BGIOSGA002909

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Revision as of 10:43, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002909| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002909, complete gene.| tag = P0510F0...")
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Gene Name

BGIOSGA002909

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002909, complete gene.

LocusTag

P0510F03.12

Ensembl Transcript ID

BGIOSGA002909-TA

Ensembl Protein ID

BGIOSGA002909-PA

Length

3825

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:4924863..4928687

Sequence Coding Region

4924863..4924920,4925029..4925090,4925172..4925234,4925552..4925627,4926365..4926432
,4926890..4926991,4927138..4927227,4927372..4927446,4927548..4927580
,4928133..4928207,4928373..4928432,4928595..4928687

Genome Context

<gbrowseImage1> name=IndicaChromosome01:4924863..4928687 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:4924863..4928687 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCTAGTGCAGGTGGGTATGGGGTTGGGCCGCGTCGTCCTCCTCGTCGGCGCCGGCATGGCCGGCTCGGTCGTCATCCGCGACGGCCGCTTCGCCGACTTCGTCGCGGGGCTCCAGGAGGCTCTGCGCGACAACGACGGCGGCGGCGTCATCGATCAAATCGAAGAAGCCGTCAAGAAGGCGACTATGGAGGTTAATCAGATGATAAGTCAACCAGTTACTGTCATTACTGTAGATCCTGCAGGCAATAATGGAGTTGTGACAACGTTGATAGCACCTGCTGCAGCTGCTGGGGCGTTGACCTATGGTTACATGCGCTGGAAAGGCATATCTATTGCTAGTCTGATGTATGTCACCAAGCAAAATATGGCTAATGCTGTTGCAAGCATGACCAAGCATTTGGAACAAGTGCAGAGCTCTCTTGCAGCTGCTAAAAGGCACTTAACCCAGCGCATTCAACATTTGGATGATAAGTTGGATCAGCAGAAACAGATTTCCGGGCAAATAAAAGAGGAGGTTACTGGTGCACGATTGAAACTCCAGGATATTGGTTCCGAAATGCAAAAGATCAAACAAGTGGCTCATGGCCTGGGTGGAAAGTTGGATTCAATTGAAGCAAAACAGAACTATTCATTGGCCGGTGTGATGTACCTCGTCGAATTCATAGAGCAAAACGGTGGGAGGTTGCCTCGTAGCGTGGAACACTTGCAACGAACTGCCAGGCTCTCTGGAATTACTGGAGACCAAAAGCAGCTGCAGGGGCTCGGTCAGTTGCTGGCGATCGAGTCGGCGACTCCTGTAGGAAGTGGACTTCACTGTACCTCGGCACGGTTATTCAAGGCAGTGGTATGA</cdnaseq>

Protein Sequence

<aaseq>MALVQVGMGLGRVVLLVGAGMAGSVVIRDGRFADFVAGLQEALRDNDGGGVIDQIEEAVKKATMEVNQMISQPVTVITVDPAGNNGVVTTLIAPAAAAGALTYGYMRWKGISIASLMYVTKQNMANAVASMTKHLEQVQSSLAAAKRHLTQRIQHLDDKLDQQKQISGQIKEEVTGARLKLQDIGSEMQKIKQVAHGLGGKLDSIEAKQNYSLAGVMYLVEFIEQNGGRLPRSVEHLQRTARLSGITGDQKQLQGLGQLLAIESATPVGSGLHCTSARLFKAVV</aaseq>

Gene Sequence

<dnaseqindica>1..58#167..228#310..372#690..765#1503..1570#2028..2129#2276..2365#2510..2584#2686..2718#3271..3345#3511..3570#3733..3825#ATGGCGCTAGTGCAGGTGGGTATGGGGTTGGGCCGCGTCGTCCTCCTCGTCGGCGCCGGTGCGTAAACCTGATCCGATCGATCGATCTCTTCCTCCGATCCGATGAGTCTTGAGTTTTGATTTATTAGTTATTTGAATCCGCTGTTTGTTTCGATCGATCGTGCAGGCATGGCCGGCTCGGTCGTCATCCGCGACGGCCGCTTCGCCGACTTCGTCGCGGGGCTCCAGGTGCGTGTGCGATTCCGGCTTAGTTTCGCGACGTTGATCCGGCGGGGGATCTGATCGATTCGCCGTTGGTTTAATTTGCAGGAGGCTCTGCGCGACAACGACGGCGGCGGCGTCATCGATCAAATCGAAGAAGCCGTCAAGAAGGTAGTGGCTTGTACGTTTGCGTCTGTGATATCTATGCCTCTCCGTGGTGTTTAAGGCTTTAAGCTGATCGCGCGATGCGGATCATAGTGCCCGTGCGAATTAGATTCAATCAATCTTTGAGGGGGGGGGGGGGGGGCGCGAATGTGCGATCGATTGATTAATTGCTTGCTTGGTTGCAAACCTCATGTTTTAATTAATGCGTTTATAATCGAATTCGTTAACTGGATGCTGACATGCCAAGGCATTCGATTGCGTTGCTCGTCCACTTCAATTATGGGAACAACTTATCTAATTTGGCACTTTGTTCGTTTGTTCAGGCGACTATGGAGGTTAATCAGATGATAAGTCAACCAGTTACTGTCATTACTGTAGATCCTGCAGGCAATAATGGAGGTCTGTAGTTCCCCTACTTTGATTGTTTTTTTTTTCTTTTTGAACTTAAATAATCATCCGACCTATTCTTAAAAAATAATATATAATATATAAACCCATCCTAAATCATTATTTCTTAAACATATATACCGAATGAGGTATTCCCCATGTCTCAAAATATAAATATTTTTAAAATAGTGCTAAGTCAAATCATGTTTGACTATTAATAGATAAAATATAAAAAAGAACAATCAGTAAGAATAGTGTTATTAGATTTATCATTAAATAAACTATCATAATGTATAACTTTTTTTTATTTAAAACATCTTATTTTTTAAATATTTTTAGTCAAAAGTAGTATCTTAAATGCTTATATTTTGGGACGGATGGGGTAATTAACTACTAAGTACTTATTTGCCCCCAACTGCTATTATCATAAATTATCTGAAAGCCAAATTAAGTTATTTTTTTAATTTATGTCCTCCAAAACATATAACAGAGATAAAATGTTTGTACTATCATCTTCTAGCCTCTGGGCTTGGAGCCTTGGATAGTTGGATGTCTTGTCAGTTCGTACAAAATATTTGCTAACACTGAGTGAATTAGTTTCTTTAAAAACAAGAATAGAACAGTGAATTAGTTTCTTTAAAAACATGGACATGAATTTGTTCAATGAAATCTTTTGGGGGGATGCCTGTTCAAGTTCTGTTTAATCTGCACCTACATGATTGCAAACCTCTTTTTTTTCCTATTTGCAGTTGTGACAACGTTGATAGCACCTGCTGCAGCTGCTGGGGCGTTGACCTATGGTTACATGCGCTGGAAAGTACGTTTTTTTCTCTCTAATTGATGACTCTTATATGCTTCGATGATAATAATGTTAAAAACATGGTTTGGATCTTTCAGTTTTCCAACATTATATGCCTCACCGTTGCATTCACGTGGCAATTATTTCAATGTTCATGCGTAATATTGATATTCAGCTATGGTGATCTACTGATCTGATGTTATGTTATTCATGGAGTTCCTTCTTGTTAAATATGCAAGTCCCGTATCATTTCAAAACCTAGGTTATTGTCTTGCTAACATGTACATTTCAAAAGATTGATGTCTTTTGAAACATGTGTTTTTATTTGTACTTTCGAAACATGTGTTTTCTATATTATGCTCTCAAGGTTGTCTGCATAGAAGTTCTTGATTGATTCGATATTTTTAACTTTCTAATTTATTTGGTTTACATAGATATATAACCATATGTTTACTTTGTACCTGCAACCCTTCAGGGCATATCTATTGCTAGTCTGATGTATGTCACCAAGCAAAATATGGCTAATGCTGTTGCAAGCATGACCAAGCATTTGGAACAAGTGCAGAGCTCTCTTGCAGTAAGTCATCATTTTTCCATCTGAGATAAAGTAGTTTCTCTTTTTTCCGCATAAATGAGTAGTAACCCTGTTTTTAGGCCATGGTATCGTGTCTTATGATTGTTATTATTTTGAGATATATAACATTTCCCCCAAAAAATATGTAGGCTGCTAAAAGGCACTTAACCCAGCGCATTCAACATTTGGATGATAAGTTGGATCAGCAGAAACAGATTTCCGGGCAAATAAAAGAGGAGGTACACACTTGTTTTAAATTGCAGCAATGGTTTTATAGGACTTGGCCTCCAATGCACCGTTAAAAGGCTCTTTTTCCGTGATTGATTTATAATTAACTAATTTTTGTGTTCTGCATGATCTCAATCTCCTTTTCTATATTCAAGGTTACTGGTGCACGATTGAAACTCCAGGATATTGGTTCCGAAATGCAAAAGATCAAACAAGTGGCTCATGGCCTGGTAAGTTTATTTTGTAATATTTTGATCCGTATATTGGATGCTGGTTTTCTAGTGTGTGGTCTTCTATTGTGTTAACATAAATTTTGATGTTGGTTCTTCAGGGTGGAAAGTTGGATTCAATTGAAGCAAAACAGGTAACCTCCTTCACCTAATTTTCTTCCATCTGTCCACCTTTTTAGATTGTTTCATTTTACTGTCAAGAGTCTGTTTTGCTATCTTCAGAGCAACTTTTGGCATAATTTCTGTTTTCTTGAATTGAGCATACCCAAATTTAGTAACTATTATTCCTAGAATCACACATTCTTGACACCATTAACAGTTTATATGCTGAAACAAACCAAATGATCTTAAAGAATACCAAGATTTTAATGTGGTATTTTTGGGATTTTAAGCCCTACAATATATATAAGCATATTCTCAGTTTATCAGCATGTGAATGACATATAATATCCTTTATTTTCATTCCAAAAAACGAAACTTGTTCTTCGAGAAACAAAAACCGAAAAGTGTCTTGTGTCATGTGGATATATGCCCCTGTGCCCCAAATACTTGACTTGATATTACTAGTTAAATGTTTCTATTGGCATATTGCTTGTTCTATCTACTTTAGGATTACATTATCTCCCCCTTTTAATGATTTCAATTTCAAATAAATATGATTGACACTGATGGTATTCTATCTGCAGAACTATTCATTGGCCGGTGTGATGTACCTCGTCGAATTCATAGAGCAAAACGGTGGGAGGTTGCCTCGTAGCGTGGTAAGTCTTAAGCACACCATACAACAATCCACGCATTACGCATTACGGATTAAAAACCTGTAGCTGTTCATACGACAAATTCATGTACCTAAGGATTTTATTTCCTTTTTTGTACCATATGTATGTATCGGTGTAACGTACGCTTGTGTTCAACTGGTGATGCAGGAACACTTGCAACGAACTGCCAGGCTCTCTGGAATTACTGGAGACCAAAAGCAGCTGCAGGTCAGTGATGCTCTCTCTCACTCTCGCCTTGACATTTTCATGGCAGCAGCGTTGCATTCCACTACACTACTAGCTACTCATTGCTAAATTTTTACTACATAAAAATGATTTTCAGAATTGTGCGAGACTGACTTGGAGGCTTTTGTTTTGTCAATTTTTCAGGGGCTCGGTCAGTTGCTGGCGATCGAGTCGGCGACTCCTGTAGGAAGTGGACTTCACTGTACCTCGGCACGGTTATTCAAGGCAGTGGTATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002909