BGIOSGA002591

From RiceWiki
Revision as of 10:38, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002591| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002591, complete gene.| tag = P0436E0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA002591

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002591, complete gene.

LocusTag

P0436E04.10

Ensembl Transcript ID

BGIOSGA002591-TA

Ensembl Protein ID

BGIOSGA002591-PA

Length

2186

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:229852..232037

Sequence Coding Region

229852..229947,230388..231594,231811..232037

Genome Context

<gbrowseImage1> name=IndicaChromosome01:229852..232037 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:229852..232037 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCTACACCAGGGAGCAGCAGGCCAGCGAATGTTGCTGCTGCTGCTGCGACGGAGGCCAGATTCCACTCCCACCCACCACAGCAGGATAGGCGGAGTGGATGGGCTGGCTGTTTGTCTGGCTTGTCATGTTTCGGATCACAGAAGGGTGGGAAGCGTATAGTTCCTGCAGCACGTGTACCTGATGGGAATGCGTCAACTAGTCGTGGAAATGCACACCAATCTGGTGCCAATTCCAACCAAAGTGCGGCTCTGAATTTATCTCTTCTTGCTCCACCGTCTTCTCCGGTGTCCTTCTCTAATTCTGCAATTCCTTCGACTGCCCAATCACCTAATTGCTTCCTGTCAATATCTGCAAACTCTCCGGGTGGGCCAACATCTAATATGTTTGCTGTTGGGCCATATGCTAACGAGCCTCAGCTTGTCTCACCACCTGTCTTCTCAACTTACACGACCGAGCCTTCCACTGCACCACTGACCCCTCCACCTGAACTAGCTCATGCAACTACTCCCTCCTCTCCAGATGTTCCATATGCGCGGTTTCTTTTGTCATCTATGGATCTGAAAACTGCTGGCAAAGATCACAACATGCCGTACTTATCTACAGCATATTCTGGAGGTTCAGGGCTCCAGGCATCTTATCCGCTTTACCCAGAAAGCCCTTCAAGCAGCCTCATATCACCTGCTTCAGCAACTCCAAGGACTGGTCTTTCATCACCTATACCTGAGCAAGAGGTGCCTACTGCACATTGGAAGACATCTAGGTCTGCCTGCGACACACCATATTCCAGGGCTTCGCCCATCCCTGAGCAAGAGGTCCGCACCGCACATTGGAAGACTTCTAGGTCTGCCTGTGACACACCATATTCCAGGAATTCACCGTCCAATATTTTTGGGCTTGATTCAGCCGCCTCTAGAAACTACATGTTAGATAATAACTTCTTTCGGCCAGCTGCATCTGCCCAGTTCTACCTGGATCAGGCTCAGCAGTCATTTCCATATAATAATGGTGGGAGGATTAGTGTCTCAAAGGACAAACAAGATGTTGAGGAGGTTGAAGCATACAGGGCATCTTTTGGGTTCAGCGCAGATGAAATCGTTACAACTCAAACCTACGTGGAGATACCAGATGCGCTTGATGAGGGGTTCAGTATATCTCCATTTGGGAACAATGCTCCTGCTACTGAGGTGGATAAATCACTCTTCAATGTAAAAGTGATCACAGGCCCAAAGAAATCTACAGAGCAAAAGCTTTCAAATGGGTCTCCACAAAACGTAGTGCACCTGGACATATTCAAAGGAACAAAAGGAGGGGATGTGTGTGAGGATGAAGGGATGGTGAAAGATTGCCATCCATTCAGAAAGGGGAGGGATGAAATATCTCTAAAACCCATAGAAGTGAGGAAGAAAGTTGGGGGTGGACAGTCATGCTCGGATGCAGAGATCGAGTACAGAAGAGCTAGGAGTTTGAGAGAAGCCAATGGAGTTGTGTCATGGCGCAGCACCCTGGCAAGGCAACTACAGTAA</cdnaseq>

Protein Sequence

<aaseq>MAATPGSSRPANVAAAAATEARFHSHPPQQDRRSGWAGCLSGLSCFGSQKGGKRIVPAARVPDGNASTSRGNAHQSGANSNQSAALNLSLLAPPSSPVSFSNSAIPSTAQSPNCFLSISANSPGGPTSNMFAVGPYANEPQLVSPPVFSTYTTEPSTAPLTPPPELAHATTPSSPDVPYARFLLSSMDLKTAGKDHNMPYLSTAYSGGSGLQASYPLYPESPSSSLISPASATPRTGLSSPIPEQEVPTAHWKTSRSACDTPYSRASPIPEQEVRTAHWKTSRSACDTPYSRNSPSNIFGLDSAASRNYMLDNNFFRPAASAQFYLDQAQQSFPYNNGGRISVSKDKQDVEEVEAYRASFGFSADEIVTTQTYVEIPDALDEGFSISPFGNNAPATEVDKSLFNVKVITGPKKSTEQKLSNGSPQNVVHLDIFKGTKGGDVCEDEGMVKDCHPFRKGRDEISLKPIEVRKKVGGGQSCSDAEIEYRRARSLREANGVVSWRSTLARQLQ</aaseq>

Gene Sequence

<dnaseqindica>1..96#537..1743#1960..2186#ATGGCGGCTACACCAGGGAGCAGCAGGCCAGCGAATGTTGCTGCTGCTGCTGCGACGGAGGCCAGATTCCACTCCCACCCACCACAGCAGGATAGGGTATTACTATATCTTCTTGCTGCTCATGCAATTGCTTCATCTTTTCTTTTCTGTTGCTTTTTTTCGTACTACTTGTTACCTGCAATTGCTACCTCCTGTCGACCTTACAACCTTTTCCTACTCACTCAGTACCAACTGTTCGTACTGTCTCCGTGCTGGTTGCAACTTGCAATTGGGCCATCTTAAACTCGTTGTAGCATGCAAGGATGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTAGTTCCTTATTCATTCCTGGAGTTAACTTTATGTGTCTTCATAAAATCAAGCTGGAATGCTGGATGATTCCCCCCCCCCCCCCCCTATTTCTTGCAACAACTAATAACTTTCTACATTTATCAGCGGAGTGGATGGGCTGGCTGTTTGTCTGGCTTGTCATGTTTCGGATCACAGAAGGGTGGGAAGCGTATAGTTCCTGCAGCACGTGTACCTGATGGGAATGCGTCAACTAGTCGTGGAAATGCACACCAATCTGGTGCCAATTCCAACCAAAGTGCGGCTCTGAATTTATCTCTTCTTGCTCCACCGTCTTCTCCGGTGTCCTTCTCTAATTCTGCAATTCCTTCGACTGCCCAATCACCTAATTGCTTCCTGTCAATATCTGCAAACTCTCCGGGTGGGCCAACATCTAATATGTTTGCTGTTGGGCCATATGCTAACGAGCCTCAGCTTGTCTCACCACCTGTCTTCTCAACTTACACGACCGAGCCTTCCACTGCACCACTGACCCCTCCACCTGAACTAGCTCATGCAACTACTCCCTCCTCTCCAGATGTTCCATATGCGCGGTTTCTTTTGTCATCTATGGATCTGAAAACTGCTGGCAAAGATCACAACATGCCGTACTTATCTACAGCATATTCTGGAGGTTCAGGGCTCCAGGCATCTTATCCGCTTTACCCAGAAAGCCCTTCAAGCAGCCTCATATCACCTGCTTCAGCAACTCCAAGGACTGGTCTTTCATCACCTATACCTGAGCAAGAGGTGCCTACTGCACATTGGAAGACATCTAGGTCTGCCTGCGACACACCATATTCCAGGGCTTCGCCCATCCCTGAGCAAGAGGTCCGCACCGCACATTGGAAGACTTCTAGGTCTGCCTGTGACACACCATATTCCAGGAATTCACCGTCCAATATTTTTGGGCTTGATTCAGCCGCCTCTAGAAACTACATGTTAGATAATAACTTCTTTCGGCCAGCTGCATCTGCCCAGTTCTACCTGGATCAGGCTCAGCAGTCATTTCCATATAATAATGGTGGGAGGATTAGTGTCTCAAAGGACAAACAAGATGTTGAGGAGGTTGAAGCATACAGGGCATCTTTTGGGTTCAGCGCAGATGAAATCGTTACAACTCAAACCTACGTGGAGATACCAGATGCGCTTGATGAGGGGTTCAGTATATCTCCATTTGGGAACAATGCTCCTGCTACTGAGGTGGATAAATCACTCTTCAATGTAAAAGTGATCACAGGCCCAAAGAAATCTACAGAGCAAAAGCTTTCAAATGGGTCTCCACAAAACGTAGTGCACCTGGACATATTCAAAGGTAATTCCCCTGAGCTTTTGACTTGGATCATTCAGTTGTAGTTGAACATATAATAGAATGAGGCGTTTTGGTTTGTCTTGTGAATTGGTGGGATAAACAGTTGGTTTTTAATGCAAGATGTAAAGTTGAAGTCTAGTAGTGTTTGTTTTGCAATTTGCAACGCTCATTTTTGATGCTATCTTATCTTCTGTCTCTGCGCTCTTTATTTTGTTACAGGAACAAAAGGAGGGGATGTGTGTGAGGATGAAGGGATGGTGAAAGATTGCCATCCATTCAGAAAGGGGAGGGATGAAATATCTCTAAAACCCATAGAAGTGAGGAAGAAAGTTGGGGGTGGACAGTCATGCTCGGATGCAGAGATCGAGTACAGAAGAGCTAGGAGTTTGAGAGAAGCCAATGGAGTTGTGTCATGGCGCAGCACCCTGGCAAGGCAACTACAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002591