BGIOSGA002990

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Revision as of 10:44, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002990| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002990, complete gene.| tag = P0515G0...")
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Gene Name

BGIOSGA002990

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002990, complete gene.

LocusTag

P0515G01.6

Ensembl Transcript ID

BGIOSGA002990-TA

Ensembl Protein ID

BGIOSGA002990-PA

Length

2628

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:6693933..6696560

Sequence Coding Region

6693933..6693982,6694205..6695279,6695825..6695986,6696070..6696127,6696251..6696373
,6696490..6696560

Genome Context

<gbrowseImage1> name=IndicaChromosome01:6693933..6696560 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:6693933..6696560 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAACAGAAGTTTTTACCATCAATGGAAAGAGCACAGGGAAAAAGGATGGGAGCTCCGCCGCCGGCTCACCGCCGAGCTCGCGCAGGTGCGCGCCACTTGCAAGCGCCTCAGCTCCCTCCCGGCCCCCGCGCCTTCCTCCGCGCTCTCCGCCACCGACCCTTCCACCCCGCTGCCCCCGCACCCGCCGGTCTCCAAGCACAAGTCGAAGAAGGGGAACCCCTCCTCCAACCCGGGCCTCTCCGCGGAGGCGCGGCGGAAGCTCTACGCGCCCGTGTTCAAGAGCTGCGGCGCGCTGCTCGCTAGGCTGATGAAGCACAAGCACAGCTGGGTGTTCAACACGCCCGTCGACGCCAGCGCGCTTGGCCTCCACGACTACCACACCATCATCACCAAGCCCATGGACCTCGGCACTGTCAAATCGCGGCTGGCCGCCGGGCACTACAAGTCGCCGCGGGAGTTCGCCGGTGACGTGCGCCTTACCTTTCAGAATGCCATGAGGTACAACCCCAAAGGGCAGGATGTGCACTTCATGGCGGAGCAGCTGTTGAACATGTTTGAGGAGAAGTGGCCAGAAATTGAGGCCGAGGTAGCACAGCTGTCACCACAGCCGCCAACGCCATCATCGGCTGCACCCAGGAAGCCGAAGGAGATAGATAATTCTAAGGTGTTAGAGAGGTCGGACTCAACAGTACATGCTGCGGGGATGGAGGCCACTCCAAAGCAGAACACTGGTCGGCCCCCAGTTTTAAAGAAGCCCAAGGCAAGGGAGCCTAATAAGAGGGAGATGACCTTCTGGGAGAAGCAGCGGCTTAGTAATAATCTCCAGGAGTTGCCACCAGAGAAACTTGACAATGTTGTGCAGATTATAAAGAAGAGAAACTTGTCACTCAGCCAGCATGATGATGAGATTGAGGTTGATATAGATAGCTTTGATGTTGAGACATTATGGGAGCTCGATAGGTTTGTTACAAACTACAAAAAAAGTATAAGCAAGAACAAGCGGAAGGCTGAGAATCCCGTGGCAGGGCAGGATGAGATGAATCATGATATAGAGCTAGAGAAGACAGAGCATGCAAGGTTGGATGAAGTAGAGCAGGATCAGATGCCTCCAGTACAAGAGACGGTTGTTACAAACTACAAAAAAAGTATAAGCAAGAACAAGCGGAAGGCTGAGAATCCCGTGGCAGGGCAGGATGAGATGAATCATGATATAGAGCTAGAGAAGACAGAGCATGCAAGGTTGGATGAAGTAGAGCAGGATCAGATGCCTCCAGTACAAGAGACGTTACATAATCCTGAGCCAGAATCAATTGATATCGAACCACCTAAAGAAAACACAACAGATGATAATGAGAGGTATGTAGGCTCATCATCACCTGTTCATTTGGAAGATCAGAAGGGGGAGAATGCGGGTAGATCAAGTAGTTCTGGAAGTTCTAGTAGCGATTCAGGCTCTTCGTCTAGTGCATATGCAGATACAGACACAGATAGTTCATCAGCAGATGGCTCTGATGCTGCACAGTCACCCAGAACGTAA</cdnaseq>

Protein Sequence

<aaseq>MNRSFYHQWKEHREKGWELRRRLTAELAQVRATCKRLSSLPAPAPSSALSATDPSTPLPPHPPVSKHKSKKGNPSSNPGLSAEARRKLYAPVFKSCGALLARLMKHKHSWVFNTPVDASALGLHDYHTIITKPMDLGTVKSRLAAGHYKSPREFAGDVRLTFQNAMRYNPKGQDVHFMAEQLLNMFEEKWPEIEAEVAQLSPQPPTPSSAAPRKPKEIDNSKVLERSDSTVHAAGMEATPKQNTGRPPVLKKPKAREPNKREMTFWEKQRLSNNLQELPPEKLDNVVQIIKKRNLSLSQHDDEIEVDIDSFDVETLWELDRFVTNYKKSISKNKRKAENPVAGQDEMNHDIELEKTEHARLDEVEQDQMPPVQETVVTNYKKSISKNKRKAENPVAGQDEMNHDIELEKTEHARLDEVEQDQMPPVQETLHNPEPESIDIEPPKENTTDDNERYVGSSSPVHLEDQKGENAGRSSSSGSSSSDSGSSSSAYADTDTDSSSADGSDAAQSPRT</aaseq>

Gene Sequence

<dnaseqindica>1..50#273..1347#1893..2054#2138..2195#2319..2441#2558..2628#ATGAACAGAAGTTTTTACCATCAATGGAAAGAGCACAGGGAAAAAGGATGGTAAAGAAGACGTTTCAGACAAGGAAAAGGCAAAAAAAAAAAAAAAAAACGAACAGTAGCAGCTGCCTGCCCTGCCCCACCACCTCCCACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCGGCGGCTTTCGATGCTCACAACGGGACGCACGTCCGCACCGTCACCTTCTCGCTGTCGTCCTCGCCGGCCGCCCGCAGGGAGCTCCGCCGCCGGCTCACCGCCGAGCTCGCGCAGGTGCGCGCCACTTGCAAGCGCCTCAGCTCCCTCCCGGCCCCCGCGCCTTCCTCCGCGCTCTCCGCCACCGACCCTTCCACCCCGCTGCCCCCGCACCCGCCGGTCTCCAAGCACAAGTCGAAGAAGGGGAACCCCTCCTCCAACCCGGGCCTCTCCGCGGAGGCGCGGCGGAAGCTCTACGCGCCCGTGTTCAAGAGCTGCGGCGCGCTGCTCGCTAGGCTGATGAAGCACAAGCACAGCTGGGTGTTCAACACGCCCGTCGACGCCAGCGCGCTTGGCCTCCACGACTACCACACCATCATCACCAAGCCCATGGACCTCGGCACTGTCAAATCGCGGCTGGCCGCCGGGCACTACAAGTCGCCGCGGGAGTTCGCCGGTGACGTGCGCCTTACCTTTCAGAATGCCATGAGGTACAACCCCAAAGGGCAGGATGTGCACTTCATGGCGGAGCAGCTGTTGAACATGTTTGAGGAGAAGTGGCCAGAAATTGAGGCCGAGGTAGCACAGCTGTCACCACAGCCGCCAACGCCATCATCGGCTGCACCCAGGAAGCCGAAGGAGATAGATAATTCTAAGGTGTTAGAGAGGTCGGACTCAACAGTACATGCTGCGGGGATGGAGGCCACTCCAAAGCAGAACACTGGTCGGCCCCCAGTTTTAAAGAAGCCCAAGGCAAGGGAGCCTAATAAGAGGGAGATGACCTTCTGGGAGAAGCAGCGGCTTAGTAATAATCTCCAGGAGTTGCCACCAGAGAAACTTGACAATGTTGTGCAGATTATAAAGAAGAGAAACTTGTCACTCAGCCAGCATGATGATGAGATTGAGGTTGATATAGATAGCTTTGATGTTGAGACATTATGGGAGCTCGATAGGTTTGTTACAAACTACAAAAAAAGTATAAGCAAGAACAAGCGGAAGGCTGAGAATCCCGTGGCAGGGCAGGATGAGATGAATCATGATATAGAGCTAGAGAAGACAGAGCATGCAAGGTTGGATGAAGTAGAGCAGGATCAGATGCCTCCAGTACAAGAGACGGTATGCTTCTTAGGGATGATGTAATTGTTGTGAATTAATTATACTGTGATATTAACAATATGGTACTTATTATTTCCCTGCAGTTACATAATCCTGAGCCAGAATCAATTGATATCGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGCACAGCTGTCACCACAGCCGACAACGCCGGTCATCGGCTGCACCCAGGAAGCCGAAGTGAGATAGATAATTCTAAGGTGTTAGAGAGGTCGGACTCAACAGTACATGCTGCGGGGATGGAGGCCACTCCAAAGCAGAACACTGGTCGGCCCCCAGTTTTAAAGAAGCCCAAGGCGGGGGAGCCTAAGTAAGAGGGAGATGACCTTCTGGGAGAAGCAGCGGCTTAGTAATAATCTCCAGGAGTTGGCACCAGAGAAACTTGACAATGTTGTGCAGATTATAAAGAAGAGAGAACTTGTCACTCAGCCAGGATGATGCTGAGATTGAGGTTGATATAGATAGCTTTGATGTTGAGACATTATGGGAGCTCGATAGGTTGTTACAAACTACAAAAAAAGTATAAGCAAGAACAAGCGGAAGGCTGAGAATCCCGTGGCAGGGCAGGATGAGATGAATCATGATATAGAGCTAGAGAAGACAGAGCATGCAAGGTTGGATGAAGTAGAGCAGGATCAGATGCCTCCAGTACAAGAGACGGTATGCTTCTTAGGGATGATGTAATTGTTGTGAATTAATTATACTGTGATATTAACAATATGGTACTTATTATTTCCCTGCAGTTACATAATCCTGAGCCAGAATCAATTGATATCGAACCACCTAAAGAAAACACAACAGGTAGGCGACTGTGTTTTTGGAGCATGTTTTATAATTGTTATTATTAATCTAAATGTAAAATTGTGTTTGTGACCTAGCTCTATTACCAGTTTAAGGATAACAGCTAAGTTTGTTCAATTACAGATGATAATGAGAGGTATGTAGGCTCATCATCACCTGTTCATTTGGAAGATCAGAAGGGGGAGAATGCGGGTAGATCAAGTAGTTCTGGAAGTTCTAGTAGCGATTCAGGCTCTTCGTCTAGTGGTAAATGCTCTCATCCTTTGCAGAAATTTATATTAGCAGCATATCTGTTTGCAATTAACTCTATAAAGGATATTTTCATATACATCTGCATAACATATGAAATTTACCGTGAGAAGCATATGCAGATACAGACACAGATAGTTCATCAGCAGATGGCTCTGATGCTGCACAGTCACCCAGAACGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002990