BGIOSGA002720

From RiceWiki
Revision as of 10:40, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002720| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002720, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA002720

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002720, complete gene.

LocusTag

OSJNBA0083M16.31

Ensembl Transcript ID

BGIOSGA002720-TA

Ensembl Protein ID

BGIOSGA002720-PA

Length

1876

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:2256470..2258345

Sequence Coding Region

2256470..2256555,2256651..2256726,2256828..2256880,2256972..2257459,2257555..2257715
,2257806..2258103,2258191..2258345

Genome Context

<gbrowseImage1> name=IndicaChromosome01:2256470..2258345 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:2256470..2258345 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGAAGCGGCTTCACGACGGCTACGGACAGGAGGACCAGCCCGACGACAAGCGTGTGCGCCGCATGCCGTCCTTCTCGACGGTGATCCGTGAGGCCTTGATGGTGAAGCAGATGCAGACTCTGTTCGTCGCACTGGAGCCACTTCTCCGTAGAGTGGTGCAGGAGGAGCTCCAGGCAGGTCTCGTGCGCAGCCCGCGTTACATCGAGAGGATGTCGCCTGAGACGCCGCCGGCTCAGCCGCCGATGTGGAAGCTGGCGTTCCGGTTCAAGCCGCAGCTCCCGATCTTCACCGGGAGCAAGATCGAGGACGTGAACGGCAACCCACTGGAGATCATCCTCATCGACGTCGACACCGGCGCGCCGGCGACGATCTCGCAGCCTCTGCGCGTCGAGGTCGTCCCGGTCCTGGGCGACTTCCCGCCGGACGACCGCGAGCACTGGACGGCGGAGGAGTTCCAGCAGAGGGGCATCGTGAAGGAGCGCTCCGGCAAGCGCCCGCTCCTCACCGGCGACGTCAGCCTCACCATGCGCGACGGCTGCGTCGCCGTGAACGAGCTCCAGTTCACGGACAACTCCTCCTGGGTTCGCTGCCGCAGGTTCCGCATCGGCGTCCGCGTCGTGCCGGGCAGCTACGACGGCCCAAGAATCGGCGAGGCCATGACCGAGCCCTTCGTCGTCAGAGACCACCGCGGCGAACTGTACAGGAAGCACTACCCTCCCGTTCTTGGCGACGATGTCTGGAGGCTTGAGAAGATTGGCAAGGAGGGTGCCTTCCACAGGAAGCTGACGCAGCACAACGTCAGGAACGTGCAGGAGTTCTTGCGGCTGCTCACGGTTAAGCCGGACGAGCTGCGCGCTATCATGGGCGACGGCATGACCGATCGCATGTGGGAGGTGACGACGAGCCACGCCAAGAAGTGCGTCCCCGGCGACAAGGTGTACATGTACAGCACGCAGCACGGCACCGTCTACGTCAACTCCATCTTCGAGCTCGTGAAGGTCGAGCTCGCCGGCGTGGAGTACCAGCTGCACCAGCTGAACAGGGGTCAGAAGGCGTTCGTGCATCAGCTGCTGCTGGCGGCGTACGAGCAGCGAAACAACCTCCAAGAGGCCGACGCCATGGCGCTCCACTGCAACGACGTTCCTCTGCTGCAGAATGCAGCGGAGATAACTATCCCGGCGCTTGGAGACACGCAGCTGTGGATTCAGAACAGTCTCAACAGCCAAGAAATCGACTTCCAGGTCGACGAGATCCCCCAAGCTAACTTTGCGCTTCAGTGGACTGGCCAAATGTACAACATTTCAGGCTAA</cdnaseq>

Protein Sequence

<aaseq>MAAKRLHDGYGQEDQPDDKRVRRMPSFSTVIREALMVKQMQTLFVALEPLLRRVVQEELQAGLVRSPRYIERMSPETPPAQPPMWKLAFRFKPQLPIFTGSKIEDVNGNPLEIILIDVDTGAPATISQPLRVEVVPVLGDFPPDDREHWTAEEFQQRGIVKERSGKRPLLTGDVSLTMRDGCVAVNELQFTDNSSWVRCRRFRIGVRVVPGSYDGPRIGEAMTEPFVVRDHRGELYRKHYPPVLGDDVWRLEKIGKEGAFHRKLTQHNVRNVQEFLRLLTVKPDELRAIMGDGMTDRMWEVTTSHAKKCVPGDKVYMYSTQHGTVYVNSIFELVKVELAGVEYQLHQLNRGQKAFVHQLLLAAYEQRNNLQEADAMALHCNDVPLLQNAAEITIPALGDTQLWIQNSLNSQEIDFQVDEIPQANFALQWTGQMYNISG</aaseq>

Gene Sequence

<dnaseqindica>1..86#182..257#359..411#503..990#1086..1246#1337..1634#1722..1876#ATGGCGGCGAAGCGGCTTCACGACGGCTACGGACAGGAGGACCAGCCCGACGACAAGCGTGTGCGCCGCATGCCGTCCTTCTCGACGTGAGCTAGCTTTCTTCTCCTTCGCTATTGCTCTGCTTGTGATCGTTCAAGGGGAGATTGGTTCTAATTAACATGTGTTTGCTTTTCGATTCCAGGGTGATCCGTGAGGCCTTGATGGTGAAGCAGATGCAGACTCTGTTCGTCGCACTGGAGCCACTTCTCCGTAGAGTGGTAAGCAGGCAGGAGATGATCGATTTGCAGTTGCACAGAGCTTGTTCCAACTGTTCTTGGATTGCAGTGTGCTAATTGCTCTGTTTCTTTGTTACTTGCAGGTGCAGGAGGAGCTCCAGGCAGGTCTCGTGCGCAGCCCGCGTTACATCGAGAGGTGAGAATTCACAACGAAATCCGCAAGAACAGCGTCGAACAGCAGCAAGAAATCCGAATGATGTATAACATTGTTTGATCTGTATTGTCAGGATGTCGCCTGAGACGCCGCCGGCTCAGCCGCCGATGTGGAAGCTGGCGTTCCGGTTCAAGCCGCAGCTCCCGATCTTCACCGGGAGCAAGATCGAGGACGTGAACGGCAACCCACTGGAGATCATCCTCATCGACGTCGACACCGGCGCGCCGGCGACGATCTCGCAGCCTCTGCGCGTCGAGGTCGTCCCGGTCCTGGGCGACTTCCCGCCGGACGACCGCGAGCACTGGACGGCGGAGGAGTTCCAGCAGAGGGGCATCGTGAAGGAGCGCTCCGGCAAGCGCCCGCTCCTCACCGGCGACGTCAGCCTCACCATGCGCGACGGCTGCGTCGCCGTGAACGAGCTCCAGTTCACGGACAACTCCTCCTGGGTTCGCTGCCGCAGGTTCCGCATCGGCGTCCGCGTCGTGCCGGGCAGCTACGACGGCCCAAGAATCGGCGAGGCCATGACCGAGCCCTTCGTCGTCAGAGACCACCGCGGCGAACGTACGTTTCGTCAGAGACCATCACGAGTTCACCACACTACATCTCTCTCCTCTTCTCTGAATTGTTTCCCTGACGATTTGGCGTGTGATTTGCAGTGTACAGGAAGCACTACCCTCCCGTTCTTGGCGACGATGTCTGGAGGCTTGAGAAGATTGGCAAGGAGGGTGCCTTCCACAGGAAGCTGACGCAGCACAACGTCAGGAACGTGCAGGAGTTCTTGCGGCTGCTCACGGTTAAGCCGGACGAGCTGCGCGCTGTAAGCTTCCACCGCATTTGATCTCGCAAATCACAATGCTTCTCCAACGCATGGGTGGATTCTGAACATTGCTCTGTTCTTTGTGTTCAGATCATGGGCGACGGCATGACCGATCGCATGTGGGAGGTGACGACGAGCCACGCCAAGAAGTGCGTCCCCGGCGACAAGGTGTACATGTACAGCACGCAGCACGGCACCGTCTACGTCAACTCCATCTTCGAGCTCGTGAAGGTCGAGCTCGCCGGCGTGGAGTACCAGCTGCACCAGCTGAACAGGGGTCAGAAGGCGTTCGTGCATCAGCTGCTGCTGGCGGCGTACGAGCAGCGAAACAACCTCCAAGAGGCCGACGCCATGGCGCTCCACTGCAACGACGTTCCTCTGCTGCAGAGTAAGTATCGGTTACTACAGATTTGCTCAACATCGAGCGTTAGTTTCGCAGTGTTCTCATCTGTTCTTGTGCTTGAACAATCTGCAGATGCAGCGGAGATAACTATCCCGGCGCTTGGAGACACGCAGCTGTGGATTCAGAACAGTCTCAACAGCCAAGAAATCGACTTCCAGGTCGACGAGATCCCCCAAGCTAACTTTGCGCTTCAGTGGACTGGCCAAATGTACAACATTTCAGGCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002720