BGIOSGA002984

From RiceWiki
Revision as of 10:44, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002984| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002984, complete gene.| tag = P0031E0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA002984

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002984, complete gene.

LocusTag

P0031E09.17

Ensembl Transcript ID

BGIOSGA002984-TA

Ensembl Protein ID

BGIOSGA002984-PA

Length

4176

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:6468464..6472639

Sequence Coding Region

6468464..6468625,6469035..6469112,6469219..6469381,6469794..6470098,6470207..6470271
,6470880..6471073,6471543..6471751,6472457..6472639

Genome Context

<gbrowseImage1> name=IndicaChromosome01:6468464..6472639 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:6468464..6472639 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCGCCTCCGTCCGCTCCCTCCTCCTCCGCCGCCGCGGCCGCGCGTGCCGCTCCCCATCGCCCGCGCTTGCGGTCGCGGCGATCTCTCCGGCCGCCGCCGCAGCCGCAGCCGCGGGTGCTTCCCTCTTCCGTCGCCTGCCGATCCTCCGCTCTCCGGGACTTCCAATTCAGAAATATCTCCACGAGACCCACAAGCAGGCGCGATGTCCTTCCAGTTGCCTCTGCATTTGATGAGGATCTGGGTGATTTCTCGCTGGTGCACGCTGATGGGGATGACCCTTTAGAGGTTGTTGTATATTCAAGTGAGAGCGACTGGAGCGATGAGGAGGTCGTGTTAAATCCAACGAGTGATGTTGAGTTACCTCTAAAGAGCAAGAGCCGCTTTGAGGGTGTAGAGGTTCTATCAGCATTAGCTGGATTTCTTTTTGCACCAGTTGCTGATAACATGAAGATTCATCATTTCCGGAGGAGAGGGAAGCTTATGTCTCCATTCTATAGAAAGCCAACACCAGCGATGGGAGGATTGTTCTTTGTACCTATTGGCATTTTTGTTGCAAGAAGACAGGTTGGTTCCTCAACTGGAGTGAATGGAGCAGCTATTATAACCCTCATATTTGCAATGGTTGGATTTCTTGATGATATTTCAAATCTTGTCATGGACTGCAATCGTAAAATACCGCATTGGATGAGATTATTTGTTCAGATTGTTGCTGGGATTTACTTATCTATCTGGTTAAGTTCTACAAATATTTCAACACCATATAACACGAAATTCCTTGTTCCTCTTCCTCCTCCTCTTGGCCTTGCATTCATAGGAAAAATCTATCTCGTTTTGGCTGCAATATGTTCTCTTTCCATGGGCACTGGAGTTACATTGGTTGATCATCTTGATGGCTTGGCTGGTGGCGTCGCTGCTTTAGCACTTGCTGGATTGTCTGTTGCTTCCCTCCCAATTTGTTCAGAAATGAGTGTTTTTGGAGCATCAATGTCAGGCGCTTGCACTGGCTTTCTTTTCCATAACAGATATAGGGCCTCAATTGTTATGGGACGTGTTGGCTCTTTTGCACTGGGAGGAGCAATTGCTACAATTGCAGCCTGCAGTGGAATGTTCATTCCGATGTTCATCGCATGCAGCATTTTTCTTCTTGAGCTGCTCTTGGTAATATTTCAGGTCCCTTTTCAGATGGCTAAGAAGCACTTCCTTGGGACAAATAGATATCCCTTGCGTATTCTTCCCTCGTATTACTTTCTTAAGTCGTGGGGTATCAAGGAACCTTATATTGTGGCTGGCGCATACATTATATCATGCCTATTGACGGCATTTGCAGGATATCTTGGTCTTGTTTCAGCGTAA</cdnaseq>

Protein Sequence

<aaseq>MASPPSAPSSSAAAAARAAPHRPRLRSRRSLRPPPQPQPRVLPSSVACRSSALRDFQFRNISTRPTSRRDVLPVASAFDEDLGDFSLVHADGDDPLEVVVYSSESDWSDEEVVLNPTSDVELPLKSKSRFEGVEVLSALAGFLFAPVADNMKIHHFRRRGKLMSPFYRKPTPAMGGLFFVPIGIFVARRQVGSSTGVNGAAIITLIFAMVGFLDDISNLVMDCNRKIPHWMRLFVQIVAGIYLSIWLSSTNISTPYNTKFLVPLPPPLGLAFIGKIYLVLAAICSLSMGTGVTLVDHLDGLAGGVAALALAGLSVASLPICSEMSVFGASMSGACTGFLFHNRYRASIVMGRVGSFALGGAIATIAACSGMFIPMFIACSIFLLELLLVIFQVPFQMAKKHFLGTNRYPLRILPSYYFLKSWGIKEPYIVAGAYIISCLLTAFAGYLGLVSA</aaseq>

Gene Sequence

<dnaseqindica>1..162#572..649#756..918#1331..1635#1744..1808#2417..2610#3080..3288#3994..4176#ATGGCGTCGCCTCCGTCCGCTCCCTCCTCCTCCGCCGCCGCGGCCGCGCGTGCCGCTCCCCATCGCCCGCGCTTGCGGTCGCGGCGATCTCTCCGGCCGCCGCCGCAGCCGCAGCCGCGGGTGCTTCCCTCTTCCGTCGCCTGCCGATCCTCCGCTCTCCGGGTGAGTTCCCAGATCTCGCGGGCGCCTTCGTTCCTTCTCCTCCTGCTAGGGTTCCGCATCGGGGGAATAGCCGCCTCGCTGATGTTCATCGAGGCTTTAGCACGTGTACTATTGGCACGAAATGAGTGTTCTCTTCTAGTTTTTCCCCGTCTGATTATCCATGTGTTGGCGAGTTGGGATGCTGCTTGTGTGATTCGTTTCGATGCTATTTGATCTCGTCGAGACGGTTAGGATGTTGCCTGTTGGAGAAATCATCCACAGTATCACCTTGGATTTCTGAGTGGTGACTTTATGATGGATGTTTGTATATAACTAATTGAGTTTGCGCGAGAATGATTCGTTTGACAAACCAATGCGTGTGAAATGGTTAAGCTAAGGCAATCGCATTGTCATTTAATTATCCTTTCAGGACTTCCAATTCAGAAATATCTCCACGAGACCCACAAGCAGGCGCGATGTCCTTCCAGTTGCCTCTGCATTTGATGAGGTACTGTTTTATTTTTCTTTAGATAACATTGATTCTTATGGAGTTTCTTGATACATTGATTCTTATGGAGTAGCTTAATTTACTATTAGCGTTGGTTTTTATGTAGGATCTGGGTGATTTCTCGCTGGTGCACGCTGATGGGGATGACCCTTTAGAGGTTGTTGTATATTCAAGTGAGAGCGACTGGAGCGATGAGGAGGTCGTGTTAAATCCAACGAGTGATGTTGAGTTACCTCTAAAGAGCAAGAGCCGCTTTGAGGGTGTAGAGGGTGCGATGACAGTTGCTGCCCATAGGTTTGCCACGATTGAGAAAGGGCATAGGGACAGCAGGCAAGATAATAATATCTTCTGATAATACTTAAAAACTAGAGATTCAGCGTGTAGATTTGTAGCATGCATTATGATCTTCCAGGATTATCTGTTTATGTTATTCCTGGTAAATGGCACTTAAAAGTTATCAAACTAGTAGTAAGAAACACACGCTTTTTACAAGTGTTTTTGCTAGGTTCTGACTGAAGCTCTTTACATCAATTCCCAGAACTCAACAAGGGCTGATGAATAATGTTGGACTGATTGCTTTCTTAGCAATATTACTTTTGTTTGTCGACTGGTGTTCTTGGCGGATTGTTAGACTACCTCTGGACTCTTTTTACTTGACACGTCCTTTTTTAATATCATCAGTTCTATCAGCATTAGCTGGATTTCTTTTTGCACCAGTTGCTGATAACATGAAGATTCATCATTTCCGGAGGAGAGGGAAGCTTATGTCTCCATTCTATAGAAAGCCAACACCAGCGATGGGAGGATTGTTCTTTGTACCTATTGGCATTTTTGTTGCAAGAAGACAGGTTGGTTCCTCAACTGGAGTGAATGGAGCAGCTATTATAACCCTCATATTTGCAATGGTTGGATTTCTTGATGATATTTCAAATCTTGTCATGGACTGCAATCGTAAAATACCGCATTGGATGAGATTATTTGTTCAGGTGAATGGTGCTTTTTCAAGAGAGATGATAGGATGCTCTTCCCTTATTTTTTTGACGGGAGATGCTCTTCCCTTATTATGTTGAAAGCAACTTACAGTTCTTTTGCAGATTGTTGCTGGGATTTACTTATCTATCTGGTTAAGTTCTACAAATATTTCAACACCATATAACACGTAAGCATTACTTCAACTTATATATACTGAAAAACTAACTGCAGTTTGAATTAATGCTTTATCGGTTAGGCAATGTGGTAAATTGCCTTTTTTTTTTTGATGAGGAGTAACCTTTCTTAATGGCCTATATCAAAGTATTATCATGATGCAGTACAATGTACAATTCAGTTAATAAGGTGCACAACATTATTTCTGCCTCCCTGTACTCACAGGAACACTGCACAGATACTTCGTGCCTTACATTACTTCCAAATGTACTGATTTAACATCTATTTTCAACTCATGCTAGTAGCTAGTCACTAGTGATCGTGTTCACATGTTAATTTAGAGGCAAGGGTGCTTTGCTAACCACTTCTGATTTTCATTTCCTATTTAGTGCACCAAGCTAGTCATGTGGCCTTAAATTCCATAACCAGCATTGATGTGGCCTTAAATTCCATAACCAACATTGATGTGGTCTTAAACTCCATAACCAGCATTCTGTAACAAAAAGATACATGTCACTACCGTTGTCATAGTTCTATAGCTTTGCCATTTTGACTAATACTTTAGGATGTTTTTGACTTTTTTCACTTGTCAGCTTTACTAATTCGAATTTGTTCATGAAGGAAATTCCTTGTTCCTCTTCCTCCTCCTCTTGGCCTTGCATTCATAGGAAAAATCTATCTCGTTTTGGCTGCAATATGTTCTCTTTCCATGGGCACTGGAGTTACATTGGTTGATCATCTTGATGGCTTGGCTGGTGGCGTCGCTGCTTTAGCACTTGCTGGATTGTCTGTTGCTTCCCTCCCAATTTGTTCAGGTAATTTGCCATTCTGGCTTGTTGAGCTAATCTCAAATATACTTATCCTAAACCATGAATAATCCCTTATTCGGCTATAGCATATTGGCTTTTACTGTTGCTTGGATACAAACATCCCTAAGTGGAAAAATGCCAGTGATGCACTTCACTCATTCAGTTTCATCTGGATCTTTCAAAGCTTATGTGTTCCACTGGCTGAAAAAGCCAGATGCAGTCTCCTTGCAGACATGCATATCATTTGTAGGGAGAAAGAGAACAAGTTGTGTAGTCACTAGTCATGAATCTGAAGTTGGCATATCAGAATTTACCTTGTCCCTATTGTACTTCAAAGTGATCTTCCAGATGGGCGCTCCTGTTGACCGTCTAATTGATTTTCGACTGCTACTAGTGCATTATTAGTTGTAGGTTTAATATCTGTAGTGATTCTACTGAAGTAATGGCTAATAAGCTATTCACCTTTTTACTGCAGAAATGAGTGTTTTTGGAGCATCAATGTCAGGCGCTTGCACTGGCTTTCTTTTCCATAACAGATATAGGGCCTCAATTGTTATGGGACGTGTTGGCTCTTTTGCACTGGGAGGAGCAATTGCTACAATTGCAGCCTGCAGTGGAATGTTCATTCCGATGTTCATCGCATGCAGCATTTTTCTTCTTGAGCTGCTCTTGGTAATATTTCAGGTAAGTTATTGCTTGGATTACTTCCTCTTTTATTTTTTTTTTGGAGACAATCACTTCCTTTTGCTTCAATTATTTTTTATATCTGGTGGTTGTTACACTTAGTCAGCATTTCTATAACTGTTACAAAGTGTAGCTTCTGCTTTGAGCTGCATGAACCGATTTAGATGTTTTCCAGTAGATAATGGTTGAGTATTGTTGGAGTTCATTATTTGATTGTTCTCATTCTCTGTCAAAGAGCATGGACGATCTTACTTTGGTTATAGCTTTACACCCTTTTATATAAAAATAGATGGGTTAATATATCTGACCATCAAGTGATCTTTGTTGTAAACCACTATTTTTTGTTATCGTTTCCATCTTTCTGGGCCCCGCAGCCCAAACCTTATGTGCTTAATCAGGACCCCCTAGAAGGCCCTTTTACTGTCCATGAGCAATTATATTCGTATGGAAGTAAATTTAGCTGAGTTATGCTTCCATAATCCACGTTGTGAAGTTTGCTTATCCTTTTCTTCTGAAAAGTAAGTTTCGCTGGTACATTAATCGTATCATGCCTTGTGTATATGTTTTTGCTGAACAGTTTTTAGTTAAATCTTGGTCTAGTCAGATTCAAATATGACAATCCTTTGAAGTAGAGCGCATTTGATCATAGAATTACTTTTTGGTGATGAACAAAGCCTGTCTTATTTATACGATTATCTCTCACAGGTCCCTTTTCAGATGGCTAAGAAGCACTTCCTTGGGACAAATAGATATCCCTTGCGTATTCTTCCCTCGTATTACTTTCTTAAGTCGTGGGGTATCAAGGAACCTTATATTGTGGCTGGCGCATACATTATATCATGCCTATTGACGGCATTTGCAGGATATCTTGGTCTTGTTTCAGCGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002984