BGIOSGA002742

From RiceWiki
Revision as of 10:41, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002742| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002742, complete gene.| tag = OsI_003...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA002742

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002742, complete gene.

LocusTag

OsI_00321

Ensembl Transcript ID

BGIOSGA002742-TA

Ensembl Protein ID

BGIOSGA002742-PA

Length

2558

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:2519598..2522155

Sequence Coding Region

2519598..2520336,2520690..2520834,2521716..2521779,2522072..2522155

Genome Context

<gbrowseImage1> name=IndicaChromosome01:2519598..2522155 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:2519598..2522155 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCAGCCTCCCATCCTCCTCCCGCTTCTCCTCCTCCTCCTCCTCCTCGCCGCCGCCTCGCCACGGCCGGTTCTCTCCCGCCGCCACGCCTCGCCGCCGCTCGCCACCGAGACGCTCGACGTCGCCGCGTCGCTGTCCCGGGCGCGGGCCGCGGTATCCGCGGAGGCCGTGCCGCTCCACCAGTCCGCCGCCGCCGCCGTGTCCACGGAGGTCGTCGGGGAGGAGCACGAGGAGGGGCGCCTGGCCCTGCGGCTCCACTCCCGGGACTTCTTGCCGGAGGAGCAGGGGCGGCAGCGGCACGCCAGCTACAGGTCACTCGTGCTGGCTCGCCTCCGCCGCGACTCCGCCCGCGCCGCCGCGGTGTCGGCCCGCGCGGCGATGGCGGCGGACGGGGTGAGTCGGTTCGACCTGGTGCCGGCCAACGTCACGGCGTTCGAGGCGTCGGCGGCGGAGATACAGGGCCCCGTGGTGTCCGGGGTTGGGCTCGGCAGCGGCGAGTACTTCTCCCGCGTCGGCGTCGGCAGCCCCGCGCGGCAGCTGTACATGGTGCTCGACACCGGCAGCGACGTCACCTGGGTGCAATGCCAGCCGTGCGCCGACTGCTACCAGCAGTCCGACCCGGTGTTCGACCCTTCCCTCTCCACCTCCTACGCCTCCGTCGCCTGCGACAACCCGCGCTGCCACGACCTCGACGCCGCCGCCTGCCGCAACTCCACCGGCGCCTGCCTCTACGAGTCGCTGGCTGCAATGAAGGCATTGAAGGATTCCCTGAAAATTCCAGCAAGGATGGGGTGGAATGGGGATCCATGTGCACCAAGGACATGGGATGCATGGGAGGGAGTCACTTGCCTCCGCAAGGACAAAGGGCTTGTGATCATCCAACTGGATCTTGCAAGTCAAGGACTAAAAGGTTACATCACTGATGAAATAAGTCATCTGACAGACTTGGTTGTTGTATTTCTACTTACAGAGCAAACACTCATTGACAATTGCTGGCCTGAAGCAAGGACAGTTGTGACTTGTGACTCGTGA</cdnaseq>

Protein Sequence

<aaseq>MQPPILLPLLLLLLLLAAASPRPVLSRRHASPPLATETLDVAASLSRARAAVSAEAVPLHQSAAAAVSTEVVGEEHEEGRLALRLHSRDFLPEEQGRQRHASYRSLVLARLRRDSARAAAVSARAAMAADGVSRFDLVPANVTAFEASAAEIQGPVVSGVGLGSGEYFSRVGVGSPARQLYMVLDTGSDVTWVQCQPCADCYQQSDPVFDPSLSTSYASVACDNPRCHDLDAAACRNSTGACLYESLAAMKALKDSLKIPARMGWNGDPCAPRTWDAWEGVTCLRKDKGLVIIQLDLASQGLKGYITDEISHLTDLVVVFLLTEQTLIDNCWPEARTVVTCDS</aaseq>

Gene Sequence

<dnaseqindica>1..739#1093..1237#2119..2182#2475..2558#ATGCAGCCTCCCATCCTCCTCCCGCTTCTCCTCCTCCTCCTCCTCCTCGCCGCCGCCTCGCCACGGCCGGTTCTCTCCCGCCGCCACGCCTCGCCGCCGCTCGCCACCGAGACGCTCGACGTCGCCGCGTCGCTGTCCCGGGCGCGGGCCGCGGTATCCGCGGAGGCCGTGCCGCTCCACCAGTCCGCCGCCGCCGCCGTGTCCACGGAGGTCGTCGGGGAGGAGCACGAGGAGGGGCGCCTGGCCCTGCGGCTCCACTCCCGGGACTTCTTGCCGGAGGAGCAGGGGCGGCAGCGGCACGCCAGCTACAGGTCACTCGTGCTGGCTCGCCTCCGCCGCGACTCCGCCCGCGCCGCCGCGGTGTCGGCCCGCGCGGCGATGGCGGCGGACGGGGTGAGTCGGTTCGACCTGGTGCCGGCCAACGTCACGGCGTTCGAGGCGTCGGCGGCGGAGATACAGGGCCCCGTGGTGTCCGGGGTTGGGCTCGGCAGCGGCGAGTACTTCTCCCGCGTCGGCGTCGGCAGCCCCGCGCGGCAGCTGTACATGGTGCTCGACACCGGCAGCGACGTCACCTGGGTGCAATGCCAGCCGTGCGCCGACTGCTACCAGCAGTCCGACCCGGTGTTCGACCCTTCCCTCTCCACCTCCTACGCCTCCGTCGCCTGCGACAACCCGCGCTGCCACGACCTCGACGCCGCCGCCTGCCGCAACTCCACCGGCGCCTGCCTCTACGAGTCGCGTACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAAGAACGTGACGAGGATTGACATTTTCAAGCAAGTGGGAGGGTTCACCGCGTTCAAGTGGACATACATTGTGGAGAATTTGACGAGCTCCACCATGAGTGTGAAGCTTGTGCCAGTAGTAGGACGGCCGATCCTGTGCGGGCTTGAGAATTATGCAATGGTGCCACTTGAGACGAGGACAGTGCCAAATCAAGGTGACATGGTTTGAAGATTGCGCTCTCAGCCGAGAAAATTGGAGACCAGCAAAAATTTCCTCTTGTACATTCTCTAAGCTTGTTTTTTATTCATCTTGGCAGTGGCTGCAATGAAGGCATTGAAGGATTCCCTGAAAATTCCAGCAAGGATGGGGTGGAATGGGGATCCATGTGCACCAAGGACATGGGATGCATGGGAGGGAGTCACTTGCCTCCGCAAGGACAAAGGGCTTGTGATCATCCAACTGTAAGTACCATTTCGTTGCTCCAGTGCAATTGGTATCCACCAACTGTTTTTGTGGGGATGTTTCTACTTAGATGTGCAGTACTGATTTGATAAGTTTGCCATGAAGTAGCTTTGGCAAGTACAGCCACCTTTTTATTTTCTTCAGATAATTGATAGCGTTTTCCTAGAAAACAACGATGATAGTTTTTTATGATGACCAGAAAAGAAATGATACATATGTACCTCAATTTCACAGCTGAATATTACTCTACTAGTTACCACTACCTCCGTCCCAAATACAAGGGATTTTGTCCTTGTATTTTGGGATGTTGGCAGTACTACACAACTAATCTGACCGAAAGCTTAATTGTCATATTCAAATCGCAGTTAAAAGTTTCTTCTTAATTCTGCTTTGGTTGTTTTGAGTTACCATTTTTTAAAATGGTCAAACTTTAGGGCCTGTAGGTTTGTTGTTGCACATTTCTTGATATCCTTTATCGCAGTAATTTATGACTGTCAGTATTATTGTGTGAAATTGGAAGCAGGGGCGGAGCTAGCACAAAATGAAGGGGGGTTCCACTTGCTTACTTTACTCTAGTTTGAACCAAATTTAGCTTGATACGGGTGCCTAAATTTGAACTGACAGAGTATATATATGGTGAAAATGGACAAACTATAGCTAAAATTTTTTTTCAACCGGGTTCCTGGGCACCCCCCTAGCTCTATGTAGCTCCGCCCCTGATTGGAAGGGAGTCAGTGGACTTCCTTTCTCGTAAAAGCTCTATTGAGCAAACACATATTATATATTTGTGAAAATTATCTAAAAAAAATCTTGTGACATTGATATTTTTGCTGCTACAAACTTATAACCTGTATGTATGTGGTTTCTATGTCCTTTACAGGGATCTTGCAAGTCAAGGACTAAAAGGTTACATCACTGATGAAATAAGTCATCTGACAGACTTGGTAAGCTTGTAAGTATCATTAAACCTACTGAAAGTCGATTTTTCAGTTTGTTCATTATCTTCTTTGATATTTAAAGTATCTGGATATCAACAGTTGGTTTTGTTATCGGTATCTTTTGCACTACGGGAATATATAAAACCTTGAATTATCAAGTTAAGTCTCAAATAGCTCTATAGACTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTATACCAACGGGGGCGCTCACTGAATTGATGGGCACCGGAAATGGATATCTTCACAGGTTGTTGTATTTCTACTTACAGAGCAAACACTCATTGACAATTGCTGGCCTGAAGCAAGGACAGTTGTGACTTGTGACTCGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002742