BGIOSGA002943

From RiceWiki
Revision as of 10:44, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002943| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002943, complete gene.| tag = P0498B0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA002943

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002943, complete gene.

LocusTag

P0498B01.36

Ensembl Transcript ID

BGIOSGA002943-TA

Ensembl Protein ID

BGIOSGA002943-PA

Length

1709

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:5598865..5600573

Sequence Coding Region

5598865..5598953,5599101..5599170,5599273..5599959,5600097..5600573

Genome Context

<gbrowseImage1> name=IndicaChromosome01:5598865..5600573 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:5598865..5600573 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGATTGCAGCAGCTGGATCCATGGCTACGCCAACGCTAACGCCACCGCCGGCAACAACGGCTTCATGTGCGGCTACGCTGCCAGCTGCAGCCCAGTAGAGTTTCAGCAGCAGCAACAGCTGGTCGGCTCGCAGATTGAGCACCACCTCAACCAGATCAGCATGCAGATGGGGATGGATGACGAGTCGGCGGTGTACGACGGCGCCTCCATGGTGGACGACCTCCTCATGGCTTCCTCGTCGCCGCACCACCACGCCGGCGCCGGCAGCTTCCAGTACTCCTCGCCGACGTCCTCCTCCGCCTCCTTCCGCTCCGCCTCCGTCTCGTGCAGCCCTGAGAGCTCGGCGGCGGCGACGACGCACTTCCTCGGACCGCCGGCGCCGTCCGCGGCGGCGGCGGGGTTCCATTACCCGGAGGTCTCCTCGCAGGCGCCGTTGCCACTACCCTTGCCGCCCTACGAGCCGCAGCACGGCCAATACACCACCGTCCTCTCGCCGCCGCCGCCGGCGCCAGAGTTGCCGGCGACTACTACGCCGGCGACCGGCGGCGCGTTCAGGCGGTACGCGCGGCACCTCCGCCCGAGGAGACTGCCCAAGCCGGGAGGGTGCGGGCAGAGGATGTTCAAGACGGCCATGTCGGTGCTCACCAAGATGCACGTGGCGGCGACGTACAACCGCCAGTACTACTACCAGCAGGCGGCGGCCGCCGCCGCGTCGGCGTCGGCGGCCGAGGCGCCGCCGTCCGGCAACCAGCTGCAGCACATGATCTCGGAGCGGAAGCGGCGGGAGAAGCTCAACGACAGCTTCCTCGCCCTCAAGGCCGTCCTCCCTCCCGGCTCTAAGAAAGACAAGACATCGATACTGATCAGAGCAAGAGAGTACGTAAAATCTCTCGAGTCAAAGCTGTCAGAGCTGGAGGAGAAGAACCGGGAGCTAGAGGCGAGGCTAGCCAGCCGCCCCGCCGCCGCCGCCGCCAAGAACGACAAAGGCGAGACGGCGGCGGCGCCAGCGCCGGAAGCCGGCGATGAGACGAAGCGAAAGGACCTAGTAGAGATCGAGGTGACGACGAGCGGCGGCGGCGCCGGAGCGGCGGATGCGGCGGCGGCGGCGGGAGGAGATCAAGAGACCTGCACGCTCAACGTAGACTTGCGCGGCGGCGGAGGCGGCGGAGGCATGAGCACGACGGACGTGGTGCTGCGGACGCTGCAGTGCCTGAGAGAGCAGATCGGCGACGGCGCCAGCCTCGTGGCGATGAGCACCAGCGCCGGCTCCGGCGGCCGCCCGCCTCGTGCAAACCTAACATTACAGCTCAAGGTGTAA</cdnaseq>

Protein Sequence

<aaseq>MEDCSSWIHGYANANATAGNNGFMCGYAASCSPVEFQQQQQLVGSQIEHHLNQISMQMGMDDESAVYDGASMVDDLLMASSSPHHHAGAGSFQYSSPTSSSASFRSASVSCSPESSAAATTHFLGPPAPSAAAAGFHYPEVSSQAPLPLPLPPYEPQHGQYTTVLSPPPPAPELPATTTPATGGAFRRYARHLRPRRLPKPGGCGQRMFKTAMSVLTKMHVAATYNRQYYYQQAAAAAASASAAEAPPSGNQLQHMISERKRREKLNDSFLALKAVLPPGSKKDKTSILIRAREYVKSLESKLSELEEKNRELEARLASRPAAAAAKNDKGETAAAPAPEAGDETKRKDLVEIEVTTSGGGAGAADAAAAAGGDQETCTLNVDLRGGGGGGGMSTTDVVLRTLQCLREQIGDGASLVAMSTSAGSGGRPPRANLTLQLKV</aaseq>

Gene Sequence

<dnaseqindica>1..89#237..306#409..1095#1233..1709#ATGGAGGATTGCAGCAGCTGGATCCATGGCTACGCCAACGCTAACGCCACCGCCGGCAACAACGGCTTCATGTGCGGCTACGCTGCCAGGTAGGTGTTCAAACATCTTGATGATCACCGTGACACGATCGATCGATTGATCGCGACGACGACGATAATACCATCTGTAAATTAGTCGTCTCTGTTCTTGAGTGGTTTGGCTGATCAGTTAGTTAATTAGCTACTTCGTGTTTGCAGCTGCAGCCCAGTAGAGTTTCAGCAGCAGCAACAGCTGGTCGGCTCGCAGATTGAGCACCACCTCAACCAGGCAAGCTTGATTTGCAATTTATTCGATCAAGAAACAATGCATAAAATCAAAGAAATTTTAGGATTTAATTTGGTAGGTGTCGCGTTTTATTACGGCATGCAGATCAGCATGCAGATGGGGATGGATGACGAGTCGGCGGTGTACGACGGCGCCTCCATGGTGGACGACCTCCTCATGGCTTCCTCGTCGCCGCACCACCACGCCGGCGCCGGCAGCTTCCAGTACTCCTCGCCGACGTCCTCCTCCGCCTCCTTCCGCTCCGCCTCCGTCTCGTGCAGCCCTGAGAGCTCGGCGGCGGCGACGACGCACTTCCTCGGACCGCCGGCGCCGTCCGCGGCGGCGGCGGGGTTCCATTACCCGGAGGTCTCCTCGCAGGCGCCGTTGCCACTACCCTTGCCGCCCTACGAGCCGCAGCACGGCCAATACACCACCGTCCTCTCGCCGCCGCCGCCGGCGCCAGAGTTGCCGGCGACTACTACGCCGGCGACCGGCGGCGCGTTCAGGCGGTACGCGCGGCACCTCCGCCCGAGGAGACTGCCCAAGCCGGGAGGGTGCGGGCAGAGGATGTTCAAGACGGCCATGTCGGTGCTCACCAAGATGCACGTGGCGGCGACGTACAACCGCCAGTACTACTACCAGCAGGCGGCGGCCGCCGCCGCGTCGGCGTCGGCGGCCGAGGCGCCGCCGTCCGGCAACCAGCTGCAGCACATGATCTCGGAGCGGAAGCGGCGGGAGAAGCTCAACGACAGCTTCCTCGCCCTCAAGGCCGTCCTCCCTCCCGGCTCTAAGGTATACATACATACACGTATCAATACGTACATTTGTACGTATACACATGCATGATCATTCATGGACATTTTGTTCTTTTGATTAGTGATCTTGACTAGTAATATTTGCTTCAATCATTTCTTCCTTTTTAATGGTAGAAAGACAAGACATCGATACTGATCAGAGCAAGAGAGTACGTAAAATCTCTCGAGTCAAAGCTGTCAGAGCTGGAGGAGAAGAACCGGGAGCTAGAGGCGAGGCTAGCCAGCCGCCCCGCCGCCGCCGCCGCCAAGAACGACAAAGGCGAGACGGCGGCGGCGCCAGCGCCGGAAGCCGGCGATGAGACGAAGCGAAAGGACCTAGTAGAGATCGAGGTGACGACGAGCGGCGGCGGCGCCGGAGCGGCGGATGCGGCGGCGGCGGCGGGAGGAGATCAAGAGACCTGCACGCTCAACGTAGACTTGCGCGGCGGCGGAGGCGGCGGAGGCATGAGCACGACGGACGTGGTGCTGCGGACGCTGCAGTGCCTGAGAGAGCAGATCGGCGACGGCGCCAGCCTCGTGGCGATGAGCACCAGCGCCGGCTCCGGCGGCCGCCCGCCTCGTGCAAACCTAACATTACAGCTCAAGGTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002943