BGIOSGA003000

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Revision as of 10:45, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003000| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA003000, complete gene.| tag = P0515G0...")
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Gene Name

BGIOSGA003000

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003000, complete gene.

LocusTag

P0515G01.29

Ensembl Transcript ID

BGIOSGA003000-TA

Ensembl Protein ID

BGIOSGA003000-PA

Length

3130

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:6790017..6793146

Sequence Coding Region

6790017..6790284,6790397..6790612,6792034..6792182,6792283..6792559,6792863..6793146

Genome Context

<gbrowseImage1> name=IndicaChromosome01:6790017..6793146 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:6790017..6793146 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCAGCACTCACCTTCAAACGAAATGACCCTCCTTCTCCTTCTCTTCCTCCTTGGATGCACACACTACGGTCACGCCGGCTCAGACCGTCCCAAGATCGACTCCATCTTCAGCTTCGGCAACTCGTACGCCGACACCGGCAACTTCGTCAAGCTGGCGGCGCCGGTGTTCCCCGGCATCCCTTTCAACAACCTCCCCTACGGCGAGACCTTCTTCGGCCACCCCACCGGCCGCGCCTCCAATGGCCGCCTCAACGTCGACTTCATCGCTGAGGGCCTTGGAGTCCCCTTGCTCCCCCCGTACCATGGCGAGTCGCAGGACTTCAGCCATGGCGCCAACTTCGCCGTCGTCGGCGCCACGGCGCTCGATCTCGCCTTCTTCCAGAAGAACAACATCACCAGCGTGCCCCCGTTCAACACCTCACTGAGCGTGCAGGTCGAGTGGTTCCAAAAGCTCAAGCCTACCTTGTGCTCGACAACCCAAGGGTGCAAAGACTACTTCGAGAGATCGCTCTTCTTCATGGGCGAGATCGGCGGTAACGACTACGTCTTCCTCTATGCCGCCGGCAAGACCGTCGACGAGGCCATGTCATACGTGCCAAAGGTCGTCCAAGCCATCTCTACCGGCGTCGAGGCGGTGATCAAGGAGGGAGCCAGGTACGTGGTGGTGCCGGGCCAGCTGCCGACGGGCTGCCTCCCGATCATCCTCACGCTGTACGCGAGCCCGGCCGCGGCGGACTACGACGCCGGCACCGGCTGCCTGTGGCGGTTCAACGCGCTCGCACGCTACCACAACGCGGTGCTGTTCGCGGCGGTGTCGCTGCTCCGGGCCAAGCACCCGTCGGTCGCCATCGTCTTCGCGGACTACTACCGCCCGGTGATCAAGTTCGTGCAAAACCCAGACGAATTCGGGTTCAGCGAGTCGTCGAAGCTCCGGGCGTGCTGCGGCGGCGGCGGCGGGGCGTACAACTACGACGTGGCGGCGGCGTGCGGCTTCCCCGGCGCGGCGGCGTGCCCGGACCCCGACGCGGCGATCAACTGGGACGGCATCCACCTCACGGAGGCGGCCTACGGCCAGGTCGCCGCCGGCTGGCTCCGCGGCCCGTACGCGCATCCGCCCATCCTCGCGGCCGTGCAACGATCTGACGAAGGAAACCCCATCCAAATGGCTACGTCGATGCCTGCCTCTTTCTGA</cdnaseq>

Protein Sequence

<aaseq>MQHSPSNEMTLLLLLFLLGCTHYGHAGSDRPKIDSIFSFGNSYADTGNFVKLAAPVFPGIPFNNLPYGETFFGHPTGRASNGRLNVDFIAEGLGVPLLPPYHGESQDFSHGANFAVVGATALDLAFFQKNNITSVPPFNTSLSVQVEWFQKLKPTLCSTTQGCKDYFERSLFFMGEIGGNDYVFLYAAGKTVDEAMSYVPKVVQAISTGVEAVIKEGARYVVVPGQLPTGCLPIILTLYASPAAADYDAGTGCLWRFNALARYHNAVLFAAVSLLRAKHPSVAIVFADYYRPVIKFVQNPDEFGFSESSKLRACCGGGGGAYNYDVAAACGFPGAAACPDPDAAINWDGIHLTEAAYGQVAAGWLRGPYAHPPILAAVQRSDEGNPIQMATSMPASF</aaseq>

Gene Sequence

<dnaseqindica>1..268#381..596#2018..2166#2267..2543#2847..3130#ATGCAGCACTCACCTTCAAACGAAATGACCCTCCTTCTCCTTCTCTTCCTCCTTGGATGCACACACTACGGTCACGCCGGCTCAGACCGTCCCAAGATCGACTCCATCTTCAGCTTCGGCAACTCGTACGCCGACACCGGCAACTTCGTCAAGCTGGCGGCGCCGGTGTTCCCCGGCATCCCTTTCAACAACCTCCCCTACGGCGAGACCTTCTTCGGCCACCCCACCGGCCGCGCCTCCAATGGCCGCCTCAACGTCGACTTCATCGGTGCACTTCCATCCCGAATTATACATTCCCGATTAATAATTAATACAAATCTGTTTCAGTCACAGAGAAACGCACATCAGTGTGATCATTTCAACAACTTTTGCATGCGCAGCTGAGGGCCTTGGAGTCCCCTTGCTCCCCCCGTACCATGGCGAGTCGCAGGACTTCAGCCATGGCGCCAACTTCGCCGTCGTCGGCGCCACGGCGCTCGATCTCGCCTTCTTCCAGAAGAACAACATCACCAGCGTGCCCCCGTTCAACACCTCACTGAGCGTGCAGGTCGAGTGGTTCCAAAAGCTCAAGCCTACCTTGTGCTCGACAACCCAAGGTACGTAGATAGTATAATGTATGCACACGTATTTGTGATATCGGTTGATGATCAGTTTTGCAGAAGATAGTACGGTGGTTAGGGGTGTGTGATTTCAGTCTGAAGGTATCCCGTGTTCAATTCCCAATAAACTTAATTTTTTTTGGAGGGACGTCGATCGATATCCCTATCTTTGATATCTTCAGGAAGTGTATATATATATATATATATATATATATATATATATATATATATGCTCGGTTGGTGTCGATCAGAGAGGTTAAATGATCGTCGGTTACTTTTTCAAAAATAACAAAAATAAACACACAGCTGAAATAATAAAAACAAATTAATGACACAAAAAGTTATTTTAACATTATCAGAGAAATTAATCCATCACGCCCAGCACAATTAATACTTGAATGGTGTTGTTACAGTACTCGCGTTGAAAATCAACCCCGTAAACAGTAAACATCAAATCGCTTTAAACTAAAAACGAAAATCAAGAACTTCACCAATTCATTCGATGTGAAATTTGAAAATAAGTTCTAGACATAGTCTAAGTTCTTTTTTTAATAGAAAAACACAAAAACAACAGATAAAATTGACGGGATAGAATAAAACATTAATCTAAGCAATCTGATAGGCATGCACGAAAACGTAGGTTAAATAAAACCAACCGATAGACGTAGGTTAAATAAAACTAACCGATAGAATTGAATCATTTCTTTGAGGTAAAAGCTAATTTCACTACGAATCTAACAAAACAACTACACTCAAATCCGACAGTTCCATCAAAATTTGAATGCAATATAAGATTAGTGAAAAGCTTATCTAAACTCACCTTGCGCAAAATCGGAATTTAATTGCGTGAATATCCTCGTCCCATATCTTTCATCTTCATGCGAACAAGCTAGAGCATGACTATATATTAACTGAAAACCCCCACCGTAGTCTCGGTCCCTCGACACTCACCATGCATTATCACCTTCTAGCTTCTCATGTGCATCAAAGATAAAAAAGAAAGAGCAATTTTATATCTCTCAGAAACAAAGTCCTTCTAACTTCATCCACCTAATCAAGGCCCTGCTTGATTCAGCTTAGAATTATTATAATCTAGATTATTAGAAGTAAGCTGAAACAAACAAGTAGATTATTATGCTAAATTATTATAATCTATAATCCAATAATCTCCTCTAGAGGAGCTTTTTTTAGATTATTGAGTGGCTAAAGACCCACTACCCTTAGATGCCTCTAATAATCCAGAGAAACAAACAACTCGTAGCTTATTTTATATCAACTTATTATAATACAGCTTAGAGTAATCTGATTTAATAATCTAGATTACGATAATCTTAAACTGAAATAAACAGGGCCTAAGTCCAAACAATAATCATTGTAGCCAATTATTAATCACCCATGTAACACATGATATTTTACAGGGTGCAAAGACTACTTCGAGAGATCGCTCTTCTTCATGGGCGAGATCGGCGGTAACGACTACGTCTTCCTCTATGCCGCCGGCAAGACCGTCGACGAGGCCATGTCATACGTGCCAAAGGTCGTCCAAGCCATCTCTACCGGCGTCGAGGTAGATAGATCACTGATCATAGATGTTCCTTAATCTCTCTCACATTCTGAGTTGCAGTCGTATCCAAGTTGGTTAACTAATTAACTAAACCAAAATGCAGGCGGTGATCAAGGAGGGAGCCAGGTACGTGGTGGTGCCGGGCCAGCTGCCGACGGGCTGCCTCCCGATCATCCTCACGCTGTACGCGAGCCCGGCCGCGGCGGACTACGACGCCGGCACCGGCTGCCTGTGGCGGTTCAACGCGCTCGCACGCTACCACAACGCGGTGCTGTTCGCGGCGGTGTCGCTGCTCCGGGCCAAGCACCCGTCGGTCGCCATCGTCTTCGCGGACTACTACCGCCCGGTGATCAAGTTCGTGCAAAACCCAGACGAATTCGGTGAGTCATTCGATCGATCACATCGGTTGGCTGATTATAAGCATAAGCCAAATGATATATTTGCAGGTGAAAAATAATTCGTGAATAAAATTTTTATATACGTGTCCTTAAATATTTAAAAATAAAGGCTGAAAGATAAACTACGATAAAAAAAATCCTAAAATCAACTTCAAACTGATAAGTAGTATAAACGAAAAGACGAGGCTAATTGATCGATCGAAGCTTCGGCACTAGCTGTATGTTCATGCATATCGCTAATAAACAACATGGTTCCATTAATTGATTAACTCACGCTGCATGCAGGGTTCAGCGAGTCGTCGAAGCTCCGGGCGTGCTGCGGCGGCGGCGGCGGGGCGTACAACTACGACGTGGCGGCGGCGTGCGGCTTCCCCGGCGCGGCGGCGTGCCCGGACCCCGACGCGGCGATCAACTGGGACGGCATCCACCTCACGGAGGCGGCCTACGGCCAGGTCGCCGCCGGCTGGCTCCGCGGCCCGTACGCGCATCCGCCCATCCTCGCGGCCGTGCAACGATCTGACGAAGGAAACCCCATCCAAATGGCTACGTCGATGCCTGCCTCTTTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003000