BGIOSGA002855

From RiceWiki
Revision as of 10:42, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002855| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002855, complete gene.| tag = OJ1276_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA002855

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002855, complete gene.

LocusTag

OJ1276_B06.18

Ensembl Transcript ID

BGIOSGA002855-TA

Ensembl Protein ID

BGIOSGA002855-PA

Length

3032

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:3937425..3940456

Sequence Coding Region

3937425..3937914,3938112..3938188,3938885..3939053,3939419..3939507,3939635..3939799
,3939875..3939952,3940121..3940224,3940351..3940456

Genome Context

<gbrowseImage1> name=IndicaChromosome01:3937425..3940456 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:3937425..3940456 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGCGCAGGTTCAGCAGCAGCAGCAGGCGGCGCCGCAGCAGCAGCCGCCGCCCGCGGCCGCGGCGGCGGCGGGGAGGAGGTACGGCGTGCACTTCTCGGCGTCGAGCTTCATCCAGGCGCCGCTCTCCGCGCTGCTCGAGTACTCCGGGATCCTCCGCGCGGACCCCGGCGGCGGGCCGCATCAGGTTGGGGGTGGGGGTGGGGGTGGTGAGGTGTCGATCCGGATTGTCGGGTCCGGGGAGGCCGCCGGGGCGGCGTCCGAGAGGGGGGAGGAAGGGGTCGTGGAGGACGAGGCGGGGGCCGCCCCGCAGGCGAACCCATCCACATCGGCTGCGGCGGCGGCGACGGCCGGCGGCGGGGAGGCGGGGAGGGAGTCCTCGTCGTCGTACCAGAGGTACGACATACAGCAGGTGGCGAGGTGGGTGGAGCAGATACTCCCCTTCTCCCTTCTGCTGCTCGTCGTCTTCATCAGGCAGCACTTGCAAGGTTTCTTCGTGACGATTTGGATTGCCGCCGTGATGTTCAAGTCTAATGATATCCTGCGCAAGCAAACTGCTTTGAAGGGGGAGAGAAAAATGTCAGTCCTTGTTGGGATCACAGTATTATTCGTTGTTCATGTATTTGGAGTTTACTGGTGTTACAAGAATGGTGACCTCGTACGACCTCTGGTGGCTCTTGCTCCAAAAGAAATTCCACCGTTTTGGCATGCAATATTCATCATTTTGGTGAATGATACAATGGTGCGCCAAACTGCTATGATCATCAAGTGCATGTTACTTATGTACTACAAGAACAGCAAAGGGCGTAGCTATCGTAGGCAGGGCCAAATGTTAACAGTTGTGGAATATTTTCTACTTCTGTACCGAGCATTATTGCCTGCTCCTGTATGGTACCGATTTTTCCTGAACAAGGAGTATGGAAGCCTATTTTCGTCTCTAACCACTGGATTATACCTTACTTTCAAGTTGACATCAGTTGTGGAAAAGGTTCAATCATTTTTGACAGCATTGAGAGCGTTATCTCATAAAGACTTCCATTACGGTTCATACGCAACTAGTGAACAGGTTGGTGCTACTGGAGATATGTGTGCTATATGCCAGGAAAAGATGCATACTCCCATTCTTTTGCGCTGTAAGCATATCTTTTGTGAGGATTGTGTCTCTGAATGGTTCGAGAGGGAGCGGACATGCCCGCTATGCAGAGCGTTGGTGAAACCAGCAGACCTCCGGTCGTTCGGTGATGGCTCAACGAGCCTCTTTTTCCAGCTATTCTAG</cdnaseq>

Protein Sequence

<aaseq>MDAQVQQQQQAAPQQQPPPAAAAAAGRRYGVHFSASSFIQAPLSALLEYSGILRADPGGGPHQVGGGGGGGEVSIRIVGSGEAAGAASERGEEGVVEDEAGAAPQANPSTSAAAAATAGGGEAGRESSSSYQRYDIQQVARWVEQILPFSLLLLVVFIRQHLQGFFVTIWIAAVMFKSNDILRKQTALKGERKMSVLVGITVLFVVHVFGVYWCYKNGDLVRPLVALAPKEIPPFWHAIFIILVNDTMVRQTAMIIKCMLLMYYKNSKGRSYRRQGQMLTVVEYFLLLYRALLPAPVWYRFFLNKEYGSLFSSLTTGLYLTFKLTSVVEKVQSFLTALRALSHKDFHYGSYATSEQVGATGDMCAICQEKMHTPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQLF</aaseq>

Gene Sequence

<dnaseqindica>1..490#688..764#1461..1629#1995..2083#2211..2375#2451..2528#2697..2800#2927..3032#ATGGACGCGCAGGTTCAGCAGCAGCAGCAGGCGGCGCCGCAGCAGCAGCCGCCGCCCGCGGCCGCGGCGGCGGCGGGGAGGAGGTACGGCGTGCACTTCTCGGCGTCGAGCTTCATCCAGGCGCCGCTCTCCGCGCTGCTCGAGTACTCCGGGATCCTCCGCGCGGACCCCGGCGGCGGGCCGCATCAGGTTGGGGGTGGGGGTGGGGGTGGTGAGGTGTCGATCCGGATTGTCGGGTCCGGGGAGGCCGCCGGGGCGGCGTCCGAGAGGGGGGAGGAAGGGGTCGTGGAGGACGAGGCGGGGGCCGCCCCGCAGGCGAACCCATCCACATCGGCTGCGGCGGCGGCGACGGCCGGCGGCGGGGAGGCGGGGAGGGAGTCCTCGTCGTCGTACCAGAGGTACGACATACAGCAGGTGGCGAGGTGGGTGGAGCAGATACTCCCCTTCTCCCTTCTGCTGCTCGTCGTCTTCATCAGGCAGCACTTGCAAGGTCATTTCCCCCCCCCCCTTCTTTAATTTACCTCATCCACAAGCACAAATTGATATGCCATCATGTGTTTTGCTGCATGTATGATTTGCATTCGTCTATCTGTGAAATATACGTCACCATGTGTTTGCTGAATGTAGGGTTGCATTAATCTATTTGTGAAATGTTGGGCTAATTTTGCTTTGGATTGTGTCGTGCAGGTTTCTTCGTGACGATTTGGATTGCCGCCGTGATGTTCAAGTCTAATGATATCCTGCGCAAGCAAACTGCTTTGAAGGTAAACTTACCATCATGTTTGTTGAACATTTGGATCAATTTACCTGTAGATTTCTGCTGGAATATTAAGTGACAAATAGATTAATTGTGACACTTGGATGTCTAAAGCACTCCCTTAGATTTAGTTCGTTTTAATGAAAATATCCGGGGTGCAGATCATCTCTAAATAATGTGATGCAGTGATGGTAATATGACGTTTTTTGGCCGCTCATAGTTTTATTGGCATTTTCATGCTAATATGGCTTACAGCTTTTTGGCCACTAAGTTTTATTTGGCATTTTCATGGATTTTCTATATCCGAACACGTTCTCATTTCACGTTTGTGTATTACCAATCATCAATCTGTCACTAATGTCATGCTGTGCTTGTACTTATATTTGTGCTGCTGTCCAAGGATATGACGTTGACTTGTTTACTGGTTTGTAACCTCTGTTATACTGTCAAGAAATCACAATGGTTATTTACATATACAAATCAGATATTCCTTGTTTTTGAGTGTTTACTGCACCATCTAATCGATTTTTGAGATTTGTTGACAATGCTATTTATATAGAGAATTGCAAGTATCTTTATATTCCTGGCTTTCCCATCATGATCAGAAGTTACATTATTATGTGGATTTAATTGCTTTCAATTTGTTTATATAAACAATGTGGTACTTACATATGATACATTGATATTTGCCTTTTTGGTTCAGGGGGAGAGAAAAATGTCAGTCCTTGTTGGGATCACAGTATTATTCGTTGTTCATGTATTTGGAGTTTACTGGTGTTACAAGAATGGTGACCTCGTACGACCTCTGGTGGCTCTTGCTCCAAAAGAAATTCCACCGTTTTGGCATGCAATATTCATCATTTTGGTGAATGGTATGTTTTCTCCTCATATGATGCTTGAACACATTTATGTTTTAGATCGTATGTTTTCTCCTCATATGATGCTTGAACACATTTATGTTTTAGAGCTAGAAAGGTTTGTAAACCCTGAAGGCCTTTAAGTTTTTGGCACGTGAGCCCTTTCATTTTGTGAACTGGGCTCAAATGTCCACTCTCATACAAATAAATCATATTTTTTTTATGTTGTAAGTGGCTATCACGTCCTTATACCTGAAGCATGGTTATTTGTATTTACAGGATGCCTTAAGTCAAATCAGTCATGTTGTATTTAGAATTTAGAAATGATACTTAACTTCATAAGGTTTTTGATCATGTGGGTTCCTTCCAATTTTATGCAGATACAATGGTGCGCCAAACTGCTATGATCATCAAGTGCATGTTACTTATGTACTACAAGAACAGCAAAGGGCGTAGCTATCGTAGGCAGGTATGCTGTTTATGCATTTGAATACTATATTTTCTGTGATCTATCATTGTGTGCCGTTTCCTGATAGCTTCAGGTGCAGTGTTATTTGTTTCTGACAACCAGTAATCAATCATTCCTTTTTGCTCAGGGCCAAATGTTAACAGTTGTGGAATATTTTCTACTTCTGTACCGAGCATTATTGCCTGCTCCTGTATGGTACCGATTTTTCCTGAACAAGGAGTATGGAAGCCTATTTTCGTCTCTAACCACTGGATTATACCTTACTTTCAAGTTGACATCAGTTGTGGAAAAGGTACTGTAACTTCCCTTATTTAGTTTCGTAAGGGATACTTAGTGCCTCCTAAAACTCCAGCTGTTTCCTTGTCAGGTTCAATCATTTTTGACAGCATTGAGAGCGTTATCTCATAAAGACTTCCATTACGGTTCATACGCAACTAGTGAACAGGTAATCTATTATATGCTTGAAGCACTAAGTAGTTGTTGGCTATCACTGTCACTGAATGTCTAGAGTAATGATGACCTGTGAAATAAGATTGCATGGACATTGCATAGTGGACTTTTGGCACACTCTATTTTCTATTTTTCTTGACTTGACTCTTGTGTGTCTGTTCAGGTTGGTGCTACTGGAGATATGTGTGCTATATGCCAGGAAAAGATGCATACTCCCATTCTTTTGCGCTGTAAGCATATCTTTTGTGAGGATTGTGTCTCTGAATGGTAAGTACATGTATCTTGCACCCTCTTCTTCTAGCCACTGAAAATTTCTTAATTTCCTCGTGCATCTTTTACCGATCTCATGCTTAATGCTTTCAACCTCATACCAACCTTGAACAACAATGGCAGGTTCGAGAGGGAGCGGACATGCCCGCTATGCAGAGCGTTGGTGAAACCAGCAGACCTCCGGTCGTTCGGTGATGGCTCAACGAGCCTCTTTTTCCAGCTATTCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002855