BGIOSGA002934

From RiceWiki
Revision as of 10:44, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002934| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002934, complete gene.| tag = OsI_007...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA002934

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002934, complete gene.

LocusTag

OsI_00739

Ensembl Transcript ID

BGIOSGA002934-TA

Ensembl Protein ID

BGIOSGA002934-PA

Length

2371

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:5369207..5371577

Sequence Coding Region

5369207..5369291,5369691..5369766,5370655..5370754,5371428..5371577

Genome Context

<gbrowseImage1> name=IndicaChromosome01:5369207..5371577 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:5369207..5371577 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCAGGTGAACGATGGTGATGATGTTCAATCGCTGTACCGGCCTGTGCATGCATGCGAATCATTGAAGGCGAAAGAACCCATCGGGTGGTTTGGTTTGACGAAGTTTGTGGAACTAGCAGCTTCAATGCATGAAGAATTGGTTTTTCAGAACTTGGACAGAAAAAGAAAAGGTATATGTGGGCCTCAACGCGCAGGCACATTGAATAGTGGGCCAAAGATAATTGGACCGAAAGGCCCATGGGCTTCCCTTAGGCAAAAGCCGTCGCCGATTTTCCTCGCCGGAAACGAACCAAAACTGGAGCAGAAGCCCACAGAATGTCACTCAAAACTGCCCAGAATACAGGAGATGAAGTCACCAAAAGCAGGTTTTATCATAGTCTCATCTGATGAGACTGACATAACTGCGTAA</cdnaseq>

Protein Sequence

<aaseq>MQVNDGDDVQSLYRPVHACESLKAKEPIGWFGLTKFVELAASMHEELVFQNLDRKRKGICGPQRAGTLNSGPKIIGPKGPWASLRQKPSPIFLAGNEPKLEQKPTECHSKLPRIQEMKSPKAGFIIVSSDETDITA</aaseq>

Gene Sequence

<dnaseqindica>1..85#485..560#1449..1548#2222..2371#ATGCAGGTGAACGATGGTGATGATGTTCAATCGCTGTACCGGCCTGTGCATGCATGCGAATCATTGAAGGCGAAAGAACCCATCGGTAAGTAGATTGCCTGTCCATTCTTGACGACCAGTAGTAAATAGCAGCCGTGCGATCCTGCAAATAATTCAAGCAAGAGCACTGGTGAGTTGCAGAGATCGGAACAGGAGGCGCCCACGCGGCTCTCGTCAGAGGAAGAATCTGGAGGAGAGGAGACATAGCGCTAATTAGGAGTCCAGTAGCAGTGATGGTACTGCGAGATTAGGGTTCTAATTAGGGTCTGGTTAGGCCATTGTTGCAGCAAGTTAAGGTACTAGTTTGTAGTTTGCAGAGATAGTAGCTTGAATGCATGAAGGATTGGGTTTTTCAGAACTTGAAACTGTGCAGACAAGTTAGAAAACGTGTGAGATGTTTGGAACTGAATATGGCCCGAGAGATTTTTGTCTGAAATTCTTCTAGGGTGGTTTGGTTTGACGAAGTTTGTGGAACTAGCAGCTTCAATGCATGAAGAATTGGTTTTTCAGAACTTGGACAGGTTTGAAAAATCATGTGAGATGTTTGGAGCTTGAATACGGCCTAACATTATTTGTCCGAAATCCTTCCAAAGTGTCTGAAAATTTTTCCAAGATACAGCCTAGGTTGTACGTAGATTCTTCCTATGTGTGGATGGTTGCGACCTTCAAATTATCAACAGCAGCGGCGTGTAGCGTACTATTGGTTGCAAGCTACCGGGCGTTGCAACAGTCTTAACCTATGATTGATTGGCACATGGAAGAACAATCTTGGGATCTCATATCTGAGTATATATATATTACTGCAAATTAGTTAACCCATTACTAATCCATGGCTAGAATTGGGCTATATGTTCTTCTCGGACTCTCCCGACAAACCGATTCAGGCTCCGCGTTGAAATGATTAGACACAACCAGCTTAGCTAGCTCCTAATTTTAGTATTTAAAATGAAGATGAATTCTGCATGCGGCTACCTTTGCTGCTTAATCATTTGATAGGCTGTTTGTCAATCTGTTCTGCACTTCTGCCTCTTCTTTTTCTGGCAGCTCCATTATTTGCATGTTGTCTTATCAACCGCATTCAGAATTTAAATTTTAGAATTTAATTTTAAGTTGATTTTTTGGTTTTTTTTCATCGTAGTTTGTTTTATAATATTGGCTTTTCAATTGGTAAAAAACACCGATATGAAAGTTTTATTTATAAATTATTTATATTACTACTAGTAATATATTTTTTTTCTATGGCTTATCAACTATAGAGCAAACTATATTCTTTGTGGGGGAGAAAATAAGAAGCAGCCAAGACTGGTTGTTGATTAGCAAGGGCCGAACGTAAGGGCACAAAAAGATTAAGCCCATGAATGCAAGATGAGCTAATATTGTCGGGTTAAATATATTTGGGCCTTTTCTAGAAAAAGAAAAGGTATATGTGGGCCTCAACGCGCAGGCACATTGAATAGTGGGCCAAAGATAATTGGACCGAAAGGCCCATGGGCTTCCCTTAGGCAAAAGGTAATTGGAGCTGACGATTGCCTTGATTGTCCTTTAGCCATATTTATGTGGTTTTACTTTTATATAAGTTAACCACCTCCAAAAAATTTTCTAGATAGAAAACATCAATTTTAACCGTCAACAGATATCTACATCACAAGTATCACAAAATACTATTACATCATAGGGGTAGAATGTACGTGTGTGTTTACGTAGATAAGTGTGTGGATGTTATGAGCGTATGTGTTTCTAACTTGTTTCTTAAAAAAAAAAAGAAGAAGAAAAAAGCTTGCATCATGGGTGCATGTTGGTGAGCCAACAGCCAAGTAGCACAACTGCACAAGATTCCCCTTTTAGATGGCCAAATGACAAACATCAACAGGTTGAATGAAGTTCAGTGGATATGATTTCATTTTCGTCTCAACCTTCAACCAAAGTTATATTGTCCATACATCCATGAGCCGTCTGTTGCAGCGTCGAAAAGGCATAAAAATCGGAGCATCATATCGCTGAAATGAAAGAAAATGACTGGAAGTCGCATCCAGTGGTCAATCTCCACACAACCATTGCCAAATATGTTATGTTCCTTGAAGAAAACAAATAATATGCATGTTTAAGCAGGTTAAGAAAGTCATCTATGTAAGGTAATGTATATATTATACTCCTATATAATTTGACTTGCATGAATGAACAGCCGTCGCCGATTTTCCTCGCCGGAAACGAACCAAAACTGGAGCAGAAGCCCACAGAATGTCACTCAAAACTGCCCAGAATACAGGAGATGAAGTCACCAAAAGCAGGTTTTATCATAGTCTCATCTGATGAGACTGACATAACTGCGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002934