BGIOSGA002996

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Revision as of 10:45, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002996| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002996, complete gene.| tag = P0515G0...")
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Gene Name

BGIOSGA002996

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002996, complete gene.

LocusTag

P0515G01.17

Ensembl Transcript ID

BGIOSGA002996-TA

Ensembl Protein ID

BGIOSGA002996-PA

Length

3828

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:6739637..6743464

Sequence Coding Region

6739637..6739690,6739745..6740785,6743297..6743464

Genome Context

<gbrowseImage1> name=IndicaChromosome01:6739637..6743464 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:6739637..6743464 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTCCGCCGCCGGCGGCGCTTCTCCTCGTCGTGCTCCTGCTCGTCGGCTTCGAAGCCCTGACGACCAAGTCCGGCTACCTCCCCATCCCGACAGCCAACGCCTCGCTCTTCTTCGCCTACTACGAGGCCACGCACCCGCTCACGCCGCCGGCCTCCACGCCGATCATCCTCTGGCTCCAGGGCGGCCCCGGCTGCTCCGGCCTCACCGGCAATTTCTTCGAGCTCGGCCCCTACTTCGTCAACCACGACGCGCTCTCCCTCTCGCCCAACCCATTCGCGTGGAATCGCCGGTTTGGCCTTCTCTTCATCGACAACCCGCTCGGCACCGGCTTCAGCGCCGCGCCGTCCCCCGCCGCCATCCCCACCAACCAGTTTGTCGTCGCCGCGCACCTCTTCACCGCGTTGCAGTCGTTCTTCGCGCTCCAGCCGGGCTTCCGCTCCCGCCCCTTCTTCCTCACCGGCGAGAGCTACGCCGGCAAGTATGTCCCGGCGGCTGGGTCGTACATCCTGGCCGTGAACCCGACGCTGCCGAAGCGGCTGCGGGTTAACCTCCACGGCGTGGCCATCGACAACGGGCTGACGCACCCCGTCGCGCAGGTGGCGACGCACGCGGACACCGCCTACTTCATGGGCCTGATCAACGCCAAGCAGAGGCGGGAGCTGGAGGCGCTGCAGGCGAGAGCCGTCGAGCTGACAAACGCGGCGAGGTGGAGCGAGGCGGCCGACGCGAGGGAGCTCGTGCTGTCGTTGCTGGAGAACGCCACGGGCCTGGCGACGCTGTTCGACGCGGCGAAGCAGCGCCCCTACGAGACGGGCCACGTGGGGAAGTTCGTGAACCGGGCGGAGGTGAAGGCGGCACTGGGCGCACGCACTGACGTGGAGTGGGAGGACTGCAGCGACACGGTGGGCGCGGCGATGCACGGGGACGTGATGAAGAGCGTGAAGCCGGGGGTGGAGGCGCTGCTGCGGGGAACGCGCGTGCTGCTGTACCAGGGCATCCGCGACCTCAGGGACGGCGTGGTGTCGACGGAGGCGTGGATGCGGGAGCTCAAGTGGGACGGCCTGACCGCCTTCCTCGTCGCCGACCGCGCCCTCGCCGGGTACGTGCAGCGCTTCGGCCCGCTCTCCCACGTCGTTGTCTACGGCGCCGGGCACCTCGTGCCGGCGGACAACGGCCGCGTGGCACAGGAGATGATCGAGGATTGGGTGTTGCAGGCGGGGCTATTCGGGCGCCACGGCGGCATGAAGCGCGCGGCTTGA</cdnaseq>

Protein Sequence

<aaseq>MAPPPAALLLVVLLLVGFEALTTKSGYLPIPTANASLFFAYYEATHPLTPPASTPIILWLQGGPGCSGLTGNFFELGPYFVNHDALSLSPNPFAWNRRFGLLFIDNPLGTGFSAAPSPAAIPTNQFVVAAHLFTALQSFFALQPGFRSRPFFLTGESYAGKYVPAAGSYILAVNPTLPKRLRVNLHGVAIDNGLTHPVAQVATHADTAYFMGLINAKQRRELEALQARAVELTNAARWSEAADARELVLSLLENATGLATLFDAAKQRPYETGHVGKFVNRAEVKAALGARTDVEWEDCSDTVGAAMHGDVMKSVKPGVEALLRGTRVLLYQGIRDLRDGVVSTEAWMRELKWDGLTAFLVADRALAGYVQRFGPLSHVVVYGAGHLVPADNGRVAQEMIEDWVLQAGLFGRHGGMKRAA</aaseq>

Gene Sequence

<dnaseqindica>1..54#109..1149#3661..3828#ATGGCTCCGCCGCCGGCGGCGCTTCTCCTCGTCGTGCTCCTGCTCGTCGGCTTCGTTAGCGCCAGAGCCATCACACCCTCAGCTTAAGCGTCGGCGGCGTTCCCCAAGGAAGCCCTGACGACCAAGTCCGGCTACCTCCCCATCCCGACAGCCAACGCCTCGCTCTTCTTCGCCTACTACGAGGCCACGCACCCGCTCACGCCGCCGGCCTCCACGCCGATCATCCTCTGGCTCCAGGGCGGCCCCGGCTGCTCCGGCCTCACCGGCAATTTCTTCGAGCTCGGCCCCTACTTCGTCAACCACGACGCGCTCTCCCTCTCGCCCAACCCATTCGCGTGGAATCGCCGGTTTGGCCTTCTCTTCATCGACAACCCGCTCGGCACCGGCTTCAGCGCCGCGCCGTCCCCCGCCGCCATCCCCACCAACCAGTTTGTCGTCGCCGCGCACCTCTTCACCGCGTTGCAGTCGTTCTTCGCGCTCCAGCCGGGCTTCCGCTCCCGCCCCTTCTTCCTCACCGGCGAGAGCTACGCCGGCAAGTATGTCCCGGCGGCTGGGTCGTACATCCTGGCCGTGAACCCGACGCTGCCGAAGCGGCTGCGGGTTAACCTCCACGGCGTGGCCATCGACAACGGGCTGACGCACCCCGTCGCGCAGGTGGCGACGCACGCGGACACCGCCTACTTCATGGGCCTGATCAACGCCAAGCAGAGGCGGGAGCTGGAGGCGCTGCAGGCGAGAGCCGTCGAGCTGACAAACGCGGCGAGGTGGAGCGAGGCGGCCGACGCGAGGGAGCTCGTGCTGTCGTTGCTGGAGAACGCCACGGGCCTGGCGACGCTGTTCGACGCGGCGAAGCAGCGCCCCTACGAGACGGGCCACGTGGGGAAGTTCGTGAACCGGGCGGAGGTGAAGGCGGCACTGGGCGCACGCACTGACGTGGAGTGGGAGGACTGCAGCGACACGGTGGGCGCGGCGATGCACGGGGACGTGATGAAGAGCGTGAAGCCGGGGGTGGAGGCGCTGCTGCGGGGAACGCGCGTGCTGCTGTACCAGGGCATCCGCGACCTCAGGGACGGCGTGGTGTCGACGGAGGCGTGGATGCGGGAGCTCAAGTGGGACGGCCTGACCGCCTTCCTCGTCGCCGACCGCGCCGTGTGGCGCATCGGCGAGGATGTCACGCCCAAAAATTTAGCCCAAATTTCCAGACTATTTGGTGTATTAAATCCCCGTCCAGGACCAGCCAGGGTACACAAAACGACAAGTAATAAACAGTTCCAAACGTAAATAAAGCGTAAAATACTTACAGAAGAGGCACTTAGTCCTCACACCGAAACAAAAGCAGCAGCAGCGGAAAAAGGCGATCCTAGCGGAGCTTCAGCTCCACTCCACAGGCAAAACTCAACTGGGGTCTGAGCCTTGGTCTTTTAACCTCGTCTTCAGCTCAGAAGCACTACACTTCTGAAAAGGGGGAATAATAGCAAGGCTGAGTACAACCACCGTACTCAGCAAGCCACACCAACGATGCAGATGTGCAAGGGGATACAAGGAGGGGTTTGTGGCTATTTGCATAAAGGCAGTTGTAAAACATTTATTGAGCAAACAGTAAAACTGTTGAGTAATTAAAGTAACATAAATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAATTACGACCATGAAGCATGGCCAGATGTCTCGAGCACGCAGCTCAACAAGATACTAGAAAGGTCTAATACTGTAATTATCCCATCAACTGAGCTAGTGGTAATTAAGCATGGTTAAGCATATAGTTCTAGCTAAGTCACATAAGTAACATGAGCTAGTCGATTTATTACCCAAGGTTGACAAATGATAGATATCAAGTAAACATGGCACAAGCGAGCAGATAGGTAAACCCTGATCCCGTGTAATTAGCAAAACATGCATATTTATTTGCAAACAGTAAAACATTTATAAATTAGGATCAAAATGCTCAAGGGAAATGTGTGGCTTGCCTTGTTTCTTCAAACAATCTTCCGAACTCTTATCCTTGCGACCGCGGACTTCCGAAACGACGGATTCTACACGCTGGCACGCAAAACGAGAAAAAACTCTAATAAAAACCAAGGAAACAGTACATAAAAAGTAAACAAACATGTAGAGCTCAATTTTAGATGAATTTTGCAAGTTGAATGGCTCAATTCGGAGTTCGAATGAATTAGATATGAATTTTAGAAGTTTTGAGCCATTTAAATGAATTTCTAGAATTATTAACGAATTATGACGCAATTATTATTTATTTTTCCAAAGGAAAAGAGGGTTGCTGACGTCATCAAAGGGGAGGGGCGGCGCCGGCAAGCGGACCCCCACCGGTCAGCGGCACAAGGGCGCCGGTCCACCGTGGACCGGGACCACCGAGGCGGTCCACCGCCGTTCCACGGGAACCGACGGCCCAGATCAGCCCGAGATGATCGGGCGGCCACGGGGTGGCGCGGCTGAGCACGGGCACAGCTCAGGCCGGCCCGGCCGAGCGACGGCTCCCGGCGGCGCGGCCTCCTGCGGCGACGGCCGACGCACGCGGGAGAGCGGCGGCGCGGCGCGGCAAGGGGTTCTGGGCAGCCTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGGCATGCGGCGCGGGATGGCGAAGCTGCTGGCACAGCGTGTGAGGCGCAGCGAAGGCGGGGGCAGCGGCGGCGCGTGACTGGAGATCGCCGGCGAGCGGCGGCGATGGGGATCGGCGTGGAGAGCTCGGTAGAGGGTGTGGGGGACTCGGGAAAACGGGGAAAAAGGAAGAGGAGGCCACGGGGATTGATTTTATAGCTCAAGGGGGCGAGGAGAGGGCCGGGGAGCGGCGGATTTCGAGGGGGAGTGGGGCGGCGTCGAGGGGGGAGAGAGAGACGCGGGAGGCGGCGACGTGGCCGGATTTTGCGGGGAGAGTGGGGGAAAACGGCGCGGACGTGGGCGACGACCGCGTCCACGCACGCGCGGGAGAGGGAGTCGCGCGGGAGAGTCGGCGACGTGGGAGGATTTGGCGGCCATGGCGGCGGTTGGGGATGGAGCTGGAGGTAGGAGATGACATGTGGGGTCCACGGGTCCCACCTGTCGGAGAGAGAGGGAGGGAGAGTTGGAAGGGGGTCGTAAAACAGACTTCGTGAGGGAGAGGGGAAACGGGCCGACGGCCCAAGAGAGGAGAGGGAGGCCGGCCGGGAGAGGGAGAGAGAGGGCGCGGGCCGCGGGAGGGGAAGGGAATTGGGCCGGGGCGGCCCAAAGAGAGGAAGGGGGATTTTATTTGTTTTCTTTTTATTTTAATTGATGCAATGATCTTTGTGCTATTAAAACTATTTCTCGAGCTCCGAAAATTCACGGAAAATTCCGGAGGGTACATTAAGGCACAAAGAATATTACAAAATATTCCCGGTCAATAATTTTTAAAGGAAATTTTTTAATTCCCTCAATAATTCACTTGATTAAGTTGATTTAACTTTTATTTAATTTCTAGAAAATGTATTATTAATTGATTTTTATTCCCGAACGAAAATCGGGGCGTTACAGAGGAGCTCGCCGGGTACGTGCAGCGCTTCGGCCCGCTCTCCCACGTCGTTGTCTACGGCGCCGGGCACCTCGTGCCGGCGGACAACGGCCGCGTGGCACAGGAGATGATCGAGGATTGGGTGTTGCAGGCGGGGCTATTCGGGCGCCACGGCGGCATGAAGCGCGCGGCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002996