BGIOSGA002856

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Revision as of 10:42, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002856| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002856, complete gene.| tag = OJ1276_...")
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Gene Name

BGIOSGA002856

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002856, complete gene.

LocusTag

OJ1276_B06.19

Ensembl Transcript ID

BGIOSGA002856-TA

Ensembl Protein ID

BGIOSGA002856-PA

Length

3312

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:3942709..3946020

Sequence Coding Region

3942709..3943470,3943630..3943888,3945417..3945540,3945912..3946020

Genome Context

<gbrowseImage1> name=IndicaChromosome01:3942709..3946020 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:3942709..3946020 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGCTCACAAGTCTCCACATCACGGGGTTTGCCCTCCCCAAGCAAGCTTGGGACATTTGAGTCCCCTCACACATGGCAAATGTCAGGTCCTACAGGCCAGGCTGAAGCTGGTAGCAGCGATGACCAGGATATCAGGCTGTTGTCTGTTTCTTGGAATCAGGACTTTGGTTGCTTCGCTGCTGGAACCAGCAATGGCTTCAGGATCTTTAATTGTGACCCTTTTAAGGAGACTTTCAGGAGGGATCTGAAGAGTGGTGGATTTGGGATTGTTGAAATGCTGTTCCGTTGCAACATCCTTGCTCTTGTAGGTGGTGGCTCCAACGCACATTATCCACCGAACAAGGTAATGATCTGGGATGATCACCGGAGCCATTGTATTGGAGAGTTTGCCTTCCGCTCTGATGTCCGGGCTGTAAAATTGGGGAAGGACTACATTGTCATTGTTCTTGAGCGCAAGATATACGTTTATAACTTCACAGATTTGAAGTTGCTCCATCAGATTGAGACCCAGTCCAATCCAAAAGGATTGTGCTGCCTCTCTCATCATTCCAACACTTCAGTGTTGGCCTGCCCTGGGGTGCATCAAGGGCATGTCCGGGTTGAGCATTTTGGGTTGAAGGTGACAAGGATGATTTCAGCTCATGATTCTCACATTTCTTGCATGGCATTGACAATGGATGGCCTCCTGCTGGCAACAGCAAGCATGAAGGGTACTTTGATAAGAATATTCAACACAATGGATGGTACTCGCCTGCAAGAGGTGCGCAGAGGGCTTGACAAAGCAGACATATACAGCATTGCGCTATCACCCAATGTGCAGTGGTTGGCAGTGTCCAGTGACAAAGGAACTGTTCATATTTTCAGTTTAAGAGTGAGAGTTGCAGGGGAAGATGCTAGTAATGAACAACGCAGTCTTGAAGGTCCACGGATGGATCACCAGAACTCTTCTAGTTCTATAGATCCTCTTATTCAAACGAACACTGGATCCAATGCTAGCTCATCATTGTCATTCATGAAAGGGATTCTGCCGAAGTATTTCAGTTCAGAGTGGTCATTTGCTCAGTTCCATTTACCAGAAGTCACACGTTACATAGTAGCGTTTGGTGCTCAAAACACTGTCATGATGGTTGGCCTGGATGGCAGCTTCTACAGGTGCAGCTTTGACCAGGTTAATGGCGGGCAGATGCTGCAGAAGGAATATTTCCGGTTTATCAAGGCTGACCTCACCCCCCTGAGGACCTCGGCCCCCTGA</cdnaseq>

Protein Sequence

<aaseq>MSSQVSTSRGLPSPSKLGTFESPHTWQMSGPTGQAEAGSSDDQDIRLLSVSWNQDFGCFAAGTSNGFRIFNCDPFKETFRRDLKSGGFGIVEMLFRCNILALVGGGSNAHYPPNKVMIWDDHRSHCIGEFAFRSDVRAVKLGKDYIVIVLERKIYVYNFTDLKLLHQIETQSNPKGLCCLSHHSNTSVLACPGVHQGHVRVEHFGLKVTRMISAHDSHISCMALTMDGLLLATASMKGTLIRIFNTMDGTRLQEVRRGLDKADIYSIALSPNVQWLAVSSDKGTVHIFSLRVRVAGEDASNEQRSLEGPRMDHQNSSSSIDPLIQTNTGSNASSSLSFMKGILPKYFSSEWSFAQFHLPEVTRYIVAFGAQNTVMMVGLDGSFYRCSFDQVNGGQMLQKEYFRFIKADLTPLRTSAP</aaseq>

Gene Sequence

<dnaseqindica>1..762#922..1180#2709..2832#3204..3312#ATGAGCTCACAAGTCTCCACATCACGGGGTTTGCCCTCCCCAAGCAAGCTTGGGACATTTGAGTCCCCTCACACATGGCAAATGTCAGGTCCTACAGGCCAGGCTGAAGCTGGTAGCAGCGATGACCAGGATATCAGGCTGTTGTCTGTTTCTTGGAATCAGGACTTTGGTTGCTTCGCTGCTGGAACCAGCAATGGCTTCAGGATCTTTAATTGTGACCCTTTTAAGGAGACTTTCAGGAGGGATCTGAAGAGTGGTGGATTTGGGATTGTTGAAATGCTGTTCCGTTGCAACATCCTTGCTCTTGTAGGTGGTGGCTCCAACGCACATTATCCACCGAACAAGGTAATGATCTGGGATGATCACCGGAGCCATTGTATTGGAGAGTTTGCCTTCCGCTCTGATGTCCGGGCTGTAAAATTGGGGAAGGACTACATTGTCATTGTTCTTGAGCGCAAGATATACGTTTATAACTTCACAGATTTGAAGTTGCTCCATCAGATTGAGACCCAGTCCAATCCAAAAGGATTGTGCTGCCTCTCTCATCATTCCAACACTTCAGTGTTGGCCTGCCCTGGGGTGCATCAAGGGCATGTCCGGGTTGAGCATTTTGGGTTGAAGGTGACAAGGATGATTTCAGCTCATGATTCTCACATTTCTTGCATGGCATTGACAATGGATGGCCTCCTGCTGGCAACAGCAAGCATGAAGGGTACTTTGATAAGAATATTCAACACAATGGATGGTACTCGCCTGCAAGAGGTGAACAACATGTTCTTTCTTTTTTTCTTTCGTAGACAAACAGAAGGGTGTCTTCTCTATTCCATTGCTTCCTGAGTTGTTGCCTTAGAAGTGTTTCTGGTGTATGTAATCGTGGACAATTGGCATGAATCTTTAATGATCAATCTGAATAACTTGTAGGTGCGCAGAGGGCTTGACAAAGCAGACATATACAGCATTGCGCTATCACCCAATGTGCAGTGGTTGGCAGTGTCCAGTGACAAAGGAACTGTTCATATTTTCAGTTTAAGAGTGAGAGTTGCAGGGGAAGATGCTAGTAATGAACAACGCAGTCTTGAAGGTCCACGGATGGATCACCAGAACTCTTCTAGTTCTATAGATCCTCTTATTCAAACGAACACTGGATCCAATGCTAGCTCATCATTGTCATTCATGAAAGGTTAGTATATCTCTCTGTTTTCACCGTTCATAGTAACTGCTCAGGACATGGAACTTCTGGAATAGATTGAATCGTAATTTTTCAACTCCTGTATGGATTAGCCTTGTCAGTTCAAGAAGCTGTTCTGCATATCACGTTGACTGTTTTTCCATATCTTTTTTTTTAAAGTTTTGCGCTTCTGATGATTGATGAAATGATGTGATGAATCTTCAAGTTAGCTTTTGCTGGAAAGGCATCTGAAAATGTAAACTTTTTTAACTTAATAACTTAATTGACGATTTCTTAAAAAAAATAAAAATGGTGTGAAATGTTTAAGGAATGCATGGCCAGATAAAATCAGGCAAGTTATTACCGCGAAGCAGTGTGGTAAAAGTCAGCTGATACGCCTGTATAATTGGCCATTTATTCATGTGTGAAAAGGAAAATGTCATGTACTTGTAATTCAGTGCAGGATTTTGCTCAGTGAACGCCAAAGTGGCCAACTGGACCAATTAATTGGTCAATTAATGGTTAATCGTCTTATTAATCCGCTCAATCAACGCATTAAGACAAGTAATCTTCTCTAGTGTGTATGGGCCTGTAGCTTGCAGCTGGCTCAATTAATTCTAAGTTAGGGCAAGTTAGCAGACACGTTGCTTCCTTGGCTAGCTTCCACTTGTTTTGCAGCATAATTATTATGGTGCTGCTTTCCACTTTGTTTCTAGTATTCCAATGTACGATCATAGCATGATGTGCAGCAAAAAATAGTTTATGCATTTCATAGTCAACAAGAAGGTTGAAAACATTGTGTATGTATGACCCATATCTTGTTACTGAGTATCATCATTAGTTACAGATTATTGATGATATTTCCCTATTTGATTTGTTACAGTACAAATGGCTAGTACAAGAAAATGTATTTAAATATCTCCAATAACAAACAACTAGCAAATACTACCTCCGTCCCAAAATAAGTGTAGCCATAGATATCCGTGTCCAACGTTTTAACCGTCCGTCTTATTTGAAAATTTTATGAAAAAAATTAAAAATATTAGTCACACATAAAGTACTATTCATGTATTATCATCTAATAACAATAAAAATACTAATCATAATTGTTTTTCAAATAAGACGAACGGTCAAACGTTGAGCATGAATAGTGTTAAAACTGCACTTATTTTGGGACGGAGGGAGTATATATTAATTTATATGAACGTTAAATATCCGTAGAATTCTGAATAATCAACCATATTATGACTATTTGCTTGATGCCTTGACGGTACATTGTCTGTTCGATACCCATTTTCGGACTTTTGCAACACTGCTGCAAAGAATTACTGTACAAAGCTACGTAGTCAGCAGCTCAGCATCGACAGCAGGAACACGTGTTATTTATCAACTCTCTATTGTTCTCTTTAAAACTTGTACTGCATTAGTTTCTCAATATGTTGATTGTTCAGGCTATTGTTTTCTCTATCTGTATATATGTTGAAAATTTTGTGTTCATTTCTTGAAGAATTAAGTTACTAACTGTGCTAAATTTCTCTAGGGATTCTGCCGAAGTATTTCAGTTCAGAGTGGTCATTTGCTCAGTTCCATTTACCAGAAGTCACACGTTACATAGTAGCGTTTGGTGCTCAAAACACTGTCATGATGGTTGGCCTGGATGGCAGGTACTTGCCTCTACACTGAATTTTATATCAGCAACGTAACACATGAATGGAATATACATCCCCAGTGCATGCTATAGCAGGCTAAGCAGCTGTACAGTCAACCTTTGCTGTTCTCAGTCATTGCACAAGTATACTGTACATGACGTATTAACTTCATAATACCACATACTTAGAAATTCATAAGCAAACAAATATACTCGTAGAAAGAGGACAATACGTGGTGCAGGATAGTACAGTATAAAAAGTTGTTCTTAGCTAATTTATTTGATTTATTAGATATTTTCCTATAGCAGATAGCTATCTCTGCATTTTCCTGCTGCATTTGGTTGAAATTTTCGCCAATTAATTGAGTCGAACCTTGGCTTTTTCAGCTTCTACAGGTGCAGCTTTGACCAGGTTAATGGCGGGCAGATGCTGCAGAAGGAATATTTCCGGTTTATCAAGGCTGACCTCACCCCCCTGAGGACCTCGGCCCCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002856