Os11g0447300

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Revision as of 09:09, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0447300| Description = GTP-binding protein, HSR1-related domain containing protein| Version = NM_001074360.1 GI:115485368 GeneID:4350437| L...")
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Gene Name

Os11g0447300

Description

GTP-binding protein, HSR1-related domain containing protein

Version

NM_001074360.1 GI:115485368 GeneID:4350437

Length

6873 bp

Definition

Oryza sativa Japonica Group Os11g0447300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:16707366..16714238

Sequence Coding Region

16707503..16707664,16708195..16708299,16708449..16708526,16709830..16709971,16710051..16710121
,16710867..16710963,16711174..16711385,16713679..16713924

Expression

GEO Profiles:Os11g0447300

Genome Context

<gbrowseImage1> name=NC_008404:16707366..16714238 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:16707366..16714238 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgggggctggcgcgggcggggaagcgcgccagcgagatggcgttcaacgccgggggaggcgccgtcaactggttccccggccacatggccgccgcctcgcgcgccatccgcgaccgcctcaagctcgccgacctcgtcctcgaggtccgcgacgcccggattccgttgtcctcagcgaatgaagaccttcaacctgtgcttgcatctaagaggcgtatccttgctctaaacaagaaagatctagcaaatcctaatataatgaataggtggcttcatcattttgaatcatgtaagcaggattgcatttcgataaatgcacatagcaccagttctgttagtcagcttcttgggctagtggagttcaaactaaaggaagcaatctcaaaagagcccacacttcttgttatggttgttggtgttcccaatgttggcaagtctgccctcataaattccattcatagaattgtcacttctcgttttccagtgcaagataagaacaagcgagctacagtaggaccattgcctggtgttactcaagatattgcaggatataagatttcaagccagccgagcatttatgtacttgatacaccaggtgttctagtaccaagcattccagacatggagactggtttaaagcttgctctgacaggagccgtcaaggactctgtggttggagaggagcgtatagcgaaatatttattgtctcttcttaatattagaaaaacccctctacattgggagcgactagtttaccgaagagaacaattcaatgaagatgcattcaatagtaatgaaaaagactatagagattcaccacgaaggaggaggcgaccaaataactctgacgccttatatgtacaggacatggtgatggaggtccagagaacactttgcagtacatttatggacttcgcggacaacactgaggatgagaacgagcttgaaagcctgatagactcacagcttgtcgctcttcgcaaggtgttcaggatacctcacaaaccgtttgatgaaacgcatggtccggcctccaagaagttgttgactcttttcagatcagggaagcttggccctttcatcctcgacgaccttccagataatcagtaa</cdnaseq>

Protein Sequence

<aaseq>MRGLARAGKRASEMAFNAGGGAVNWFPGHMAAASRAIRDRLKLA DLVLEVRDARIPLSSANEDLQPVLASKRRILALNKKDLANPNIMNRWLHHFESCKQDC ISINAHSTSSVSQLLGLVEFKLKEAISKEPTLLVMVVGVPNVGKSALINSIHRIVTSR FPVQDKNKRATVGPLPGVTQDIAGYKISSQPSIYVLDTPGVLVPSIPDMETGLKLALT GAVKDSVVGEERIAKYLLSLLNIRKTPLHWERLVYRREQFNEDAFNSNEKDYRDSPRR RRRPNNSDALYVQDMVMEVQRTLCSTFMDFADNTEDENELESLIDSQLVALRKVFRIP HKPFDETHGPASKKLLTLFRSGKLGPFILDDLPDNQ</aaseq>

Gene Sequence

<dnaseqindica>138..299#830..934#1084..1161#2465..2606#2686..2756#3502..3598#3809..4020#6314..6559#aagagagaggggtttttcaatttcgaagtccattcacgcgcagcctacgcgcggcgacacgccgtcacaccgtctgaccgcaccgccgactgcaccatccggcgccgccgcggcgcgctcgcgcgggggtgggcacgatgcgggggctggcgcgggcggggaagcgcgccagcgagatggcgttcaacgccgggggaggcgccgtcaactggttccccggccacatggccgccgcctcgcgcgccatccgcgaccgcctcaagctcgccgacctcgtcctcgaggtccgcgacgcccgggtgagtgccgcgctccgctccgctctgtttgcgctcctcggtatacctgcctctttcttcgccttctcgaataaatgccgctcggtgggtgattctagtcgctccgacggtgttcgacgaaatgtctcgcctgtctgtgagtgtgtcatgtaggaatgcggtggaacgtgagtagtggaatcaactccgaaacagcacttgattgtgcagagtttcatactctatgtactataattgtgatcctcgtgcttaagtagcttctacttactttaaaactagttcttttttttttcttttagaaattgtcttttacaagttggtgaataatttggctgtgtgcctacgggcagaggctggagatgtaacccatttccattatctaaaaaaaaacaagttggtgaataatgttccattcaattcaattatcatcttttgattttttattgctgcattttcatgtgcagttcgtttgttcgtctgtattgtattcctctgattactgatgtacacctattgtaagttatgtccagattccgttgtcctcagcgaatgaagaccttcaacctgtgcttgcatctaagaggcgtatccttgctctaaacaagaaagatctagcaaatcctaatataatgaatgtaagtgtacactgatttttagctcagctcctcaaacttagttgtcaattcatgttgaaacattattactttcatgtaccttcccagttatgttgtttggcaaatatgatttattatttactcacaagaattttacatattatttgcagaggtggcttcatcattttgaatcatgtaagcaggattgcatttcgataaatgcacatagcaccagttctgttagtcaggtcagttgactgttaattcctattttatccattttttttctattgtaaacttaacataatatatgtctctaagctttaagaagaggagttgacaatgcttttggtgtactctatactgattctctatagatgaatctatgtaataagatgtggcattcttagggttttctaaaattattgcatcctctatataatgtatatgtttgattcatatgattctatttagtttcagatttcaagttgatcattttgtcattttaaaattagaatatactccctcctattctttgttgtgttcctctatgctcaaattcctagaaatccagtcacttaccaaagtaaccaataaaaacatgcagcggtcaagatgcaagtatgaatgccttgcctccaactgcatccatgcatgaattgataataagtatcttgtagaggagcattactgtatcagagaaacataacaaagctaggtgctttcgaaattacatgcatcatgcatgcaacggccattcctgagtatcaggaaattaattttacagcactgttcaacaaaagaagtagaatggtatatacttacatgaaaaccagtgcaatacacaggaggtagctacctatatcataagtggcaggtggtgatgtgctccaaaaccttagcgtaatgttgagagtaggctattgtttatcctattagcatttagaatactgattggtgtttgctgaaatttgtataactggtatttctaaggtgcagtggaccaatcgttttgttaagtattttaaatagtttccaacaaattagtaaatttacactgcattcaaatttatttgattttttttaagttttcttggggtcatttagtggaagtgtactatctttatttttataaggtaattgcactttgcatataagtaacattgctcctccttggtgcatccatccgaaaattcaaaacaatgcttcttgaaatgaatgaaggaagcaaatcttttttgtttcgtacaaaatgctgatacatatgtctatctgcgccagtaaagtcctcaattattacatttaaccacctaaatttgctctccttacccccagacattttctataggaaaaactaaaaacttgaatgaaatgcagctgtatatcagtatatgttctgcaacaatgctattctattcatgcaaacatccttcatccttgcagcttctgtatggtacagactgtgttctggctaatttaacattccatatgacttaaccagttaagatactttacattcttagtatttttataactcttgtaaattaacagcttcttgggctagtggagttcaaactaaaggaagcaatctcaaaagagcccacacttcttgttatggttgttggtgttcccaatgttggcaagtctgccctcataaattccattcatagaattgtcacttctcgttttccaggtataatatttacagagtaaaatatctatgcatctaatttatgattgactattcatgtttgttgtttctctactcccagtgcaagataagaacaagcgagctacagtaggaccattgcctggtgttactcaagatattgcaggatataaggtgagtctgtaagtccaatattttctcaacatctcttagtttgctagattgatgaatccagtccgtcggtaatattgagctagatatgagaaatattcatgatagcacatgttaatctgacgtttttcagttgtattattctatcccacatgtgttatatctgcgttttgttttgcttgttgctctttaattttcatattaaatactagatgtgacaaaatgaatggatgaggctcatgtccatggatatggatggtaacaagcttagactcttttccctttctttgtctgaaaatatattaagtttccacaattcacgttacaatatagttaggcctttcttgttcagtcctatgttaggataataggtattaactgtggaagagtacaggaaaaatgaggcttaagagataaagattacctttgtttgatccaaaatttacctcctgaatcattttgcctacaaattaaacacatcccacaccacaggccacttagacccacttaagctgccatatccagttcagcatatctcatgtccagccttattacggttccaatccatttcctgttgccatctaccctgactccgttcttttgtgcaccatcagtttgcttagtttgcaattacatggttcaagtaaatgcattcatagtgactaatcattgatcagatggtttctttttttcttgttttctttttgctataatcgagtggattaacagcaatacttgtgtcggatagatttcaagccagccgagcatttatgtacttgatacaccaggtgttctagtaccaagcattccagacatggagactggtttaaagcttgctctgacaggttagattattttagcttctgtattttctcttctgtgcacgaattcatctgaagaataagaatattatcgtgttctctgcttagagaacttatccatatttgataaacacaagattaatcatggtttactcttgttttacctatcactgatatcaagttgtccatacttgtactgccacattgctagagccctttttatattatttacaggagccgtcaaggactctgtggttggagaggagcgtatagcgaaatatttattgtctcttcttaatattagaaaaacccctctacattgggagcgactagtttaccgaagagaacaattcaatgaagatgcattcaatagtaatgaaaaagactatagagattcaccacgaaggaggaggcgaccaaataactctgacgccttatatgtacaggtaccaactcttatcagaaagtttactgcatgagaaaccatcgttatggggatataactgggcaacataatcggaactccccatgtatacatatgatgaaatttggatggaataaatttatccaggcttggcgaccacattgatcaatattttgcagattataccacaaaataaataatcatatatgagtgatctcaccatctggatccgtttcaaaatctgatgcagccaaagatcataaaattgcatccgagtatacagctagcttttataagttgcagaataacatgcaatgtttgatattactaacctgttgtatgtacaattatctcactgttttttcccctttattaaatgaaggcatcaattgactactaaatggattaagcattatgtaacatttgatcaatccttataacactaactgtccatccagtggttttacggtgcattttctcttttcctcttgaggttgaatggctgcccttcagaaagggcgtgttaaatgaaatttaagaatcgcatatcattctaccatgttgtggttagaggtttgctgaaaaattgtgttttcatgcttagatctcaaaacattatgcagttatgattatagaagtccaatggtaacttatcccttgctaataatgttttcttgccatggagtgtcttatttttgctggtgttcatgttgctatacactgggatatgctagtttgttggcttttaagtagcagatcattcagaattctggcttagtatctcgcaaaacatgttggaacaaccaggtagataataatctgttttttcctatattatatatttatattattaccgttcagaaggtggtgaaaaaaaatgttctcgttctttttttcattaagttgtgctccttaaatattatatttttgttgatcaattttcagtatttcattgtcatgtcaaacccatcatctcagaatatgtagagcaatatctatatttacatttttagtgcaaatttgtttattttactatagctgtcatcgagcaacgtcatttagttgggaaatttcatgtgttccgtggagcacaggagcacttgagcttcaaaccaacaaaaatagtgtgcacatatttataaaaatatctacgaaaaagtagcatacagtatgtcgttatccattactctgtaaaatttcaaattgaaatttgaacatggagtaaaattaacataaactctgctgaaaaaggcattggaaataaaaattattactgtcagaagaatgtctttttttatttctccaagtgtacatcaaatctagatttgaacttgtgtggagtgatggatgacaacacattttaaatttattcagaatttgctatgactgttgggatgtgtttttgttggttttaagctcaggtgctattctgctccatgcagcacctgaaactttcaaccaaaaaaaaaaacaatattaccttagcgttgatacaatatgtttctccaatattatcagtggagaaagagtgtattcagttttgcaacatgtttccattggtggagttgtacgcgctttagttcaacccttggcttataggagacattaatggtggttgagatttgagaaaaggcacatcatcagctagcagcctgttcttgttgggctggagtacttatatggacatgttaacctcaatgttgtttgtcacacacacacattgggccactctgcctgtgtggcatgtgtagttggtgtatcttacagaaacattggggtggctggtgggattatggttgtaagcttgtatgatcatgctacttttgggttgtctttggcaccgtggaccatggaaagcatcccctggatagacttgatgccatgtgtggttggtgacaccatgtgattatgtccaatggttagatctgtccattattattttaatgtagttgaacaattaacatggtacgtctgttgacttgccaatcgctcatgtttgatatattttcttttgtgggatcgtgtttttagtatatattctccttatgacattattgactgactgcatttcaagattgccgtgtgcgctaaacttcctagttaactcttaccgttattttctgtcatgtcatgaacttgttgcattacaataggccgttctatgtacatttaatcagaaaaccaaatttgtgcaactatttgtaaggtacagattgtaccttcgcacctaattgtgctgcccatcgtactgtggcaattaatgagttctcttatctattttgtacaagttcataaacctcgcccctcttctccaggacatggtgatggaggtccagagaacactttgcagtacatttatggacttcgcggacaacactgaggatgagaacgagcttgaaagcctgatagactcacagcttgtcgctcttcgcaaggtgttcaggatacctcacaaaccgtttgatgaaacgcatggtccggcctccaagaagttgttgactcttttcagatcagggaagcttggccctttcatcctcgacgaccttccagataatcagtaaaaggctggggtgcatggcggagcttaggactttaatcctgtgaggtcaattactagtaatttgtatttaagtggagtcatttctctaaattttttgaatttatacatgaaaatcaaggtttgtagggtgttttttaaaaagctgtggggtcagccgacccccacagaatatgcctggatccgccacccgtgcatgtatgaattatatgtatgtttatgagcagctaaggatttctcctgatagagatggctcgatatgataatgatagatggtgatgggcgtccctctagggagcagctttttttttctttttt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0447300, RefSeq:Os11g0447300