTGTTGCTATGTTTATCTGGAGTACCAATCTCAATCTTTTTCAGGCACTCAAAGTAACTTGATTAGGGTTTAGGGTTTACCCCTTTTCATTGTGCTACCTCCTATACACATTGTTGGGGGGATGAATTGGTGGCATCAGTACTCATAGTTTGTCTATGTAACATCTACTTGTGCTGATGTTGTATGATCCATTTGGTTTAGATGGCTTGATAAGTACCCCGTGCCTGCACACAACAATATGACAGATTATATCAATACATCTAGGGTAGAGGTAAATGAAAGACTGAGATTCTAGATATTGCATACAATTCCTAGGTATTTGTGGTCATGGCCTGTGGGTGATATCGGGTTGGATATGATCCACCAAACCTGGAGCAGAAAATTTCTAAGACTAGTTGCCAGAATAGAATTCTCTTGGAAATTTAACAGTTCCAAACAGCCTGTTCACAAACCCATTATCCATTCACTAGCAGGTGCTGGACAGAAAATATGTTGTTCATAGGGGTTTGAACCTGGGACATTAAATTCTGTAGTACGTGGTAGCCAACAGTGCCAATGGCTCTTTCTTTGTAATGGAAGGATGCGTATTAAAGAAATTAAGTAGATGGGTTGGCATTGCACACTAATTAGTAATGCAAATATACCTTAGTTTATTGTGATCTCTGTAATTATAATTGCATATTTATATTCCTTTTTATGTCTAACTATCGAAGCGTACCTGTGCTATTACAGATAAACTTATTACGTCATATGTTCATGTTGAATTGATTGGCGTGCGATTAGTCCTTTCTGTTTGCATCTGCTTGTTTTATTCACTTGTGACCAACAAATTTATAACCAACATCATGTATGCCATCCATACCAATTGTTGTGCGAGAAATTCTACGTTTTGCCTTTGTTACCGATTCTACTAATTGTTGCTGATGAATGCGAATTCCGTGAAATGCCATCGCACAAGTGTTTTTATTCCTTTGTTTCCATTTCTACGGAGCAGGGCAATCAGTACAGTTCTGAAATTCTTGCTGAGTGTTCTTTCTTTTGAAAGTTTTTACACCTGTGGGACAATTATGGAAGCCTGTAACCTCGTTTATTTCTTCGCTTCTATGCAGGGAAAAATATCAAATTTTAGTTAGACAGTGCCAGAGCATGCACCCAAGCATTGGTACAGGTGAGCTTGCTTACGCTGTTGGATCAAAGCTAATGGATGTCAGGACTATGTCAAAAGAAACCCACATTGCAGAAGAAGTTAGCACAAGTCAACAAACTTCACAAAATACAGCTGGCAGTTTAGTAGAAGATTCAGATTATGGCCCCGGTGGTGCACAGCAGTCACAAAAAAGGGAAAGCTGTAGTAAATCAGCTGAACTAGTTGGTTTCAACGTACATAATGATACCTCTCTTTATGATTCTTCCAATTTTATTGTGTCTTCTACAGAAGTGAATAATTGCTCAAAAGATTCTCAGGATTACAATGACATGGGTGAACCAAGATATGACACTGAGACCTTCGATGATTATCCTTCTCTACCTGTTACAAATTTTTTCTCAACTGATGGTGTGGGCAGCAATGGAGTTGATAAAAATCATTGTAGTTTCTCAGTTCCTGAAGATAGATTAAGGCACCGTGATGAACGTATGCACAGCTTCCAAATCAATAATAACATAGATCTCATTATAGAGTCAAATTCATGCTCCAGTGATGTGTTTAGGGCTAGCAACAGTGATTCAGCCATCTTTCACTCAGATGCATACAAGCAGGATAGATGGTTAGATGATAATGGCTATAACAGGGAAGTTATAGATTCCTTGAGGATATCTGATGCACCAGAAGCAGATTTTGTTGATGGAACCAAATCCAACAGTGTGGTTGCCAGCAAAGATCGAGTCTCTGAATGGCTTTGGACACTGCACCGAATTGGTATGCTCTATTTTTTCTTCACTTCATCATGCAATTACAGTGGTATCTTGTGATTATGTTCTAATTTGCAAAACCTATTACAGTGGTTGATGTGGTTAGAACGGATAGTCATCTTGATTTCTATGGAGAATCAAGAAATATGGCTAGGATGTCAGATATACTTGCAGTTTATGCATGGGTTGATCCTTCCACCGGGTATTGCCAAGGTATATGCATATTTCAGTGGCATCTTTTTTTACTTCCTTTTTGGTTTCTTGATGTGTCTAAATGGGATAAGTTGCTAACAGGTATGAGTGATCTACTTTCACCTTTTGTTGTTCTCTATGAGGATGATGCAGATGCCTTTTGGTGCTTTGAGATGCTACTGAGAAGGATGGTAATTCACATATATTTCAAATTTTGTTGCCTATTAGTTTGGTTTCTATGTTACTCCATGCATAATATGTGCCCTGTTCCACTTCAGCGTGAAAATTTCCAGATGGAGGGACCAACAGGAGTTATGAAGCAGTTGCAAGCATTGTGGAAGATCATGGAAATAACTGATGTAGAATTATTTGAACATTTGTCAACAATTGGTGCTGAAAGCCTTCATTTTGCTTTCCGGATGCTGCTAGTGCTTTTTCGTCGAGAGCTGTCCTTTGAGGAGTCACTTAGCATGTGGGAGGTGTGGCATTTGAAGACACATGTATTATCTTTTTTCAGTTGTTGTTCTTCGTAGGAAAGCTCTAATGGATGTTTGTTTGTCAGCTGGTGTAGGTCTAGGGGATGTTGGTTAAGCCTTTTTTATTTCAAAAATTGTATTACTAGTTAAATATTTCAAATAGTAAAATAGGGTACATCTTCGATTTAGGTTCAAAATCATCAGAGGTGTAGGTAGATGGTTCATTACGATTGTAGTTAATGTTTGTGATATCATGTGGCATGTGAACTTTATACTCCCTCGGGTCACAAATATTTGACGTTTAGGACAAGATGTGGTCAAACTTTTAAAATTTTGACCGTCAATAACAGCTCAAATGCGTAGCTTATAAAAACACAAAAAAAGATATGCGGAGATTTGCCTTGCAAGGTATTAGTGTCATAATATGATACACTTATTAGATTTTATAGTCTTATTCTGATATAAAATTGATGGTCAGTTTCAAAAGTTTTGACCAAATCTTGTTCTAAACATCAAATATTTATGATCGGAGGGAACATTACTTATAAAATGCTCTTCACACTGCAGTCTTGATCTGTTAACCAACCGTGCTTCTTGCTTTCAGATGATGTGGGCTGCTGACTTTAATGAAGATGTGATTTTACATTTGGAAGAGAATTGTCTGGAGCCATTGCTGGTAGATATGAGGAATGATTTATCATGTGAGGTGAAAGAAGAGCACCGGGTGAACAGTTACACAAGAAGAAAGTCCAAAAGCAGGAAGCCCCATCATAGAAATGGTGAAATGCGTGTAGCTTGCAACCTTGGAATGAAACCCAATACAAGAAATCCCCTCTGTGGCTTGTCAGGAGCTACTATTTGGGCAAGACATCAGCAGATGCCACATATAAGCACAAATGTGTTAGCAAAGAATGGAGATGATGATCTGCCTATATTCTGCGTAGCAGCAATCCTTGTAATCAATCGCCACAAGATAATTAGAGAAACTCGCTCAATAGATGATGCAATCAAGGCAAGTTTAAGTCACAACTTCCTTTCATATTGTTTACAAACCTCGGATCCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002569