BGIOSGA002888

From RiceWiki
Revision as of 10:43, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002888| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002888, complete gene.| tag = P0406H1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA002888

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002888, complete gene.

LocusTag

P0406H10.17

Ensembl Transcript ID

BGIOSGA002888-TA

Ensembl Protein ID

BGIOSGA002888-PA

Length

3832

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:4595471..4599302

Sequence Coding Region

4595471..4595726,4597580..4597830,4597912..4598081,4598409..4598606,4599143..4599302

Genome Context

<gbrowseImage1> name=IndicaChromosome01:4595471..4599302 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:4595471..4599302 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAACCCGGGGCGCCCGGCGCCGGCGTCGTTCCGCGACCGCACCAACGAGTTCCGCGCCGCCGTCGAGAGCGCCGCGCGCTACGCCTCCTCCTCCGCGGCGGCGGCGCCCAGCAGCAGCAGCGGCGGCGGCGTTGGCGGCCCCCTCGACGTGTCGCGGGGGGCGGCCTCGGCGCACTCGGAGTTCAACCGCCGCGCCTCCAAGATCGGGCTCGGGATCCACCAGACCTCGCAGAAGCTCGCCCGCCTCGCCAAACTGGCAAAGAGGACATCTGTTTTTGATGACCCTACGGTAGAGATACAAGAGCTGACTGCAGTTATCAAGAAAGATATCACTGCTTTGAATTCTGCCGTTGTAGACCTACAGGTTCTCTGCAATTCACAAAATGAGAGCGGCAACCTTTCCAAGGATACAACAAATCATTCCACTACAGTTGTGGACAATCTAAAAAATCGCCTGATGAGCGCAACAAAAGAATTTAAGGAAGTTCTTACCATGCGGACAGAGAACTTGAAAGTTCATGAGAATAGAAGGCAAATGTTCTCATCATCAGCTGCGAACAATGCATCAAATCCATTTGTTCGTCAACGTCCCCTTGTTACCAGGGATGGTCCTGAATCCTCTGTACCCCCGGCACCATGGGCCAGTGATTCTGCCACTACTCCATTGTTTCAGAGGAAGAAGACTAATGGAGATCATGGAGCATCATCGTCATCTTCTCAGCCATTCATGCAGCAGCAGTTAGTACAGCAGGATAGTTACATGCAGAGTAGAGCGGAGGCTCTCCAAAATGTTGAATCAACCATCCATGAGCTAAGCAACATTTTTACACAACTGGCAACTATGGTTTCTCAGCAGGGAGAGCTAGCAATCAGAATTGATGAGAACATGGATGACACACTAGCCAATGTTGAGGGAGCTCAGGGCCAGCTACTGAAGTATCTCAACAGCATTTCATCGAACCGGTGGCTGATGATGAAGATATTCTTTGTGCTGATGGTTTTCCTCATGATCTTTATATTCTTCGTTGCATGA</cdnaseq>

Protein Sequence

<aaseq>MNPGRPAPASFRDRTNEFRAAVESAARYASSSAAAAPSSSSGGGVGGPLDVSRGAASAHSEFNRRASKIGLGIHQTSQKLARLAKLAKRTSVFDDPTVEIQELTAVIKKDITALNSAVVDLQVLCNSQNESGNLSKDTTNHSTTVVDNLKNRLMSATKEFKEVLTMRTENLKVHENRRQMFSSSAANNASNPFVRQRPLVTRDGPESSVPPAPWASDSATTPLFQRKKTNGDHGASSSSSQPFMQQQLVQQDSYMQSRAEALQNVESTIHELSNIFTQLATMVSQQGELAIRIDENMDDTLANVEGAQGQLLKYLNSISSNRWLMMKIFFVLMVFLMIFIFFVA</aaseq>

Gene Sequence

<dnaseqindica>1..256#2110..2360#2442..2611#2939..3136#3673..3832#ATGAACCCGGGGCGCCCGGCGCCGGCGTCGTTCCGCGACCGCACCAACGAGTTCCGCGCCGCCGTCGAGAGCGCCGCGCGCTACGCCTCCTCCTCCGCGGCGGCGGCGCCCAGCAGCAGCAGCGGCGGCGGCGTTGGCGGCCCCCTCGACGTGTCGCGGGGGGCGGCCTCGGCGCACTCGGAGTTCAACCGCCGCGCCTCCAAGATCGGGCTCGGGATCCACCAGACCTCGCAGAAGCTCGCCCGCCTCGCCAAACGTATGCCGCCTCCCTCCTCTTCGCCCCGCCTGCCCTCTCTCCGTTGCTGGGATCTCGAACCCCGCGCGCTGTAGATCTCGTCCTCGATGGAATCGTAGCCTAGAGGAAGTCTGTCGCCATGTATGGATGATTGATTAGTTATTACTGTATGTGCGGTCTCCGATGATTAGTTAGATTTTTTTTTTCTGAACTATATATGTATGCTTGCTTCCAGAGTTGCAGTAACAGTAGGACTCGTTAGATTTTTTTTTCTAGCTACAATATTTCGATTACATCTCTCAGCTATGGTGATTGATTGTTCTTCCAGTGCCCAATCAGCCGATGCAATTAGGGGGTATCTTGCTTTCTCTAGTGTTGTCTCCTGTCTAGTCAGGAACTCACGATGTGGTGTTCTGCAATGGAGCCCAACTAGAGAATTCCCGGTTTTATTCTGGTTTCTTGTTCCTTATTAACATTTCCCACCAAATCACGATCCCCTCCTCTGCCACCGCTTTGCTCCTCCCCCACAGAGACCGAACCAACCGCCACTCTCTGCCCCATCACGCCCACCAAGGCGCCTAGATTCAGATACTGATCCAGCTCCCTTGTGTCCGCCATGACCATGAACCTGATGAGTCCCGTTCTGGTGTCATTCCGTGATCGCACCAATGAGTTCCATGCCGCCGTCGAGAGCGTGGCGCGCTACAGCAGCGTTGGCGGCCCGATTGTATGGCTCTTCACTACCCTCCTGTTGGTCTCTCTTATGCTTGCATCCTTGCCAATTAGTTCAGCTGCCGGTTTCCTGGCATACTATTGGGTTGGGATCTCGAGATGCCCATGCTGTAGATCTTATCTCGATGCCGTGGCAGCCGATTATTGCTATCTGTTTGTGCTTGTAGTTGCCATAGGACTAGTTAGATACTCTAAAAATGTGCTTGCTTGTTATTTTGTGATATTTTGATTACATACTTCCTCTGCCATGCTGATTGATCTTCTGGTGCCCACTCAACCCATGCGGTTAGTGGGTATTGTGATTTTGCTCACGTTGTTTTGTGGGTAGTCAGGATGGGGTATTCTGCAATCGTGTTCCCATGGTATAAACAATGAGTCCCATCATGTCATGAATTGCATACTTTGGGGGATTACTAAATCAAACAGTTGCTAATAGGCTGCTGATTGATTCATCACCATGTTCTCAAGAAGCTAATATGGGCATTCTTTCTTCTCTTTGAACTGGATGCATCGGTAGTTTGCATGTGTTATGGGGGGTACAATGGTATTCAACGTGAACTAATCATATCTGCTCAAAGATGCGCTGCGAGGGCCAATAGTTGGTTGGAGCTCTTGCGATAGTGACTGTTGCTTTTAGATGCTCTAGCTCCTGATGGATTTGGAAATTAAATGTATCTTGTTCGTGCATACTTTCCTCACATGGTGTTTTATAGCTGGCAAATAAGCATTGATGCACATGACTTCTTCATACTTTATTAATTGTGCAAATAATATGTTTCTAGAATCCAAGTTATGTAATCCCTTTTTATTTGGCACATTATATGTTGCCTTAAACCGTGTTGATCATCATCTGCAGATTTTTTCTCAGCTATGATTCATTGGTTCTATCTTTGACTCCTTGAGATTTAGTTAAGCACATAGGTATTAATGATGTTGTATGTGATATTTTCATTACCATAAAGCCTCAACAACGACCTAGTGTTATTGTCTCAATACTTCACTAAGAATTAGATGGATATAACCTTTGATGGACACAGCCTCAACGCTTGAACGTACAAATACTTATTTCAATGCTCTGCTAATATTTAGGCTTTCCTTTGACACTGTAGACCTTGCTAATCTATGACTTGGATTGTTTGCAGTGGCAAAGAGGACATCTGTTTTTGATGACCCTACGGTAGAGATACAAGAGCTGACTGCAGTTATCAAGAAAGATATCACTGCTTTGAATTCTGCCGTTGTAGACCTACAGGTTCTCTGCAATTCACAAAATGAGAGCGGCAACCTTTCCAAGGATACAACAAATCATTCCACTACAGTTGTGGACAATCTAAAAAATCGCCTGATGAGCGCAACAAAAGAATTTAAGGAAGTTCTTACCATGCGGACAGAGGTAAATATATGCCTTCCTGTTTCCTTTTGATAGTCTTCAGTAAAAATATATTACTTAGTTTGTTTATTTTTGAATGCGCAGAACTTGAAAGTTCATGAGAATAGAAGGCAAATGTTCTCATCATCAGCTGCGAACAATGCATCAAATCCATTTGTTCGTCAACGTCCCCTTGTTACCAGGGATGGTCCTGAATCCTCTGTACCCCCGGCACCATGGGCCAGTGATTCTGCCACTACTCCATTGTTTCAGAGGTATAAAATTTGCTCATATTTATGCAAAGTGCAATTGTTAAAGTTCCTTTGGGGAATGTGCTCATACCCAATAGAAAAACACACTAGCCTAGCCTACCATCTTGCTTGCTAGATTTTGGTTAACCTATCTAGGCTAGTAACTGCAGTTAGCACTTGCATGCAAATGTGCAATAAACTGCTTGTTACTCCAGTTATTTTCCTTAAACAACTCATTGTACAGTCTCAATGCTATCCACTAAGAACAACTCAATGATACTTTGCCGAGTTCAGTTGGTAGTGTGGTTTTAGTTTTTTTTTTAAAATGTTTTTTGTGTTTCTGTTCACCAGGAAGAAGACTAATGGAGATCATGGAGCATCATCGTCATCTTCTCAGCCATTCATGCAGCAGCAGTTAGTACAGCAGGATAGTTACATGCAGAGTAGAGCGGAGGCTCTCCAAAATGTTGAATCAACCATCCATGAGCTAAGCAACATTTTTACACAACTGGCAACTATGGTTTCTCAGCAGGGAGAGCTAGCAATCAGGTTAACACTCTTTTACAAAAGTCTGTTCCATTTAATTCATGAGTTGGCTGTCTTATGCCTATGGTCAAGTTCATATCATTATTTTGAATAATTGTTATAAGCTTCAAGATATGCTGTGATCTCATTGTGGGGAGATTCCCATTGTGCGCTAAAGAGATGAACATTTTCCTGAAATTCAGTGAATAGACTGTTTTGCTCCTGGTCTCAAAATTTCCACTAATGGCGTAACTTGAGAATAGTTGAAAAACCTTTGAGGACCTAAATTCCAACTAGATTTTGTATGTCAGCAATGATTTAGAGTAAGAATAGGTTTCCATATATTTATCAATTATTATGGCCATTGGCCAGTTCTTCACTCTTAGAATTTTTCTAGTCCATGTTGATGTCTTGTTCTCTCAGTGCACTACATTTAGGATTCATGCATAGGGCTGAGGAAGGAGTAGCTGTTTCATGTCAAATTGTTTATCTCCTCACATACTAGCTTTTCTATTTTCCTGAGATTATGTTGTGTTTAAAATTCGCACAATCCGTAACAGAATTGATGAGAACATGGATGACACACTAGCCAATGTTGAGGGAGCTCAGGGCCAGCTACTGAAGTATCTCAACAGCATTTCATCGAACCGGTGGCTGATGATGAAGATATTCTTTGTGCTGATGGTTTTCCTCATGATCTTTATATTCTTCGTTGCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002888