BGIOSGA002894

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Revision as of 10:43, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002894| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002894, complete gene.| tag = OsI_006...")
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Gene Name

BGIOSGA002894

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002894, complete gene.

LocusTag

OsI_00657

Ensembl Transcript ID

BGIOSGA002894-TA

Ensembl Protein ID

BGIOSGA002894-PA

Length

6743

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:4749158..4755900

Sequence Coding Region

4749158..4749299,4751306..4751609,4751795..4752411,4752672..4752818,4753616..4753730
,4754456..4754604,4754864..4755900

Genome Context

<gbrowseImage1> name=IndicaChromosome01:4749158..4755900 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:4749158..4755900 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCACCGCCAGAGCCGAACAAGGACAAAGCGCTGCCGAAGCCGAAGCCACCCAAGCCCAAGCCCCAAGCCAGAGCTGAAGCTGAACACGCGGTCGGCATTGGCGCCGGAGCACGACCAGACGGCCGGCCCCTACGGCACGGGAAATTTATGGAAAAGTATTACAAGAGAAAATCTCCATCACATGGAGAAGATGTTGCCCCATCGCAGCCATCACACAGACATAATGCTGCTACATTTAATAGAAGAGATGTTCCTGAAGATATCAATTGGGAAGTGGAGATTCAATTTGATCCTGGCAAAAGGAAAAGAATTGAGGATTATCATCCCAATCAAAAGGAGATGGTAAGAAGAAAATACTTGGACAATGGGCCTTGTCAACCTCGTCCGGATGATCTCCCTGTTACAAATATTGGTGGTAGAGATAGAAAATTTAATCCTGAATGTGTTCATAACCAAGCAATGAGGGATTGTGATGCTTTACTGAAAAAAGAGCAGCACATTGATGTTTCTTTGAACAACCAAAGTAATGCTGAGAAAATTGCTTATTATACTCGGTTAAATGGCTCAATTGATGTTACTAGAATCTTACTGAAGCTAGGTATGCCTTTTCGGGGCCATGATGAGAGTGAGGAGTCTCTCAATAAAGGAAATTTCAAGGAATTTCATGCTTATACCGCAGAGCAAAATCCAGCTTTACACAAGGTTGCAGGTAAAAATGCTCCTGGTAACAGTCAGTATACATCTTCAAAGATTCAAAATGACATCATACGTTGCTTTGCAAAAGAGGTACTGCGTTATATTCTTGAAGAAGTTGGGAATGATGTTTTCTGCTTGCTGGTTGATGAGTCAAGGGATGTGTCTTACAAGGAACAAATGGCAGTGGTCTTGCGTTATGTTGGTAAATGTGGCAGTGTTAAAGAGAGACTAGTTGGCCTTGTTCATGTTAAAGAGACGACATCTATGTACCTTAAGTCTGCCATTGATGATTTATTTGCGGAGCATAAGCTAAGTTTGAAACAAGTGAGAGGACAAGGATACGATGGTGCTAGCAACATGAGAGGATTGAATCAGGAAATATCCCTTCAAAGGCCTGGAGATACTCGTTGGAGCTCTCACTATAAGACACTGAAGAGTTTGGTTCAATTGTTCCCTACAATTGTTAAAGTTCTAGAGTATGTGGAAGAGAATGACAGGGATGACAAAAATCATCAAGATCAAGGGCTGGGCACCCGCGCGGCCGACTACACGCTGCGTGTAGGCCACGGCGAGCGGGCATTCGCGTACGCTCGACTTCCAGTCTTCCACAAGTTGCAACTTACAAGTGTTAAAGACAGACTAGTTGGCCTTGTTCATGTTAAGGAGACGACATCTATGTACCTTAAGTCTGCTATTGATGATTTATTTGCGGAGCATAAGCTAAGTTTGAAACAAGTGAGAGGGCAAGGATACGATGGTGCTAGCAACATGAGAGGATTGAATCAGGAAATATCCCTTCAAAGGCCTGGAGATACTCGTTGGAGCTCTCACTATAAGACACTGAAGAGTTTGGTTCAATTGTTCCCTACAATTGTTAAAGTTCTAGAGTATGTGGAAGAGAATGACAGGGATGACAAAAATAGTAGGCAAGCAGCTGGCCTCCTTGTTTATTTTCAGTTATTTCAGTTTGTGTTTTATTTGCAGCTTATGTTGAATATCTTGGCAATCACAAACACCTTGTCCGTAACTTTACAAAGAAAGGATCAAGACATTGTCAATGCTGTTAATTGTGTAAAATCAACTAGAAATCGCTTGGATGAGTTTAGGAGGAGTGGTTGGGAATCTATTTTAGCTGAGGTGCATAACTTTTGTGAGAAGTATGACATTTCAGAATTGGAGATGGAAGATGCATACATAAATCCAAAGAGGCCACGCCAAAAAACTGGGATTACAAACAAGCATCATTTTGAAGTTGATTGTTTTAACGAAATTGTTGATTGGTTGCTTCAAGAATTGGACAATCGCTTTGATGAGAAAACATCTCAGTTACTCATATGTGCAGCTGCCTTAAGTCCTAGGCAATCATTTCATGATTTCAATTTAGAGCATTTGATGAGTTTAGCAAAACTTTATCCAAAGGATTTTGATGATGGGGAACTAATGGATCTTAGACATCATCTTTCTCTTTATATCGCTGATGTGCGTGGAGATGATAGATTCGCTAACATTGAAACTATATGTCAGCTTTCCCAAAAAATGGTGGAAACAAGAAAACATATTTGCTATCCATTGGTTTACCGGCTTTTAGAGCTAGCATTGGTTTTGCCTGTTGCCACTGCTACAGTTGAAAGATGTTTTTCAGCCATGAAAATTGTGAAGACGTATTTGCGCAATCGCATTAGTGATGAACACTTGAGTGATTGTGTTATTTGCTATGTTGAGAAACAAGAATTGATGAAAGTTACCAACAGTGCAGTAATTCACCGATTTGAGACCTTAAAGGCACGTTTACATGATGTTTTTACTAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MPPPEPNKDKALPKPKPPKPKPQARAEAEHAVGIGAGARPDGRPLRHGKFMEKYYKRKSPSHGEDVAPSQPSHRHNAATFNRRDVPEDINWEVEIQFDPGKRKRIEDYHPNQKEMVRRKYLDNGPCQPRPDDLPVTNIGGRDRKFNPECVHNQAMRDCDALLKKEQHIDVSLNNQSNAEKIAYYTRLNGSIDVTRILLKLGMPFRGHDESEESLNKGNFKEFHAYTAEQNPALHKVAGKNAPGNSQYTSSKIQNDIIRCFAKEVLRYILEEVGNDVFCLLVDESRDVSYKEQMAVVLRYVGKCGSVKERLVGLVHVKETTSMYLKSAIDDLFAEHKLSLKQVRGQGYDGASNMRGLNQEISLQRPGDTRWSSHYKTLKSLVQLFPTIVKVLEYVEENDRDDKNHQDQGLGTRAADYTLRVGHGERAFAYARLPVFHKLQLTSVKDRLVGLVHVKETTSMYLKSAIDDLFAEHKLSLKQVRGQGYDGASNMRGLNQEISLQRPGDTRWSSHYKTLKSLVQLFPTIVKVLEYVEENDRDDKNSRQAAGLLVYFQLFQFVFYLQLMLNILAITNTLSVTLQRKDQDIVNAVNCVKSTRNRLDEFRRSGWESILAEVHNFCEKYDISELEMEDAYINPKRPRQKTGITNKHHFEVDCFNEIVDWLLQELDNRFDEKTSQLLICAAALSPRQSFHDFNLEHLMSLAKLYPKDFDDGELMDLRHHLSLYIADVRGDDRFANIETICQLSQKMVETRKHICYPLVYRLLELALVLPVATATVERCFSAMKIVKTYLRNRISDEHLSDCVICYVEKQELMKVTNSAVIHRFETLKARLHDVFTK</aaseq>

Gene Sequence

<dnaseqindica>1..142#2149..2452#2638..3254#3515..3661#4459..4573#5299..5447#5707..6743#ATGCCACCGCCAGAGCCGAACAAGGACAAAGCGCTGCCGAAGCCGAAGCCACCCAAGCCCAAGCCCCAAGCCAGAGCTGAAGCTGAACACGCGGTCGGCATTGGCGCCGGAGCACGACCAGACGGCCGGCCCCTACGGCACGGTGCGTGCGACGACGGGAAAGCCGGAAAGAGAGAAGAGAAGGAAACCCTACCCTAACTTTGAAAGAGGAGGGGAGAGGGGGAAGGGAAGCGTGCTCATTGGAGAGAAGGTGGCGGCCGGAGAAGAGAGCTGTGTCGTCGCCGTCGCCGTAGCCGTCGCCTCTAGGTCGCGCCGTGCTCCGCCCCCGCCGTCGCGTCTGTGTCTTCGTAGCGCCGCCGCTCCTCTCGAGGAATTTTTCCGCTCCTCTCGGGTAGGTGATTTTTTCCTGGGCCTACAGAACAGGGAAATCCCGTGGTGGGCTGGGCTAAAATCCATGCTAGGGATTAACCGAAGGAATAAGTCCACTTTGACTCCCTTAAAAGTAACCTGAATCTAATCCGTAACCCTCAACCGCAAAACCGGATAGAACGACTCCCCAAACTATTGAAACCGGTGCAATTTGACTCCCTTAACGATTTTGGACGGTGGTTTCACTACGTGGTGCTTACGTGACGGTGTTGATCTAGGCTGGTCTTGATGTGGCGCTTAGGTGACATTTAATTAAAAACATATTTGTGGGACCCATTTGTCATTAAAAAAAGTGGGGCCCACTGACATGTCATCCTCTCTCTTTCTTCTTCCTCCCTCCCTTTCTCCCTTCTCTCTTTCTCTCCCCTTCCACCGTCCACGGGAGCACGGCTGGAGCGGCGGCGGGGCGGGGGCCGAAGTACTGGCGGCCGGCGGGAGCTGAAGCGGCGGCGGGTTGGAGCTAACGCGGGTGGAGGCGGAGCAGAAGGAGGCGGCGACAGGAGGGGCTTGAGTGGCGGCGACGGTGGAAACCGCCCCACGCCACAGACCTCCAACGAGGCGGCTGCGGCTGCCTCTGACTAGCGCGCTGGATTATTCCTAGCCTCCGTCAGCTCCAGCCCACTTCCGCCGCCCGCCGCTCCAGCTAGCTCCCGTGTCAGCTCCTGCCGGCCGTCACCACTCCGGCTCCTGATGACGGGGAGGAGCCTCGACAACGGGAACAGGTCAGCGACGCCGAACCTAGTCGCCTTCTTCTGCGCCTCACCCAGCGTCTCCAGGAACTCCTCACGCCATCGGAAGCCGCACTCCCCCATGATGGCGCGCAGCGTCAAGTCGGTTAGCGTCCCGGTGATCTGCCTGCTCACGTTCAGTGCCGGCAGCGGCGGTGATGGCGCCAAGGAGCGCACCCGCCAAAGAGTATCCCCACCGTGGTGTCGATAGAGTCCCTCACTGTACGCCCAGCCATAGAGGTCAAAGCCCCCGGGCCAGGCGCCAGGAGGAGGCCGAGCTCCATGAGGCGGGCCTTTGTAGGCCTAACAGGTGTCACCGGACACCGGGTAATTTTTTGTGTCAAGTTATAGTATATAGGTATATACAGCATGGGACACACCAAAAAAATGGATTGGACCCGGGCTGTCCAGATCACTTACTATCGCCCATTTATTGTAACAATCCATCAAAGCTCACGTTAGCCAATCTAGAGCCCAACTATTCGTGGGAAGGTGAAACGACCCCGTGTATCTCGAGACTGAATTAACTGCGTCTCCGGCTCTCCGCTCCTTTTCCTCATCAGTCGTCGATACTCTTCGAGACTCGAGACACTGAATCGCTGCTCTTGCTCGATCCTTCTTTTCGCTCAATCGCTGCTCTACTCAGATCAAGATCAAGATCAAGCACCGCGCCCGCGCGGCCGACGACACACTGCGTGTAGGCCACGGCGAGCGGCAACAGCATGCATTCGCGTACGCTCGACTTCCAGTCTTCCACCAGTTGCAACTTGCAAGGTTTGTTTTCTACCATTAGTCCAGAATTCAGATTATTGGATTAGGACATTAGTTCATTCAATATTCTTTAGTGCTGTCAGAGTAGGAGCATCAAAACATTTTAATTTACTCAATCATTTTTTAGTTGTCCACATTCTGTATCGCTGCTTACTGATTGGTGCTTGCACTAGAATAACTGGTTGGCAGTGAGCTAAGTGGTTAGCTAACTGATTGACAGGGAAATTTATGGAAAAGTATTACAAGAGAAAATCTCCATCACATGGAGAAGATGTTGCCCCATCGCAGCCATCACACAGACATAATGCTGCTACATTTAATAGAAGAGATGTTCCTGAAGATATCAATTGGGAAGTGGAGATTCAATTTGATCCTGGCAAAAGGAAAAGAATTGAGGATTATCATCCCAATCAAAAGGAGATGGTAAGAAGAAAATACTTGGACAATGGGCCTTGTCAACCTCGTCCGGATGATCTCCCTGTTACAAATATTGGTGGTAGAGATAGAAAATTTAATCCTGAATGGTATGATGAGTTTGGCAGTTGGCTTGAGTATAGTGAGTCCAAAGATAAAGTTTATTGCTTTTATTGCTTTTTGTTCAGTGACCCTAATAAGAAATCAGCAGGTTATGAGGCATTTGGTTACAAGTGGNTGTTCTAGTTGGACACAAAAAACACAGATTGAAGGAACATGTTGGTGATATTGATAGTGTTCATAACCAAGCAATGAGGGATTGTGATGCTTTACTGAAAAAAGAGCAGCACATTGATGTTTCTTTGAACAACCAAAGTAATGCTGAGAAAATTGCTTATTATACTCGGTTAAATGGCTCAATTGATGTTACTAGAATCTTACTGAAGCTAGGTATGCCTTTTCGGGGCCATGATGAGAGTGAGGAGTCTCTCAATAAAGGAAATTTCAAGGAATTTCATGCTTATACCGCAGAGCAAAATCCAGCTTTACACAAGGTTGCAGGTAAAAATGCTCCTGGTAACAGTCAGTATACATCTTCAAAGATTCAAAATGACATCATACGTTGCTTTGCAAAAGAGGTACTGCGTTATATTCTTGAAGAAGTTGGGAATGATGTTTTCTGCTTGCTGGTTGATGAGTCAAGGGATGTGTCTTACAAGGAACAAATGGCAGTGGTCTTGCGTTATGTTGGTAAATGTGGCAGTGTTAAAGAGAGACTAGTTGGCCTTGTTCATGTTAAAGAGACGACATCTATGTACCTTAAGTCTGCCATTGATGATTTATTTGCGGAGCATAAGCTAAGTTTGAAACAAGTGAGAGGACAAGGATACGATGGTGCTAGCAACATGAGAGGTGAGTTCAATGGTTTGCAATCACTAATTATGAGAGAAAATAGCTCGCCATATTTATATTCACTGCTTGGCACACCAGCTTCAGTTAGTAGTTGTGGCCATTGTAAAGAAACATAAAGGAATCGGAAACTTTTTGGATATGATTTCTCTTTTATTAAATGTGGTTGGTGGATCTTCCAAGAGAAGGGATATGATTCGAGATATAAATCCAGAACATGTGCATGATGCTTTAGAATGTGGGTTACTTATAACTGGTTCCAGGATTGAATCAGGAAATATCCCTTCAAAGGCCTGGAGATACTCGTTGGAGCTCTCACTATAAGACACTGAAGAGTTTGGTTCAATTGTTCCCTACAATTGTTAAAGTTCTAGAGTATGTGGAAGAGAATGACAGGGATGACAAAAATCGTAGGCAAGCAGCTGGCCTCCTTGTTTATTTTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTCTCTCACTTCTCTCCTCTTGGGCAGGCCGGCCGGCGGGTGGGGAGGAGCCGAGGAGATCCTGCGTAACAACGCCTAGCACGAGGCGGATGACGGTCAGCCTGATGGCGCCGTCGTTCTTGGCGAGGCGGCACGCGAAGTTGCCGACGAAGGAGACAGTGACGAGCAGCAGCACTAGCCATCGACCTTGTCGCCTGCGACAACCTCACCGTCCCGCGCTGCTGCGCCAGCCCCTCGCTGCCTCAGGTCACTGTGGTGGTGGCCGTGGCGCTCGACGCGTGTCACGGTATGGCCTGCCTAAGAGGATAGAAGTGATAGAGGGAGAGAGAGGAGGAAGGGAGAGAGATGACGTGGCATCCTGATATATGGGGCCCACATGGGTTCCACGCCGACTTAGCTGCCACGTAGGATAACCGGGGTCAAAACCACTAAAGGACCTATTATGACCGGTTTTGATTAGTTAAGGAACGCTGGATATCTGGGTTTGCGGTTGGGGGACAATTTTGTAACTCGATGACCAGGGACCTTCCATGTACTTTTTCCAAGGTGAAACGATGCTCTGAAGTCCAAACCGTGTATCTCAAGACTGAATTAACTGCGTCTCCGGCTCTCTGCTCCTTTTCCTCGTCAGTCGTCGGTACTCTTGACTTGAGACACTGAATCGCTGCTCTTGCTCGATCCTTCTCCTTCGCTCAATCACTCCTCTACTCAGATCAAGATCAAGGGCTGGGCACCCGCGCGGCCGACTACACGCTGCGTGTAGGCCACGGCGAGCGGGCATTCGCGTACGCTCGACTTCCAGTCTTCCACAAGTTGCAACTTACAAGGTTTGTTTCCTGCCATTAGTCCAGAATTCAGATTATTGGATTAGGCCATTAGTTCATTCAATATTCTTTAGTGCTGTCAGAGTAGGAGCATCAAATCATTTTGATTTATTCAATCATTTTTTTTTGGTTGTCCACATGCTGCATCGCTGCTTACTGCTTGCACTAGAATAACTGGTTGGCAGTGACCAGTGAGAAGTGGTTAGCTAACGTTGGTGATATTGATAGTGTTCATAACCAAGCAATGAGGGATTGTGATGCTTTATTAAAAAAAGAGCAGCACATTGATGTTTCTTTGAACAGCCAAAGTAATGCTGAGAAAATTGCTTATTATACTCGATTAAATGGCTCAATTGATGTTACTAGACTCTTACTGAAGCAAGGTATGCCTTTTCGGGGCCATGATGAGAGTGAGGAGGTCTCTCAATAAAGGAAATTTCAAGGAATTTCATGCTTATACCGCAGAGCAAAATCCAGCTTTACACAATTTTTTTTGGGGAAGATTTACACAAGGTTGCAGGTAAAAATGCTCCTGGTAATAGTAATAGTCAGTATACATCTTCATAGATTCAAAATAACATCATATGTTGCTTTCCAAAAGAGGTACTGTGTTCTATTCTTGAAGAAGTTGGGAATGATGTTTTCTGTTTGCTGGTTGATGAGTCAAGGGATGTGTCTTAGAAGGAACAAATGGCAGTGGTCCTGCCTTATGTTGGTAAATGTGGCAGTGTTAAAGACAGACTAGTTGGCCTTGTTCATGTTAAGGAGACGACATCTATGTACCTTAAGTCTGCTATTGATGATTTATTTGCGGAGCATAAGCTAAGTTTGAAACAAGTGAGAGGGCAAGGATACGATGGTGCTAGCAACATGAGAGGTGAGTTCAATGGTTTGCAATCACTAATTATGAGAGAAAATAGCTCAGCATATTACGTTCACTGCTTTGCACACCAGCTTCAGCTAGTAGTTGTGACCATTGTAAAGAAGCATAAAGGAATCGGAAACTTTTTTGATATGATTTCTCTTTTATTAAATGTGGTTGGTGGATCTTCCAAGAGAAGGGATATGATTCGAGATATAAATGCAGAACATGTGCATGATGCTTTAGAATGTGGGTTACTTATAACTGGTTCCAGGATTGAATCAGGAAATATCCCTTCAAAGGCCTGGAGATACTCGTTGGAGCTCTCACTATAAGACACTGAAGAGTTTGGTTCAATTGTTCCCTACAATTGTTAAAGTTCTAGAGTATGTGGAAGAGAATGACAGGGATGACAAAAATAGTAGGCAAGCAGCTGGCCTCCTTGTTTATTTTCAGTTATTTCAGTTTGTGTTTTATTTGCAGCTTATGTTGAATATCTTGGCAATCACAAACACCTTGTCCGTAACTTTACAAAGAAAGGATCAAGACATTGTCAATGCTGTTAATTGTGTAAAATCAACTAGAAATCGCTTGGATGAGTTTAGGAGGAGTGGTTGGGAATCTATTTTAGCTGAGGTGCATAACTTTTGTGAGAAGTATGACATTTCAGAATTGGAGATGGAAGATGCATACATAAATCCAAAGAGGCCACGCCAAAAAACTGGGATTACAAACAAGCATCATTTTGAAGTTGATTGTTTTAACGAAATTGTTGATTGGTTGCTTCAAGAATTGGACAATCGCTTTGATGAGAAAACATCTCAGTTACTCATATGTGCAGCTGCCTTAAGTCCTAGGCAATCATTTCATGATTTCAATTTAGAGCATTTGATGAGTTTAGCAAAACTTTATCCAAAGGATTTTGATGATGGGGAACTAATGGATCTTAGACATCATCTTTCTCTTTATATCGCTGATGTGCGTGGAGATGATAGATTCGCTAACATTGAAACTATATGTCAGCTTTCCCAAAAAATGGTGGAAACAAGAAAACATATTTGCTATCCATTGGTTTACCGGCTTTTAGAGCTAGCATTGGTTTTGCCTGTTGCCACTGCTACAGTTGAAAGATGTTTTTCAGCCATGAAAATTGTGAAGACGTATTTGCGCAATCGCATTAGTGATGAACACTTGAGTGATTGTGTTATTTGCTATGTTGAGAAACAAGAATTGATGAAAGTTACCAACAGTGCAGTAATTCACCGATTTGAGACCTTAAAGGCACGTTTACATGATGTTTTTACTAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002894