BGIOSGA002829

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Revision as of 10:42, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002829| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002829, complete gene.| tag = OS01G01...")
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Gene Name

BGIOSGA002829

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002829, complete gene.

LocusTag

OS01G0158000

Ensembl Transcript ID

BGIOSGA002829-TA

Ensembl Protein ID

BGIOSGA002829-PA

Length

4527

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:3518216..3522742

Sequence Coding Region

3518216..3518294,3519018..3519240,3519707..3519860,3520006..3520108,3520307..3520491
,3520725..3520804,3521186..3521336,3521768..3521849,3521974..3522032
,3522132..3522437,3522578..3522742

Genome Context

<gbrowseImage1> name=IndicaChromosome01:3518216..3522742 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:3518216..3522742 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGACGACAGCGGCTCCCCGTCGCCGTCCTCGGCCTCGCCGCTCCAGCACCACCGCGAAGCCCTCAAGTCGTCAGTGCGCAACACGGCAGCTAGCCGGAGGCGGGAACAAGCTATTGCGATTGGGAAGGAAAGACGGGAAGCCTTGATCCGTGCAAAGCGTGTGTGTCGAGCTCCAATTTCTGGCAGTGATGAAGCTGAAATGGAAGAGGGTGATATGGTGGTCGATGAGGAGAAAGCATGTCTTGAGGCAAAGACTGCTCATGCTGTTGAAGAATTGAAATCTGCTTTGTCAATCCAGGGGAAAGGCGTTCAGAAGAAGAAGATAGAGGCGCTTCGTGATTTGAGACGCTTGTTGTCACAGCCTGAAGTACCTCTAGTTGATACTGCAATTAAAGCTGGAGCAGTCCCTCTTTTAGTGCAATATCTATCCTTTGGATCATCAGATGAGCAGTTGCTAGAGGCAGCTTGGTGCCTTACAAACATAGCAGCTGGGGAACCAGAAGAAACAAAATCCTTGCTGCCTGCTCTCCCATTGCTTATTGCTCACCTTGGTGAAAAGAGCTCCACACTTGTTGCCGAGCAATGTGCATGGGCCATTGGTAATGTTGCTGGTGAAGGAGCAGAGCTGAGAAGCACATTACTTGCACAAGGTGCTTTGCGGCCTCTTACCCGTTTAATGTTCTCCAGTAAAGGTTCTACAGCAAGAACTGCTGCTTGGGCTATGTCAAATCTCATCAAGGGGCCTGATCCAAAGGCTGCAAATGAGCTTATTACCATTGATGGTGTGCTAAATGCAATTATAGCGAGCTTGGAAAAGGAGGACGAAGAGTTAGCAACTGAGGTGGCATGGGTTGTGGTCTATCTTTCAGCACTTTCAGACAGAGGTATTAGCTTAATAGTAAGAAGTTCTGTGCCTCAGCTGCTGATAGGACGACTGTTCTCATCTGAGAACTTGCAGTTGCTGATCCCAGTGCTTCGTGGTTTGGGAAATCTTATTGCCGCTGATGACTACATGGTTGATTCAGTCCTAACTGTTGGAAACAATATCATTGATCAAGCATTGTCAGGTCTTATAAAATGTTTGAAGAGTGATAACAGGGTTCTCAGAAAGGAGTCATCATGGGCATTGTCAAATATAGCAGCAGGCAGTTTTGAGCACAAGAAACTGATTTTTGCCAGTGAGGCCACGCCTGTGCTGATACGCCTTGTCACCAGCGCGCAATTTGATATTCGCAGGGAAGCAGCATACACCCTAGGAAATCTGTGTGTTGTCCCTACTGGAAATTGCGAACTCCCAAAGATAATCGTGGAACATCTAGTCGCTATCGTAGATGGTGGAGCCCTTCCAGGATTTATACACTTGGTCAGGTCTGCTGATGTAGATACCGCAGGGCTTGGTCTTCAGTTCCTAGAACTGGTGATGAGGGGGTATCCCAATAAGCAAGGCCCAAAGCTTGTGGAAATGGAGGACGGCATTGAGGCCATGGAGAGGTTTCAATTCCACGAGAACGAGCAGATGAGGAACATGGCCAATGGTTTGGTCGACGAATACTTCGGTGAGGATTATGGCCTCGACGAGTGA</cdnaseq>

Protein Sequence

<aaseq>MADDSGSPSPSSASPLQHHREALKSSVRNTAASRRREQAIAIGKERREALIRAKRVCRAPISGSDEAEMEEGDMVVDEEKACLEAKTAHAVEELKSALSIQGKGVQKKKIEALRDLRRLLSQPEVPLVDTAIKAGAVPLLVQYLSFGSSDEQLLEAAWCLTNIAAGEPEETKSLLPALPLLIAHLGEKSSTLVAEQCAWAIGNVAGEGAELRSTLLAQGALRPLTRLMFSSKGSTARTAAWAMSNLIKGPDPKAANELITIDGVLNAIIASLEKEDEELATEVAWVVVYLSALSDRGISLIVRSSVPQLLIGRLFSSENLQLLIPVLRGLGNLIAADDYMVDSVLTVGNNIIDQALSGLIKCLKSDNRVLRKESSWALSNIAAGSFEHKKLIFASEATPVLIRLVTSAQFDIRREAAYTLGNLCVVPTGNCELPKIIVEHLVAIVDGGALPGFIHLVRSADVDTAGLGLQFLELVMRGYPNKQGPKLVEMEDGIEAMERFQFHENEQMRNMANGLVDEYFGEDYGLDE</aaseq>

Gene Sequence

<dnaseqindica>1..79#803..1025#1492..1645#1791..1893#2092..2276#2510..2589#2971..3121#3553..3634#3759..3817#3917..4222#4363..4527#ATGGCCGACGACAGCGGCTCCCCGTCGCCGTCCTCGGCCTCGCCGCTCCAGCACCACCGCGAAGCCCTCAAGTCGTCAGGTCCGCGCTCTCCACCCAGTACCTCTTCCAGTTTCCTCTTCTCGCCCGTCCGCGGCCGCTCTGGAATTTCGTAGAACATTTGGCGCGCGCGGCCGCCTGCTGCTGCTGGAGGCTGGAGCCCGAGCCGCCCCCTTTGAGTGCGCGTGTGAGTTTCTTCGAGTGAAATTGCTCTTGACTTCCTGGAGGAGAGAGCCGCTCAGACTCTTCTCCGGTCAGGTTTGAGTAGTTGCTAGGTTGGACCAACGAGGGGTTAAAAAGCTTAAAATTAAGGTCAACAGTAGGAGTATTTGGTTTAGCCAACAATTTGGCATGCACTGGAGTATTTGGTTTAGCCAACAATTTGGCATCGAATCATATGAGTGACTGTTCTTATGTGGTTGGAAATCTAGCTGGTTAGCATGGCTTAGCCAACATTTTGGCATGCACTGGACTGTGGCTGACTTGCTGAAACTTAGGTGCTGCGATTGACCTGTTTTTAAGTTTAAAAGTGCACTTCTTCTGTGATTTTAAAGAATTTAATCTGATGTCAGGAATAAACATCCCATAGTCGGTTAATTCTGTGTCCCCTAGCCCTACTGAACTAATCTCATGTGAAACTGCAACGGGTGAAAAAGACAAAATACAGAATAAGCATAATGCATTTTGGTTCATCATATTCATAGAAAGCTTTGTGCTAGAGCACTAGTTATTATAACCTTTAGTTGGTTGGGTTTCTGGTTGTAGTGCGCAACACGGCAGCTAGCCGGAGGCGGGAACAAGCTATTGCGATTGGGAAGGAAAGACGGGAAGCCTTGATCCGTGCAAAGCGTGTGTGTCGAGCTCCAATTTCTGGCAGTGATGAAGCTGAAATGGAAGAGGGTGATATGGTGGTCGATGAGGAGAAAGCATGTCTTGAGGCAAAGACTGCTCATGCTGTTGAAGAATTGAAATCTGCTTTGTCAATCCAGTATGGAACCGGCATATTTTTTATGTATTAATATAAACATCTGTCCGTACATTCTTAATTTAAATATTGCTGACTTGCCTCTTTATTTCCTAATAAAAATACCTAGTTATGTAATTAATTAGGAGTATTTGGTTTATAATTTTTCTATCATGTATTCCTTTTACAGATGATAAAAAAATATTCTATAATTCTGTTATGGTGCATGTGCTGAGTAATTTTCATTATGTTTTACACCTCACATTCTACCAACATTTCAAAACCCTATGCTGCTAACATGAACCAAATGCCCCCCTCTGCTGTCAGATATTCTATTTATTCACTTGTCTTTTAAAAGTATGTTGCTGAAGGTTTGGTTTGAACACTTATAAGTTCCAACTTAAAACTATGAAAATGTGCAAGCATGTACCGAAAGTACTCTGGTTCTGAAGTGTAATATATAACCATCAGTACATATCGTTGCTCTTAGGGGGAAAGGCGTTCAGAAGAAGAAGATAGAGGCGCTTCGTGATTTGAGACGCTTGTTGTCACAGCCTGAAGTACCTCTAGTTGATACTGCAATTAAAGCTGGAGCAGTCCCTCTTTTAGTGCAATATCTATCCTTTGGATCATCAGATGAGCAGGTTGATCATGCTGCACTAATTGTTTCGAAGCTATATCTTCATTAAATATTATAAAGCTGAGTTGAATGTGTTCAGCATTATAATTCTATATCTTTTGTTATTTGAAGTTTGTCTCTTATCAGGACCATTCATGATTTTAATGCAGTTGCTAGAGGCAGCTTGGTGCCTTACAAACATAGCAGCTGGGGAACCAGAAGAAACAAAATCCTTGCTGCCTGCTCTCCCATTGCTTATTGCTCACCTTGGTGGTTAGTTTCATCTCTCTTGTTGGTTGAAATTAAATAATTTTCTTCAATGCTCATCTTTATTCCCATTAGGAAGATATTGCTATATGTTCCTGTATGCGTTTCTCAAGAATGATGTTTGTAGATATTTTTCTACTATTTAGTTTGAAATCATAGCTTTGACTATGCTAAAAATTTAATTGAGCTACCTATGTTGGTTAGAAAAGAGCTCCACACTTGTTGCCGAGCAATGTGCATGGGCCATTGGTAATGTTGCTGGTGAAGGAGCAGAGCTGAGAAGCACATTACTTGCACAAGGTGCTTTGCGGCCTCTTACCCGTTTAATGTTCTCCAGTAAAGGTTCTACAGCAAGAACTGCTGCTTGGGCTATGTCAAATCTCATCAAGGTTGTACTGATAAACTCTCTCTTAATTTTCTAAGCTATCGTTCTAGGCAAGCACAAACTACATACACGTGCTCTCTGAACCGTGCTATTTTCTAAGCTATCATTGTTAGTTTTAGCATTCTTTTGTTATAGAAAACCTTAAGCCATGTTCCAAAACATAATTGGCTTGTAATACATGCTTATCTATTTGCAGAGCATCATTTCACTAACCCATTTGTTTCTCTTGTAATCTAGGGGCCTGATCCAAAGGCTGCAAATGAGCTTATTACCATTGATGGTGTGCTAAATGCAATTATAGCGAGCTTGGAAAAGGAGTATGTCTCTTTATTGACATCCTTTTATTTTGCATTGAACTTTGTATTGCTTTATGTTCACTATATGGGAGTATTGCAATTGGAATAATTCTTTCCTGTCAATCTTATTAGTTATAATTCTGTGCTATGTTGTATTTGTTGGGTACTTGGTACTATTTCCTTATCCGGTGTTCTTTCCATCAGTTATAATTATGTGGTATGTTGTATTTGTTGGGGGTACTTGGTACTATCTCCTTATGTAGTTGATATAGTCTTGTTTAATGTTTGAGGTATTCGATAAAAGTTTTCAATGGCATAGATAATGAATTAACCAAACCATTATTGAACTAGCGTGGACCTTTTTAATCATTACTATTATTGAGTAACTTTTGGACTTATCAGGGACGAAGAGTTAGCAACTGAGGTGGCATGGGTTGTGGTCTATCTTTCAGCACTTTCAGACAGAGGTATTAGCTTAATAGTAAGAAGTTCTGTGCCTCAGCTGCTGATAGGACGACTGTTCTCATCTGAGAACTTGCAGTTGCTGATCCCAGTATGGTCCATTTATCTCTACCTCATAGTGTTTCTTCCTTTTGCTTATTCACACTTTTGATACTTTCCTTTAAATTAATTGAATACCTATTAGTTGAGCCCTATTTATTGTAGTTTATTAATGCTCACCAAACTGACTATGTCTCAAAAGAGAAATCTCTTTGTTCAAAACTATAACTTCTGGTGGCTAATGTGACAAGTAATATGCAATCAGTCCATGTCTCATTCGGAGGAATCTGTTTATTAATTTACTGTTTATATTGAATAAAGGTGGTGATAGTGATTTACCATTTTTGTGTAGTTACTCACTCATAAGGATATACAGTATATACTTTTACTCCCATTCATTAGGGTTCTGCAATTACTGCAAATGTGTATACTGAATGTGGATTTCACATTGCAATCACTTTGATACTTCTACTTTAAATTTAGGTGCTTCGTGGTTTGGGAAATCTTATTGCCGCTGATGACTACATGGTTGATTCAGTCCTAACTGTTGGAAACAATATCATTGGTAAACTCCATGACCCTTTTCCTACCATATCTGTTTACAATGTTTATTCATCAGTTAACAGTTCCTTGTCTTTCTGGAAAATATATCTTGCAAATTGCAAGCACTAACTAAATGTTGTTATTAGATCAAGCATTGTCAGGTCTTATAAAATGTTTGAAGAGTGATAACAGGGTTCTCAGAAAGGTCTGCTTTCCATTGCTGGTTCAACTTTACTTGGTTATACTCGGAGAACTCCTGTGATTATTTGATTTACCCTATGAAATTTGCTGACTGCTTATGTAGGAGTCATCATGGGCATTGTCAAATATAGCAGCAGGCAGTTTTGAGCACAAGAAACTGATTTTTGCCAGTGAGGCCACGCCTGTGCTGATACGCCTTGTCACCAGCGCGCAATTTGATATTCGCAGGGAAGCAGCATACACCCTAGGAAATCTGTGTGTTGTCCCTACTGGAAATTGCGAACTCCCAAAGATAATCGTGGAACATCTAGTCGCTATCGTAGATGGTGGAGCCCTTCCAGGATTTATACACTTGGTCAGGTCTGCTGATGTAGATACCGCAGGGCTTGGTCTTCAGTTCCTAGAACTGGTGAGAAAATCTTTACCACATTAGCTATCTCTGTTTCATTCCTCCAACGGTATTCACCTCACAAGCAGAGTTGCTGAACATGTTCTGTTTCTTTCTTGGATACATTTGGATCTCACTGGAAATTGAATACATTTTTGCAGGTGATGAGGGGGTATCCCAATAAGCAAGGCCCAAAGCTTGTGGAAATGGAGGACGGCATTGAGGCCATGGAGAGGTTTCAATTCCACGAGAACGAGCAGATGAGGAACATGGCCAATGGTTTGGTCGACGAATACTTCGGTGAGGATTATGGCCTCGACGAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002829