BGIOSGA002836

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Revision as of 10:42, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002836| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002836, complete gene.| tag = OS01G01...")
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Gene Name

BGIOSGA002836

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002836, complete gene.

LocusTag

OS01G0161300

Ensembl Transcript ID

BGIOSGA002836-TA

Ensembl Protein ID

BGIOSGA002836-PA

Length

3308

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:3650932..3654239

Sequence Coding Region

3650932..3652231,3652339..3654239

Genome Context

<gbrowseImage1> name=IndicaChromosome01:3650932..3654239 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:3650932..3654239 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCATCCACACTCCCACAGCTTCTCCTCATACTGCTGCTAGTCACATTGTACTGCTCCATCCAAACTGTTGCCAACACCACCATCCCAGTTCATTGCCATCCTCACCAAGCTGAAGCGCTTCTCCAGCTGAAGAGCTCCTTCGTTAACTCCAAGCTGTCATCATGGAAACCGAGCACGGACTGTTGCCACTGGGAGGGCATCACCTGCGATACATCCTCTGGGCAGGTAACAGCGTTGGACCTCAGTTACTATAATCTCCAGAGCCCCGGTGGCCTAGACCCAGCGGTCTTCAACCTCACCTTTCTGAGAAACCTCAGCCTTGCTCGTAACGATTTCAACCGGACCGTTCTTCCTAGTTTCGGGTTTCAGCGGCTCACCAAACTCCTCAGGCTTGATTTGTCGGAAGCAGGCTTCTTTGGTCAGATACCCATTGGAATTGCACATCTCAAGAATTTGCGTGCTCTTGATCTTTCCTTCAATTATCTGTATTTTCAAGAACAGAGTTTTCAAACCATTGTAGCAAACCTGAGCAATTTGAGAGAGCTCTATCTTGATCAAGTGGGCATTACTAGTGAACCAACCTGGTCCGTTGCTTTAGCACACTCTCTCCCTCTGCTGCAGAATCTTAGTTTGTCCCAATGTGACCTAGGTGGAACTATTCATCGTTCATTTTCCCAACTCCGCTCTCTAGTGGTGATCAACCTCAACCACAATAGAATTTCTGGAAGGGTTCCTGAGTTCTTTGCAGACTTCTTTTTCTTGAGTGCCCTTGCTCTCTCGAACAATAATTTTGAAGGGCAATTTCCCACAAAGATATTCCAGGTAGAAAATTTGAGGTCTCTTGATGTATCTTTCAATCCTACTCTTTTTGTCCAACTTCCAGATTTCCCACCTGGAAAATATTTGGAATCACTAAATCTTCAGAGGATAAACTTTTCTGGTAACATGCCAGCCTCGTTTATCCACCTCAAATCATTGAAATTTTTGGGCCTTAGCAACGTAGGATCTCCCAAGCAGGTTGCTACTTTCATACCTAGCCTTCCATCTCTAGATACATTATGGCTCTCTGGATCAGGCATAGAGAAGCCACTGTTATCTTGGATTGGAACAATTAAACTGAGAGACTTGATGCTCGAAGGCTATAATTTCTCCAGTCCAATACCCCCTTGGATCAGAAACTGTACAAGTTTGGAATCTTTAGTGCTCTTTAATTGCAGCTTCTATGGGTCAATACCATCATGGATTGGGAACTTGACTAAGCTTATCTATTTGGAACTTTCACTTAACAGCCTCAGCGGTAGAATCCCGAAGCTTCTTTTCGCTCATCAATCGTTGGAAATGCTAGATCTGCGATCAAACCAACTTTCTGGACATCTAGAAGACATTTCAGACCCGTTTTCCTCGTTGTTAGAATTCATCGACTTAAGCTATAACCACCTTACAGGCTACATACCCAAATCGTTCTTTGATCTTAGAAGACTAACAAATCTCGTGCTTCAATCAAATCAATTGAATGGTACACTGGAAATTAACCTTCTTTGGAAGATGGAGAAACTAGAATCATTAATTATCTCTAACAATATGTTGTCGGTGATAGATCGAGAAGATGGCTATCCATTTCATTACTTCCCTACAATCAAATACCTGGGACTAGCATCTTGCAACCTTGCAAAAATTCCAGGCGCATTGAGAGATATAAAAGGTATGTCTTACTTGGACCTTTCAAACAACAGAATAAATGGAGTAATACCAAGCTGGATATGGGATAACTGGAAGAATAGCTTGTCTGTGTTAGTACTCTCTAACAACATGTTCACTAGCTTGGAAAATAATCCATCTGTTCTTCCCTTGCACACTTTAGATAGACTCAATCTTAGTTCCAACAGACTGCATGGTAACGTACCTATACCACTGACAACTTATACATATGGCCTTTCCTTGGATTACTCTAGCAACAGCTTCTCTTCAATTACTCGTGACTTCGGCAGGTATCTTCGAAACGTCTACTATCTTAGCTTTTCCAGGAATAAAATAAGTGGTCATGTACCAAGTTCTATATGTACCCAACGTTATCTTGAGGTCCTTGACTTATCACACAACAACTTCAGTGGTATGGTGCCATCCTGTTTAATACAAAACGGTGTTGTCACCATATTGAAGTTAAGGGAGAACAACTTCCATGGCGTGCTGCCTAAGAATATTAGAGAAGGATGTATGTTTCAGACAATCGATCTGAACAGCAACCGAATTATAGGGAAACTGCCTAGATCATTGTCTAAATGCAAGAGCTTAGAGGTTCTTGACATGGGTAACAACCAGATTCTTGATTCTTTCCCATCTTGGTTAGGGAACATGTCCAATCTTCGGGTTCTCATCTTGAGATCCAATCAATTCTATGGTTCAGTAGGACTACCTACAGAAAGTGATGCAACCAGTAAGTATTTCTCAGGTTTGCAAATTATTGATTTAGCCTCAAATAACTTATCAGGGAGTTTGCAATCAAAATGGTTTGAGAACCTTGAAACAATGATGGTAAATAGTGATCAGGGTGATGTTTTGGGCATTCAGGGGATATATAAGGGCTTATACCAAAACAATATGATTGTTACATTTAAAGGGTTTAATCTCATGTTTACCAAAATCCTGACTACTTTCAAGATGATAGACTTATCAAACAATGATTTCAATGGTGCTATCCCAGAATCAATTGGGAAGCTAATTGCTCTACATGGTTTGAACATGTCACGCAACTCCTTCACCGGAAGAATTCCATCTAAGATTGGTAAATTGGTTCAGCTTGAGTCCTTGGACCTCTCTTTGAATCAGCTCTCAGAAGCAATCCCACAGGAGTTGGCATCCCTAACATCTCTCGCAATATTGAATCTCTCATACAACAATTTGACTGGACAGATACCACAAGGGCCACAGTTCTTGTCATTCGGCAACAGATCATTCGAAGGCAATGCAGGACTCTGTGGAAGGCCGCTGTCCAAACAGTGCAACTATTCAGGCATAGAAGCTGCAAGATCACCATCATCCTCTCGAGATAGTATGGGGATAATAATATTGTTTGTGTTTGTGGGATCCGGGTTTGGAATCGGCTTTACAGTGGCCGTTGTTTTGTCAGTGGTTTCCCGAGCGAAACACTGGAACTGGAACATTTTTCGTTTCAGTGGTAATACTGTAGTATTTAAGTAG</cdnaseq>

Protein Sequence

<aaseq>MASTLPQLLLILLLVTLYCSIQTVANTTIPVHCHPHQAEALLQLKSSFVNSKLSSWKPSTDCCHWEGITCDTSSGQVTALDLSYYNLQSPGGLDPAVFNLTFLRNLSLARNDFNRTVLPSFGFQRLTKLLRLDLSEAGFFGQIPIGIAHLKNLRALDLSFNYLYFQEQSFQTIVANLSNLRELYLDQVGITSEPTWSVALAHSLPLLQNLSLSQCDLGGTIHRSFSQLRSLVVINLNHNRISGRVPEFFADFFFLSALALSNNNFEGQFPTKIFQVENLRSLDVSFNPTLFVQLPDFPPGKYLESLNLQRINFSGNMPASFIHLKSLKFLGLSNVGSPKQVATFIPSLPSLDTLWLSGSGIEKPLLSWIGTIKLRDLMLEGYNFSSPIPPWIRNCTSLESLVLFNCSFYGSIPSWIGNLTKLIYLELSLNSLSGRIPKLLFAHQSLEMLDLRSNQLSGHLEDISDPFSSLLEFIDLSYNHLTGYIPKSFFDLRRLTNLVLQSNQLNGTLEINLLWKMEKLESLIISNNMLSVIDREDGYPFHYFPTIKYLGLASCNLAKIPGALRDIKGMSYLDLSNNRINGVIPSWIWDNWKNSLSVLVLSNNMFTSLENNPSVLPLHTLDRLNLSSNRLHGNVPIPLTTYTYGLSLDYSSNSFSSITRDFGRYLRNVYYLSFSRNKISGHVPSSICTQRYLEVLDLSHNNFSGMVPSCLIQNGVVTILKLRENNFHGVLPKNIREGCMFQTIDLNSNRIIGKLPRSLSKCKSLEVLDMGNNQILDSFPSWLGNMSNLRVLILRSNQFYGSVGLPTESDATSKYFSGLQIIDLASNNLSGSLQSKWFENLETMMVNSDQGDVLGIQGIYKGLYQNNMIVTFKGFNLMFTKILTTFKMIDLSNNDFNGAIPESIGKLIALHGLNMSRNSFTGRIPSKIGKLVQLESLDLSLNQLSEAIPQELASLTSLAILNLSYNNLTGQIPQGPQFLSFGNRSFEGNAGLCGRPLSKQCNYSGIEAARSPSSSRDSMGIIILFVFVGSGFGIGFTVAVVLSVVSRAKHWNWNIFRFSGNTVVFK</aaseq>

Gene Sequence

<dnaseqindica>1..1300#1408..3308#ATGGCATCCACACTCCCACAGCTTCTCCTCATACTGCTGCTAGTCACATTGTACTGCTCCATCCAAACTGTTGCCAACACCACCATCCCAGTTCATTGCCATCCTCACCAAGCTGAAGCGCTTCTCCAGCTGAAGAGCTCCTTCGTTAACTCCAAGCTGTCATCATGGAAACCGAGCACGGACTGTTGCCACTGGGAGGGCATCACCTGCGATACATCCTCTGGGCAGGTAACAGCGTTGGACCTCAGTTACTATAATCTCCAGAGCCCCGGTGGCCTAGACCCAGCGGTCTTCAACCTCACCTTTCTGAGAAACCTCAGCCTTGCTCGTAACGATTTCAACCGGACCGTTCTTCCTAGTTTCGGGTTTCAGCGGCTCACCAAACTCCTCAGGCTTGATTTGTCGGAAGCAGGCTTCTTTGGTCAGATACCCATTGGAATTGCACATCTCAAGAATTTGCGTGCTCTTGATCTTTCCTTCAATTATCTGTATTTTCAAGAACAGAGTTTTCAAACCATTGTAGCAAACCTGAGCAATTTGAGAGAGCTCTATCTTGATCAAGTGGGCATTACTAGTGAACCAACCTGGTCCGTTGCTTTAGCACACTCTCTCCCTCTGCTGCAGAATCTTAGTTTGTCCCAATGTGACCTAGGTGGAACTATTCATCGTTCATTTTCCCAACTCCGCTCTCTAGTGGTGATCAACCTCAACCACAATAGAATTTCTGGAAGGGTTCCTGAGTTCTTTGCAGACTTCTTTTTCTTGAGTGCCCTTGCTCTCTCGAACAATAATTTTGAAGGGCAATTTCCCACAAAGATATTCCAGGTAGAAAATTTGAGGTCTCTTGATGTATCTTTCAATCCTACTCTTTTTGTCCAACTTCCAGATTTCCCACCTGGAAAATATTTGGAATCACTAAATCTTCAGAGGATAAACTTTTCTGGTAACATGCCAGCCTCGTTTATCCACCTCAAATCATTGAAATTTTTGGGCCTTAGCAACGTAGGATCTCCCAAGCAGGTTGCTACTTTCATACCTAGCCTTCCATCTCTAGATACATTATGGCTCTCTGGATCAGGCATAGAGAAGCCACTGTTATCTTGGATTGGAACAATTAAACTGAGAGACTTGATGCTCGAAGGCTATAATTTCTCCAGTCCAATACCCCCTTGGATCAGAAACTGTACAAGTTTGGAATCTTTAGTGCTCTTTAATTGCAGCTTCTATGGGTCAATACCATCATGGATTGGGAACTTGACTAAGCTTATCTATTTGGAACTTTCACTTAACAGCCTCAGCGGTAAGAACACACATTTGAGTACATATATCAGGACTTCTGACATTCTGTGCTTTTCTTTTTTGAACAAACTTTGACTGTTGTTCTCTCTCTGTCCCTCATCCACACAGGTAGAATCCCGAAGCTTCTTTTCGCTCATCAATCGTTGGAAATGCTAGATCTGCGATCAAACCAACTTTCTGGACATCTAGAAGACATTTCAGACCCGTTTTCCTCGTTGTTAGAATTCATCGACTTAAGCTATAACCACCTTACAGGCTACATACCCAAATCGTTCTTTGATCTTAGAAGACTAACAAATCTCGTGCTTCAATCAAATCAATTGAATGGTACACTGGAAATTAACCTTCTTTGGAAGATGGAGAAACTAGAATCATTAATTATCTCTAACAATATGTTGTCGGTGATAGATCGAGAAGATGGCTATCCATTTCATTACTTCCCTACAATCAAATACCTGGGACTAGCATCTTGCAACCTTGCAAAAATTCCAGGCGCATTGAGAGATATAAAAGGTATGTCTTACTTGGACCTTTCAAACAACAGAATAAATGGAGTAATACCAAGCTGGATATGGGATAACTGGAAGAATAGCTTGTCTGTGTTAGTACTCTCTAACAACATGTTCACTAGCTTGGAAAATAATCCATCTGTTCTTCCCTTGCACACTTTAGATAGACTCAATCTTAGTTCCAACAGACTGCATGGTAACGTACCTATACCACTGACAACTTATACATATGGCCTTTCCTTGGATTACTCTAGCAACAGCTTCTCTTCAATTACTCGTGACTTCGGCAGGTATCTTCGAAACGTCTACTATCTTAGCTTTTCCAGGAATAAAATAAGTGGTCATGTACCAAGTTCTATATGTACCCAACGTTATCTTGAGGTCCTTGACTTATCACACAACAACTTCAGTGGTATGGTGCCATCCTGTTTAATACAAAACGGTGTTGTCACCATATTGAAGTTAAGGGAGAACAACTTCCATGGCGTGCTGCCTAAGAATATTAGAGAAGGATGTATGTTTCAGACAATCGATCTGAACAGCAACCGAATTATAGGGAAACTGCCTAGATCATTGTCTAAATGCAAGAGCTTAGAGGTTCTTGACATGGGTAACAACCAGATTCTTGATTCTTTCCCATCTTGGTTAGGGAACATGTCCAATCTTCGGGTTCTCATCTTGAGATCCAATCAATTCTATGGTTCAGTAGGACTACCTACAGAAAGTGATGCAACCAGTAAGTATTTCTCAGGTTTGCAAATTATTGATTTAGCCTCAAATAACTTATCAGGGAGTTTGCAATCAAAATGGTTTGAGAACCTTGAAACAATGATGGTAAATAGTGATCAGGGTGATGTTTTGGGCATTCAGGGGATATATAAGGGCTTATACCAAAACAATATGATTGTTACATTTAAAGGGTTTAATCTCATGTTTACCAAAATCCTGACTACTTTCAAGATGATAGACTTATCAAACAATGATTTCAATGGTGCTATCCCAGAATCAATTGGGAAGCTAATTGCTCTACATGGTTTGAACATGTCACGCAACTCCTTCACCGGAAGAATTCCATCTAAGATTGGTAAATTGGTTCAGCTTGAGTCCTTGGACCTCTCTTTGAATCAGCTCTCAGAAGCAATCCCACAGGAGTTGGCATCCCTAACATCTCTCGCAATATTGAATCTCTCATACAACAATTTGACTGGACAGATACCACAAGGGCCACAGTTCTTGTCATTCGGCAACAGATCATTCGAAGGCAATGCAGGACTCTGTGGAAGGCCGCTGTCCAAACAGTGCAACTATTCAGGCATAGAAGCTGCAAGATCACCATCATCCTCTCGAGATAGTATGGGGATAATAATATTGTTTGTGTTTGTGGGATCCGGGTTTGGAATCGGCTTTACAGTGGCCGTTGTTTTGTCAGTGGTTTCCCGAGCGAAACACTGGAACTGGAACATTTTTCGTTTCAGTGGTAATACTGTAGTATTTAAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002836