BGIOSGA002735

From RiceWiki
Revision as of 10:40, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002735| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002735, complete gene.| tag = P0443D0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA002735

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002735, complete gene.

LocusTag

P0443D08.44

Ensembl Transcript ID

BGIOSGA002735-TA

Ensembl Protein ID

BGIOSGA002735-PA

Length

1487

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:2440366..2441852

Sequence Coding Region

2440366..2440459,2440564..2441501,2441604..2441852

Genome Context

<gbrowseImage1> name=IndicaChromosome01:2440366..2441852 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:2440366..2441852 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCTCCCTCCCCTGATCTCGCCCGGATCCTCCCCCGCGTGCTCATCGTCTCCCGCCGAACCGTCCGCAAGAACAAGTTCGTCGACTTCGTCGGGGAGTACCACCTCGACCTCATCGTGGGATACGGCGCAGTGCCGGTGATCGTGCCGCGGGTCGCCGGCGTGCACACGCTGCTCGACTCGTTCGAGCCCATCCATGGCGTGCTGCTGTGCGAGGGCGAGGACGTCGACCCGTCGCTGTACGGCGGCGGCGGTGCGGGGTCGGGGGGGCTCTCGGCGGAGCAGCTCGACGCCGTGCGGAGCCTCCACCCGAGCGACGCCGCCATCGACCACGAGAAGGACTCCATCGAGCTCCGCCTCGCGCGCCGCTGCCTCGAGCGCAACATCCCCTTCCTCGGCATCTGCCGCGGCTCGCAGGTGCTCAACGTCGCCTGCGGCGGCACGCTCTACCAGGACGTCGACCACGAGCTCCCCGCCGCCGTTCGCCACATCAACTACGACAACTACGACGGGCACCGCCACCCGGTGCGCGTCCTCCCCGGCACGCCGCTGCACGAGTGGTTCGCGGAGTCGCTCGACGGCGAGGACAGCCGGCTGACGGTGAACAGCTACCACCACCAGGGCGTGCGGCGGCTGGCGGAGCGGTTCGTGCCCATGGCGTTCGCGCCGGACGGCCTCGTCGAGGGGTTCTACGACCCCGACGCGTACAACCCCGGCGAGGGCAAGTTCATCATGGGGCTCCAGTTCCACCCGGAGCGCATGCGGAAGGCCGGCTCCGACGAGTTCGACTACCCGGGCTGCCCCATGGCCTACCAGGCGTTCGTCCGCGCCGTCGTCGCGTACCAGGAGAAGCTGGCCGCCGCCGCCGCCATGCCCGCCTCGCCGAAGCTGAACCAGGAGATGGAGAAGCAGCGCAAGGTGCTCGTCCGGAGCTTCTCGCTCGCCAAGAACCTGTACGTCTCCGGCGCCGAAGCTGGCACGCCGCGGCCGGCCGAGCAGCGCGACCTCGACGCCGGCGCCGAGTTCCTCGAGTCGAACACGGCGGCGCTGAGCGTGCAGCAGGAGAAGCGGCTGAAGCAGATGGGCGCGACGGTGAGGAACGCGTCGGGGTACATCAACCGGCTGAAGCTGAACGAGGAGCGGGAGGCGGCGGCGAGGGCGCTCATGGCGAAGATGTCCATCGACCAGCTCTCCGACCTCGCCTCCTTCTACCACATCATGGGGACCATCTGCTCCGAGGTGCTCGACAGGAAGCTGCACTCCGCTGCTCCCGCTCCATGA</cdnaseq>

Protein Sequence

<aaseq>MSPSPDLARILPRVLIVSRRTVRKNKFVDFVGEYHLDLIVGYGAVPVIVPRVAGVHTLLDSFEPIHGVLLCEGEDVDPSLYGGGGAGSGGLSAEQLDAVRSLHPSDAAIDHEKDSIELRLARRCLERNIPFLGICRGSQVLNVACGGTLYQDVDHELPAAVRHINYDNYDGHRHPVRVLPGTPLHEWFAESLDGEDSRLTVNSYHHQGVRRLAERFVPMAFAPDGLVEGFYDPDAYNPGEGKFIMGLQFHPERMRKAGSDEFDYPGCPMAYQAFVRAVVAYQEKLAAAAAMPASPKLNQEMEKQRKVLVRSFSLAKNLYVSGAEAGTPRPAEQRDLDAGAEFLESNTAALSVQQEKRLKQMGATVRNASGYINRLKLNEEREAAARALMAKMSIDQLSDLASFYHIMGTICSEVLDRKLHSAAPAP</aaseq>

Gene Sequence

<dnaseqindica>1..94#199..1136#1239..1487#ATGTCTCCCTCCCCTGATCTCGCCCGGATCCTCCCCCGCGTGCTCATCGTCTCCCGCCGAACCGTCCGCAAGAACAAGTTCGTCGACTTCGTCGGTGAGCTCTCGTCATCTCCTCCTCCTCCTCCTCCATGGATTTTTCTTTTTTTGTTGGTTAGGACGTTGGCTGAAATGCGCTGCATGGCGCATGCATGTTCGCAGGGGAGTACCACCTCGACCTCATCGTGGGATACGGCGCAGTGCCGGTGATCGTGCCGCGGGTCGCCGGCGTGCACACGCTGCTCGACTCGTTCGAGCCCATCCATGGCGTGCTGCTGTGCGAGGGCGAGGACGTCGACCCGTCGCTGTACGGCGGCGGCGGTGCGGGGTCGGGGGGGCTCTCGGCGGAGCAGCTCGACGCCGTGCGGAGCCTCCACCCGAGCGACGCCGCCATCGACCACGAGAAGGACTCCATCGAGCTCCGCCTCGCGCGCCGCTGCCTCGAGCGCAACATCCCCTTCCTCGGCATCTGCCGCGGCTCGCAGGTGCTCAACGTCGCCTGCGGCGGCACGCTCTACCAGGACGTCGACCACGAGCTCCCCGCCGCCGTTCGCCACATCAACTACGACAACTACGACGGGCACCGCCACCCGGTGCGCGTCCTCCCCGGCACGCCGCTGCACGAGTGGTTCGCGGAGTCGCTCGACGGCGAGGACAGCCGGCTGACGGTGAACAGCTACCACCACCAGGGCGTGCGGCGGCTGGCGGAGCGGTTCGTGCCCATGGCGTTCGCGCCGGACGGCCTCGTCGAGGGGTTCTACGACCCCGACGCGTACAACCCCGGCGAGGGCAAGTTCATCATGGGGCTCCAGTTCCACCCGGAGCGCATGCGGAAGGCCGGCTCCGACGAGTTCGACTACCCGGGCTGCCCCATGGCCTACCAGGCGTTCGTCCGCGCCGTCGTCGCGTACCAGGAGAAGCTGGCCGCCGCCGCCGCCATGCCCGCCTCGCCGAAGCTGAACCAGGAGATGGAGAAGCAGCGCAAGGTGCTCGTCCGGAGCTTCTCGCTCGCCAAGAACCTGTACGTCTCCGGCGCCGAAGCTGGCACGCCGCGGCCGGCCGAGCAGCGCGACCTCGACGCCGGCGCCGAGTTCCTCGAGGTAAAGACCCAGCCCAACCACCGCACCTCCACCGGCGCGCACGGATGCCAGCCGCCGGACTTCAAAGCTAACCGCCGTGGCGTGGTGTGTGTGGTGCAGCAGTCGAACACGGCGGCGCTGAGCGTGCAGCAGGAGAAGCGGCTGAAGCAGATGGGCGCGACGGTGAGGAACGCGTCGGGGTACATCAACCGGCTGAAGCTGAACGAGGAGCGGGAGGCGGCGGCGAGGGCGCTCATGGCGAAGATGTCCATCGACCAGCTCTCCGACCTCGCCTCCTTCTACCACATCATGGGGACCATCTGCTCCGAGGTGCTCGACAGGAAGCTGCACTCCGCTGCTCCCGCTCCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002735