BGIOSGA002593

From RiceWiki
Revision as of 10:38, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002593| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002593, complete gene.| tag = OsI_000...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA002593

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002593, complete gene.

LocusTag

OsI_00036

Ensembl Transcript ID

BGIOSGA002593-TA

Ensembl Protein ID

BGIOSGA002593-PA

Length

1136

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:242773..243908

Sequence Coding Region

242773..243330,243447..243908

Genome Context

<gbrowseImage1> name=IndicaChromosome01:242773..243908 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:242773..243908 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACCATCGACCTGCAGCTTCCGGCGGCGGCGTGCGGTGATCATCACACAGCAGCAGGGGCAGGGCTGCCGCCGGGATTCCGGTTCCACCCGACGGACGAGGAGCTCCTCCTCCACTACCTCGGCAAGCGCGCCGCGGCGGCGCCCTGCCCGGCACCGGTGATCGCCGAGGTGGACATTTACAAGTACAACCCGTGGGAGCTGCCGGCCATGGCGGTGTTCGGGGAGTCGGATGGCGAGTGGTACTTCTTCAGCCCACGCGACCGCAAGTACCCCAACGGCGTCCGTCCCAACCGCGCCGCCGGCTCCGGCTACTGGAAGGCCACCGGAACCGACAAGCCCATCTCCATCTCGGAGACGCAGCAGACGGTACTGCTGGGCGTGAAGAAGGCCCTCGTCTTCTACCGCGGTCGCCCGCCCAAGGGCACCAAGACCAGCTGGATCATGCACGAGTACCGCCTCGCCAACGCCGCCGCCTCCTCCTCCTCCTCCTATACTAGTAACATGAAGCAGCTGGCCTCATCATCATCGTCCAGCTCCAGCAGCGCCAGCATGAGGCTGGACGAGTGGGTGCTGTGCAGAATCTACAAGAAGAAGGAGGCCAACCAGCAGCTGCAGCACTACATCGACATGATGATGGACGACGACAACGATGACGAACACAACCTGCAGGTGCAGCAGCAGCAGCAGCAGCAGGCTCAAAGCCACCGGATGCCAAGGCCTCCATCCATCTCAGACTACCTTCTCGACTACTCCGACGACCTCCCGCCGTCCACCGATCAGACGCCATCTCTGCACCTTGGATTCACGGCGGTGAACGAGGGCAACAACAAGAGGCACAAAACTATGGAGGAATATTATTCTATTTCCATTTCCACTGCAGATATGCTGCATGCGTCGTCGTCCACGTCCAACAACAAGTCGACGCAAATCAACTTCTCCTCCATATTTGAGCCGCAGACGCCTGCAGCTGCGGGCCATCAGCTGATGTCTTCTCACAACGACGACACATCCATATGA</cdnaseq>

Protein Sequence

<aaseq>MTIDLQLPAAACGDHHTAAGAGLPPGFRFHPTDEELLLHYLGKRAAAAPCPAPVIAEVDIYKYNPWELPAMAVFGESDGEWYFFSPRDRKYPNGVRPNRAAGSGYWKATGTDKPISISETQQTVLLGVKKALVFYRGRPPKGTKTSWIMHEYRLANAAASSSSSYTSNMKQLASSSSSSSSSASMRLDEWVLCRIYKKKEANQQLQHYIDMMMDDDNDDEHNLQVQQQQQQQAQSHRMPRPPSISDYLLDYSDDLPPSTDQTPSLHLGFTAVNEGNNKRHKTMEEYYSISISTADMLHASSSTSNNKSTQINFSSIFEPQTPAAAGHQLMSSHNDDTSI</aaseq>

Gene Sequence

<dnaseqindica>1..558#675..1136#ATGACCATCGACCTGCAGCTTCCGGCGGCGGCGTGCGGTGATCATCACACAGCAGCAGGGGCAGGGCTGCCGCCGGGATTCCGGTTCCACCCGACGGACGAGGAGCTCCTCCTCCACTACCTCGGCAAGCGCGCCGCGGCGGCGCCCTGCCCGGCACCGGTGATCGCCGAGGTGGACATTTACAAGTACAACCCGTGGGAGCTGCCGGCCATGGCGGTGTTCGGGGAGTCGGATGGCGAGTGGTACTTCTTCAGCCCACGCGACCGCAAGTACCCCAACGGCGTCCGTCCCAACCGCGCCGCCGGCTCCGGCTACTGGAAGGCCACCGGAACCGACAAGCCCATCTCCATCTCGGAGACGCAGCAGACGGTACTGCTGGGCGTGAAGAAGGCCCTCGTCTTCTACCGCGGTCGCCCGCCCAAGGGCACCAAGACCAGCTGGATCATGCACGAGTACCGCCTCGCCAACGCCGCCGCCTCCTCCTCCTCCTCCTATACTAGTAACATGAAGCAGCTGGCCTCATCATCATCGTCCAGCTCCAGCAGCGCCAGCATGAGGGTACGTACGTGCTACGGTGCTAGTGCTAACTACATATATATATATCCTCTTCCATATACTCCATCCACTGATCGATATATATATATATGCGCAATTATATTCATGCGCGTACGCAGCTGGACGAGTGGGTGCTGTGCAGAATCTACAAGAAGAAGGAGGCCAACCAGCAGCTGCAGCACTACATCGACATGATGATGGACGACGACAACGATGACGAACACAACCTGCAGGTGCAGCAGCAGCAGCAGCAGCAGGCTCAAAGCCACCGGATGCCAAGGCCTCCATCCATCTCAGACTACCTTCTCGACTACTCCGACGACCTCCCGCCGTCCACCGATCAGACGCCATCTCTGCACCTTGGATTCACGGCGGTGAACGAGGGCAACAACAAGAGGCACAAAACTATGGAGGAATATTATTCTATTTCCATTTCCACTGCAGATATGCTGCATGCGTCGTCGTCCACGTCCAACAACAAGTCGACGCAAATCAACTTCTCCTCCATATTTGAGCCGCAGACGCCTGCAGCTGCGGGCCATCAGCTGATGTCTTCTCACAACGACGACACATCCATATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002593