BGIOSGA002733

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Revision as of 10:40, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002733| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002733, complete gene.| tag = P0443D0...")
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Gene Name

BGIOSGA002733

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002733, complete gene.

LocusTag

P0443D08.39

Ensembl Transcript ID

BGIOSGA002733-TA

Ensembl Protein ID

BGIOSGA002733-PA

Length

4640

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:2422177..2426816

Sequence Coding Region

2422177..2422936,2424223..2424258,2424457..2425687,2426609..2426816

Genome Context

<gbrowseImage1> name=IndicaChromosome01:2422177..2426816 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:2422177..2426816 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACACGCCATTGCTGCTGCTGCTTCCCTTCCTGGCGGCATGTCTGCTCGCGCCGCGGCACGCGGCGGAGGCGGCCGTCACGAGCTGCGCGCCGAGGAGGTGCGGGAACGTGACCATCGCCTACCCGTTCTGGCTGCCGGACTCATCGCCGCCGCCGTCGTCGTCGTCCGCGCCGTGCGGCCCCGCGGCGTTCCAGGTGAACTGCGACAACGGCAGCCGCGCGTCGCTGGCCCGCTCCTTCCGCAGCGGGTACAAGATCCTCGGCGTGTCGTACGCCAACCGCACCGTCGTCGTCGCCAACGACAACGTCCAGACCGACGCCAGCGGCTGCCCGGTGCCCAAGATCGACGTCTCCGCCAGCCTCACCCTCGCGCCGTTCACCGCCAGCCCGGCCAACAGCCAGCTCGTCTTCCTCTTCAACTGCACCAGCAGCAGCAGGCCGCCGCCGGCAGGGTTCGTCAACGTCACGTGCCCGGGAGCGAAGGCCGTGGTCCGGCTCGACACGAGCTACAACAACACCGCCGCCAGAGTGGTCGCCGGCGGCTGCGACTACGCGGCCGTTCCGGTGGTCGGCGTGCCGGGGGCGAGCCCGACGGACTACCCGCAGCTGCTCCGGGGAGGCTACATGCTGGAGTGGAGGGCGCCCGCCGGCGACTGCATGGCGTGCAATGCCAGCGGCGGCCAGTGCGGCTACGACGCCGACACGGAGGCGTTCGCCTGCATCTGCTCCGACGGCTCATCGCGCCCGGGGATATGTGATGCAAAGAAGTCCGGGAACAAGATCATCCTGATAGTGTCACTGTCGATCTGTGCGACTGGGTTGGTGCTATTGGCATGCATCGCCATCGTCTACAAGTGTCGCCGACGTATGCAAAATCGTTTCAGTTTTCTGAACGCCATGGACGGTGCAAGCAGAACGGATACTGCAAAGGTGGAGAAGCTGCTGCAGAGTTACGGATCCCTAGCTCCCCGGAGGTTCAGGTACTCGGAGCTGAAGAAGATAACGAAGTCCTTCAGCCAGCGGCTCGGCGAGGGCGGCTACGGCACGGTGTTCAGCGGCACGCTCGCCGACGGCCGCGCCGTCGCCGTCAAGTTCCTCCACCACTCCAAGCCCAACGGCGAGGAGTTCCTCAACGAGGTGGTCAGCATTGGCCGGACGAGCCATGTCAACATCGTCTCCCTGCTCGGCTTCTGCCTCGAGGGCTCCAAGCGAGCCCTCGTCTACGAGTACATGCCCAATGGCTCGCTGGACAAGTACATCTACTCGACGTCGGCGGCGGCGGCGGCGGAGGCGGAGGAGGCGGAGGAGGCGGAGGCGACGGCGAGCCCTGACAGGGATGTTCTGGGGTGGAAGGTGCTGCAGGAGATCGCCGTCGGCGTGGCGCGGGGGCTGGAGTACCTGCACGACGGGTGCAACACGCGGATCATCCACTTCGACATCAAGCCGCACAACGTGCTCCTCGACGAGGGATTCCGGCCCAAGATCGCCGACTTCGGGATGGCGAAGCTGTGCAACCCAAAGGAGAGCATCCTGTCGATGGCGGACACGAGGGGGACGATAGGGTTCATCGCGCCGGAGGTGTTCTCCCGCGGGTTCGGCGACATCTCGACCAAGTCCGACGTGTACAGCTACGGGATGCTGCTGCTGGAGATGGTCGGCGGCGGGAGCAACGTCAAGGCCTACGCCGAGAAGGGCGCCAGCGGCACGTTCTTCCCGCTCTGGGTCTACGACCACCTGCTCGAGGACGGCGGCGTGCTGCAGAGCGTCGCCGCCGCCGCCGCCGCCACGGCCGGCGGCGGCGCCGGATCACCGGGAGGCGAGGAGATCGCGAGGAAGATGGCGCTGATCGGGCTGTGGTGCATACAGACCGTGCCGGCGAACAGGCCGTCGATGGGCAAGGTGCTGGAGATGCTGGAGAGAAGCGTCCACGAGCTCGCCATGCCGCCGCGGCCGTACCACTCGAACTCGTCGTCCCCGTCGCGGCCGTCGAGCTACCCCTCCTCTGCCTCGGATTTCACGCAGCGCTGCGGAGCTCGGCACGTCCGCTGTGGTTCTGAGGTGCTCCCATGGATTATGGATACGTCAGTCTCAGGGACGCCGTCGGCGCCGGATCGGAGGATTAGAGTCGCCAGGCTATGTCGAAAATTCTCCGCGTCTCGAATCGATCGAGCCGATAGGGAGCCTGAAAGGAGAATCAGCGTGTGCCCTCGAGCCGAGCCTACGCTCTCCTAG</cdnaseq>

Protein Sequence

<aaseq>MDTPLLLLLPFLAACLLAPRHAAEAAVTSCAPRRCGNVTIAYPFWLPDSSPPPSSSSAPCGPAAFQVNCDNGSRASLARSFRSGYKILGVSYANRTVVVANDNVQTDASGCPVPKIDVSASLTLAPFTASPANSQLVFLFNCTSSSRPPPAGFVNVTCPGAKAVVRLDTSYNNTAARVVAGGCDYAAVPVVGVPGASPTDYPQLLRGGYMLEWRAPAGDCMACNASGGQCGYDADTEAFACICSDGSSRPGICDAKKSGNKIILIVSLSICATGLVLLACIAIVYKCRRRMQNRFSFLNAMDGASRTDTAKVEKLLQSYGSLAPRRFRYSELKKITKSFSQRLGEGGYGTVFSGTLADGRAVAVKFLHHSKPNGEEFLNEVVSIGRTSHVNIVSLLGFCLEGSKRALVYEYMPNGSLDKYIYSTSAAAAAEAEEAEEAEATASPDRDVLGWKVLQEIAVGVARGLEYLHDGCNTRIIHFDIKPHNVLLDEGFRPKIADFGMAKLCNPKESILSMADTRGTIGFIAPEVFSRGFGDISTKSDVYSYGMLLLEMVGGGSNVKAYAEKGASGTFFPLWVYDHLLEDGGVLQSVAAAAAATAGGGAGSPGGEEIARKMALIGLWCIQTVPANRPSMGKVLEMLERSVHELAMPPRPYHSNSSSPSRPSSYPSSASDFTQRCGARHVRCGSEVLPWIMDTSVSGTPSAPDRRIRVARLCRKFSASRIDRADREPERRISVCPRAEPTLS</aaseq>

Gene Sequence

<dnaseqindica>1..760#2047..2082#2281..3511#4433..4640#ATGGACACGCCATTGCTGCTGCTGCTTCCCTTCCTGGCGGCATGTCTGCTCGCGCCGCGGCACGCGGCGGAGGCGGCCGTCACGAGCTGCGCGCCGAGGAGGTGCGGGAACGTGACCATCGCCTACCCGTTCTGGCTGCCGGACTCATCGCCGCCGCCGTCGTCGTCGTCCGCGCCGTGCGGCCCCGCGGCGTTCCAGGTGAACTGCGACAACGGCAGCCGCGCGTCGCTGGCCCGCTCCTTCCGCAGCGGGTACAAGATCCTCGGCGTGTCGTACGCCAACCGCACCGTCGTCGTCGCCAACGACAACGTCCAGACCGACGCCAGCGGCTGCCCGGTGCCCAAGATCGACGTCTCCGCCAGCCTCACCCTCGCGCCGTTCACCGCCAGCCCGGCCAACAGCCAGCTCGTCTTCCTCTTCAACTGCACCAGCAGCAGCAGGCCGCCGCCGGCAGGGTTCGTCAACGTCACGTGCCCGGGAGCGAAGGCCGTGGTCCGGCTCGACACGAGCTACAACAACACCGCCGCCAGAGTGGTCGCCGGCGGCTGCGACTACGCGGCCGTTCCGGTGGTCGGCGTGCCGGGGGCGAGCCCGACGGACTACCCGCAGCTGCTCCGGGGAGGCTACATGCTGGAGTGGAGGGCGCCCGCCGGCGACTGCATGGCGTGCAATGCCAGCGGCGGCCAGTGCGGCTACGACGCCGACACGGAGGCGTTCGCCTGCATCTGCTCCGACGGCTCATCGCGCCCGGGGATATGTGGTATGTGTAAATCTATCTGTTCTTTGTGCTAAATTCGTTCAGTTTTTTTTCCCTGAATTTGATTATTGGGAAATACATAACTATTACTCAAATTAAATTAGTTAGAGACTTGAGAGTATTAAAATTCAAATTAACTATTTATTGCTTGATCAGCACAAGCAGTAGTTAGGATCAACGAACATGTAGTAGTAGTTCGTATTTGCGTGGTCGTGCCAAAAACCAAGGTGGTTAGAACTGACAGAAAGATTTAGCTATTTTGGCTTTTGAACGTGATTTATATGGAGGGTAACAAACTAACAATGGTTGTCAATCGGTGACCGTACGTTCACGGTATCTAAAATTCTTTAAAAATTCCTAAGGATGCTCCCTTTTTCTGATAACGAAAAAAAAGTGTAAATTGTGATTCTGGAACTGAAAAAAGGTGATCTCTTTATGCATGTTTTAATTAGGTGAAGTGTACTTTCAGGACAAGGCTCTTGATAGGACTAGCAATAGTGGAAGTACAATAGAACTGGAATGACTTTTTGCACGGGCTTGGACTAATTAAATTACTGAATCAACATATGGTGGCTGTCACGATCTCATCGTATGAAACAATCTTTTGCCGAGAACCAATAATGGACTCCACATAAGCCCCAGTGTGATCTGTGAAGCTATACTTTAGCTACAAGTAGCCGGAATTTCACGTTCTCCGATCTCAACAACGTTTACATGTAGAATACGTATACAGCCAGCACGTGTGGTTGGTTAGTTGTTAGTGCTTACTTATCGACTTTGACTTTGAAATCACAATGATAGGAGCAAAATGGTCAACTAAAACTAACTTTTGTGTCCGAAAAGAGACGATTTTGTTTGATTTCATCTGATTATTTTGATCATTTTGTTCATCATGTCTGAATCAAACGAGATATGTTGCTGCTCGCGGCGGCTGTTGCTGCACTCTCCTGTAGCTGGTTAGGTCAGATACATGTTGGTCTCTGTCCACTGTACAAATACTTCGAATAAAGCAACGTCGTACATATGTACAAATATACGATGATATCTGTTGTCTGAATTGTTCCTAAGTAATAGTTCAGACACCTTAATTGGTCCAACCAGTTTCAATTAGTCATCAGGAAATCAATGACGCAACTGTGTGTGGAACAATTAGTCTTTGATCAGGAACTGTTTCTTTGATTAATCTCGGAAATAAATTAATGCTCGTTCAATGTATTTCAATTGGTTGGAATAGACTGGCGATATTTTGTACATATGTTGACTAAAATGAAATGATTCTTCCCTTTCAGATGCAAAGAAGTCCGGGAACAAGATCATCCTGATAGGTATGCATCCGCTTCAGTCTTCAATTCTTGCTTAACTAGTCCAACAAAATAATATAATTCAACTTGTTTTTATTCTTCGTATATGTCATGACGATCAATTGTTTCTTCAATAATGATGTCATGATCAATTATCTAGATAAATTTACCACTTGGTAGTAATTACTAATCTATACTAATTGTTTGCTTCGTCGCTTTCAGTGTCACTGTCGATCTGTGCGACTGGGTTGGTGCTATTGGCATGCATCGCCATCGTCTACAAGTGTCGCCGACGTATGCAAAATCGTTTCAGTTTTCTGAACGCCATGGACGGTGCAAGCAGAACGGATACTGCAAAGGTGGAGAAGCTGCTGCAGAGTTACGGATCCCTAGCTCCCCGGAGGTTCAGGTACTCGGAGCTGAAGAAGATAACGAAGTCCTTCAGCCAGCGGCTCGGCGAGGGCGGCTACGGCACGGTGTTCAGCGGCACGCTCGCCGACGGCCGCGCCGTCGCCGTCAAGTTCCTCCACCACTCCAAGCCCAACGGCGAGGAGTTCCTCAACGAGGTGGTCAGCATTGGCCGGACGAGCCATGTCAACATCGTCTCCCTGCTCGGCTTCTGCCTCGAGGGCTCCAAGCGAGCCCTCGTCTACGAGTACATGCCCAATGGCTCGCTGGACAAGTACATCTACTCGACGTCGGCGGCGGCGGCGGCGGAGGCGGAGGAGGCGGAGGAGGCGGAGGCGACGGCGAGCCCTGACAGGGATGTTCTGGGGTGGAAGGTGCTGCAGGAGATCGCCGTCGGCGTGGCGCGGGGGCTGGAGTACCTGCACGACGGGTGCAACACGCGGATCATCCACTTCGACATCAAGCCGCACAACGTGCTCCTCGACGAGGGATTCCGGCCCAAGATCGCCGACTTCGGGATGGCGAAGCTGTGCAACCCAAAGGAGAGCATCCTGTCGATGGCGGACACGAGGGGGACGATAGGGTTCATCGCGCCGGAGGTGTTCTCCCGCGGGTTCGGCGACATCTCGACCAAGTCCGACGTGTACAGCTACGGGATGCTGCTGCTGGAGATGGTCGGCGGCGGGAGCAACGTCAAGGCCTACGCCGAGAAGGGCGCCAGCGGCACGTTCTTCCCGCTCTGGGTCTACGACCACCTGCTCGAGGACGGCGGCGTGCTGCAGAGCGTCGCCGCCGCCGCCGCCGCCACGGCCGGCGGCGGCGCCGGATCACCGGGAGGCGAGGAGATCGCGAGGAAGATGGCGCTGATCGGGCTGTGGTGCATACAGACCGTGCCGGCGAACAGGCCGTCGATGGGCAAGGTGCTGGAGATGCTGGAGAGAAGCGTCCACGAGCTCGCCATGCCGCCGCGGCCGTACCACTCGAACTCGTCGTCCCCGTCGCGGCCGTCGAGCTACCCCTCCTCTGCCTCGGATTTCACGCAGCGGTCAGTGTCGTGTTGATCAGTTGCTGATCACTCTGTTTTTTTTTCTGATAACGCTGAATTCCATATGATCAATCGCTGACGAAGATCGATATGCGTTTTTGTCGAGCAGATCAAGGTTATCAACACCGGGAAGCACAGCGTGAAAAGTGGCGATGGAATGACTATACTTGAAGCAGACAACTGGCTAGTAGACTGTAAATTAAAGAAAACCAGAGTGGGAGCTTTGGTTTTGTATGTAGAGCAGATTAGCAAGAACAACAAAATTAGACGTTATTACTGTTTGAATCATTAATTCGTTCTCTTATGGTTTTCTGTGGAAATCATGTACTACTCCTATTCAGTTTTAGTTTAACTTGTGCTTGACGAATGTTCCACGGAAAAAAATTTGGTGGAGACCGGATGTAACCGGCCTCCTTTGCAGCCCCTCTCTGGATGTATGCCACGTGCAAACCCCAACGATCGAACGGATCGCTCGACTCAGCTCCACCCCCAGGCCCTAGCACGGCCAGGGCGTAGGCTCGGCTCAGAGTCCGACGCGGCTTTTAGGTTCATCGTCGGCTCCGCGCAGCCGTCTTCTCGTTTTCGTGGCCGACGCCGACGAACCGGCGCCTGTGCCGATCGGGGTGGCGGCCGTCGCGGACGAACCCCGAGACATCGGCGACTACGGCTGATTCCGGCGATGACGCCGGATTCCGGTTCTTCTCCAATTTATGAATCAATCGATCTATCTTGTTTGCTACGCATCATATCGATTGTTCTCGGATCGTGATGAAGTGGCCGTCGGCTATGCACCACCTCCAGCTGCTGGAATCAGAACGTTTCAAGCTCCAGAAACAAATCTTCAAGAATTCCATCTGGATCCAAATTAATTAGGAACACCAACAAATTCTTATTCCTCGCCGCGTGTTGGTCACCTGGCAGCTGCGGAGCTCGGCACGTCCGCTGTGGTTCTGAGGTGCTCCCATGGATTATGGATACGTCAGTCTCAGGGACGCCGTCGGCGCCGGATCGGAGGATTAGAGTCGCCAGGCTATGTCGAAAATTCTCCGCGTCTCGAATCGATCGAGCCGATAGGGAGCCTGAAAGGAGAATCAGCGTGTGCCCTCGAGCCGAGCCTACGCTCTCCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002733