BGIOSGA003005

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Revision as of 10:45, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003005| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA003005, complete gene.| tag = P0515G0...")
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Gene Name

BGIOSGA003005

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003005, complete gene.

LocusTag

P0515G01.41

Ensembl Transcript ID

BGIOSGA003005-TA

Ensembl Protein ID

BGIOSGA003005-PA

Length

4557

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:6833701..6838257

Sequence Coding Region

6833701..6833977,6834071..6834289,6834382..6834530,6834602..6834953,6838025..6838257

Genome Context

<gbrowseImage1> name=IndicaChromosome01:6833701..6838257 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:6833701..6838257 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGAACTACTCACCCTCAAAACCAGTTGCCTTCCTCCTCCTCCTCCTCCTCTTCGGTTGCCTGCATTACGCTCAGGCGAACCCCGGCCATCGTCGTCCCAAGATCGACTCCGTCTTCAGCTTCGGCAACTCGTTCGCCGACACCGGCAACTTCGTCGAGCTGGCCGCGCCGCTGCTTCCCATCATGCCTTTCAACAACCTCCCCTACGGCGAGACCTTCTTCGGCCACCCCACCGGCCGTGCTACCAATGGCCGCATCATCATGGACTTCATCGCTGACGAGTTTCATGTGCCGTTCGTACCACCGTTTCTTGGCCAAGGTCGTCAGAACTTCACCCATGGCGCTAACTTCGCCGTCGTCGGTGCCAGCGCTCTTGATCTCGCCTTCTTCCTCAAGAACAACATCACCAACGTGCCCCCGTTGAACATCTCCCTGAGCGTGCAGCTGGAGTGGTTCCAGAAGCTCAAGCCAACCTTGTGCCAAACAGCCCAAGAATGCAGAGAGTACTTCAAGAGATCACTCTTCTTCATGGGAGAGTTTGGTGGCAACGACTACGTCTTCATCTTGGCCGCCGGAAAAACCCTCGAGGAACTTGTCCCCTACGTGCCAAAAGTCGTCCAAGCCATCTCTGCGGGCATCGAGGCCGCCGTAAAATTTTCTCTTACAATTTACACAGAGCTAACACTTCCGCTGTCGCGTACGAATAATATTGTCATTCAGGCGGTGATAAAGGAAGGAGCGAGATACGTGGTGGTGCCGGGGGAGCTGCCCAACGGCTGCGTGCCCATCATCCTGACGCTGTACGCGAGCAAGAGCAGAGGCGACTACGACGCGCGCGGCTGCCTGAAGAAGCAGAACGCGCTCGCGCGCTACCACAACTCGGCGCTGTTCGAGGCGGTGTCGCGGCTGAGGCACAGGTACCCTTGGGTGAAGATCGTCTACGCCGACTACTACAAGCCGGTGATCGACTTCATCAAGAAACCGGCCAGATTCGGATTCAACGGCTCGTCGACGCTACGCGCGTGCTGCGGCGCCGGCGGCGGGCCGTACAACTACGACGCGACGGCGGCGTGCGGGCTCCCCGGCGCGGCAGCGTGCCCGGACCCGGCGGCGTTCATCAGCTGGGACGGCATCCACCTCACGGAGGCGGCCTACGCCCGCATCTCCGCCGGCTGGCTGCACGGCCCGTACGCGCATCCGCCCATCCTCTCGGCCTTGCGCCATTAG</cdnaseq>

Protein Sequence

<aaseq>MGNYSPSKPVAFLLLLLLFGCLHYAQANPGHRRPKIDSVFSFGNSFADTGNFVELAAPLLPIMPFNNLPYGETFFGHPTGRATNGRIIMDFIADEFHVPFVPPFLGQGRQNFTHGANFAVVGASALDLAFFLKNNITNVPPLNISLSVQLEWFQKLKPTLCQTAQECREYFKRSLFFMGEFGGNDYVFILAAGKTLEELVPYVPKVVQAISAGIEAAVKFSLTIYTELTLPLSRTNNIVIQAVIKEGARYVVVPGELPNGCVPIILTLYASKSRGDYDARGCLKKQNALARYHNSALFEAVSRLRHRYPWVKIVYADYYKPVIDFIKKPARFGFNGSSTLRACCGAGGGPYNYDATAACGLPGAAACPDPAAFISWDGIHLTEAAYARISAGWLHGPYAHPPILSALRH</aaseq>

Gene Sequence

<dnaseqindica>1..277#371..589#682..830#902..1253#4325..4557#ATGGGGAACTACTCACCCTCAAAACCAGTTGCCTTCCTCCTCCTCCTCCTCCTCTTCGGTTGCCTGCATTACGCTCAGGCGAACCCCGGCCATCGTCGTCCCAAGATCGACTCCGTCTTCAGCTTCGGCAACTCGTTCGCCGACACCGGCAACTTCGTCGAGCTGGCCGCGCCGCTGCTTCCCATCATGCCTTTCAACAACCTCCCCTACGGCGAGACCTTCTTCGGCCACCCCACCGGCCGTGCTACCAATGGCCGCATCATCATGGACTTCATCGGTACAACATACAAATGAACATACAGTAATTTCAGTTTGCTTTCAGTTCTGATTCAAATGAACATACAGTAATTTGCTCTATCCAACTTTGCAGCTGACGAGTTTCATGTGCCGTTCGTACCACCGTTTCTTGGCCAAGGTCGTCAGAACTTCACCCATGGCGCTAACTTCGCCGTCGTCGGTGCCAGCGCTCTTGATCTCGCCTTCTTCCTCAAGAACAACATCACCAACGTGCCCCCGTTGAACATCTCCCTGAGCGTGCAGCTGGAGTGGTTCCAGAAGCTCAAGCCAACCTTGTGCCAAACAGCCCAAGGTACGTATTTTTGTTGTCTTGATCACTCGATTCGATCCATTGCTGACCGGATTTAATTAATCTGAACTTTTTCCTTGCTCGTTCTTACACAGAATGCAGAGAGTACTTCAAGAGATCACTCTTCTTCATGGGAGAGTTTGGTGGCAACGACTACGTCTTCATCTTGGCCGCCGGAAAAACCCTCGAGGAACTTGTCCCCTACGTGCCAAAAGTCGTCCAAGCCATCTCTGCGGGCATCGAGGTCGTACACTCGTACATTTTGAACGATTTTACAATCCTTAAAAAAAATGAAACAATTTTCACAATTTACAGGCCGCCGTAAAATTTTCTCTTACAATTTACACAGAGCTAACACTTCCGCTGTCGCGTACGAATAATATTGTCATTCAGGCGGTGATAAAGGAAGGAGCGAGATACGTGGTGGTGCCGGGGGAGCTGCCCAACGGCTGCGTGCCCATCATCCTGACGCTGTACGCGAGCAAGAGCAGAGGCGACTACGACGCGCGCGGCTGCCTGAAGAAGCAGAACGCGCTCGCGCGCTACCACAACTCGGCGCTGTTCGAGGCGGTGTCGCGGCTGAGGCACAGGTACCCTTGGGTGAAGATCGTCTACGCCGACTACTACAAGCCGGTGATCGACTTCATCAAGAAACCGGCCAGATTCGGTGAGTCCGTTGGTTCAATGGTTAATTAATTCTTCCCCTTAATTGCACATGCGCTTTTAGAAATGCTATCTACTCAATTACTCACCATGATCATCACAGTCCTCACCATGAACAAGTTGCATTGTTTGACTTTGCACGTGTTAAAAGAAAACTAGCTAATGGATTTTTTCGCATATTTTTTACCAAGCTGCTTGATTTCAAAATTAAAGTGGAATGGATGTACAATTCACATCTTCTATTTTTACAGGTATATATTTGTATTAGTATATAATTTATTTTAAAAGTGAATTGGGTTTAATATACAACTCTTTTCTTCTATTTACACACTTCCAATTGTTTTTTTTTTGGATTATATGGTAGACGCATGACGCACATACAACACTATACTTACTCACCTGCGAATGAGTCCTATAACACACACACACTCAAAAGAGACCAAAACCAGTAGTATATATCCCTGATGTTACTAATTCATATTAAAAAATCCAATTACGTGTGCATAGACTTATTTTGGAGGGCGAAATCATACAACCACAATTCCACCAATACACGATTGATGCTTCTCCTACTTCCAGTTGTATTTTTATGATCATTATTTTTCTTGTTCTCTGGGTGTGTTTAGTTCCTGAAAAAAAGTTGGAAATTTGAGGAAAGTTGGGAGTTTGGAAAAAAAGTTAGAAATTTATGTGTGTAGAAAAGTTTTTATGTGATATGATGTGATGGAAAGTTAGAAGTTTGGGGTAGTTGAGAGTGAACTAAACACGGCCTCTATTAACGTGAGAATTTCATGAGTGGAAATATGGTTACTCTACACTGAACTAAGTTTTAAAAGTTGAATTGGATTTCATACTCATAGCTCTGGAAATATTGTGCAATGCTAGTTTTTAAAAGTAGAGGTGGACTTGATATATGTACAATCATTAACTTGTTTTTCCATAAATACAATTGTACTTGTATACACTATAATCGGTCTGAACCCACTATATGTACATCGATTGGTGTAAATGTTTCTCTTTTTCTTGGATCATTAATGTACTAATAAGGTCGTCTCTAGAGCAAACATTATGCTAAACTTTCTTCTGATAATAATTTAATAATATGATCGATACACAGACTAACTTGGCCATTTCAAGATCTAGCAATGCCTCTACAAATTGGAATAAGTAAAGTAGACACGTTGCCCATAGTAAACGCTTCGTGTACTATGTACGTAGACTATCCCCTAAACGGGGTTGAAGTCGTGAAGATAATGCCAATCGTTGAATTCACCCATTCTTAAACTCATCGTGGCAATAATCCAAAATTGACAACTACGGTCTCATCGTGATCGATCAGGACTTAATTGGACTTCTTTCGTAGCCGTCTAGCTCTCTTGTGATCGAACCAGCTATAGCATGTGCTACTCCATCTGTTTCATATTATAAGTCGTTTGACTTTTTATTTAGTTAAACTTTGTTAAATTTGATCAAGTTTATAGAAAAAATAGTTATATTAAATCTAATATTAAATATATTTTGATAATATATTTTTTCTGTGTTAAAAATAGTACTATATCTATATATATATATATATATATATATATATAGTAAATTTGTTTGGTGCTCCATGGTGCCCGGGCACCATTGTTGAAATTGAGTATATACCCAATTCAAATGAGCATGAAACTTTTTCAATTATTTAGGTATTAATATTAACTACTTTACTAACTAGTTGAAAGCAAGTTTGAACTGAATTTGAACTTGTTTTTGTTAGATTTTGATTCTAGGTATATAGCATCCATACATATAATTAGTTAGGTATGTAATCATGGATTGTGAAATAAAGTTAAATTTGAGTTGTTTTGTTGATAGGTATAGGTATGAATCGAATTCTTATAACTAGGTATATACTCACAATTTGAAAATTTTAAAAAATTTGAGTGATTTTGTGCATTTGAAACCATGGTGCCCGAGCACCATGGTGCCCCATATGAGTGTCCTATATATATATATATATATATATATATATACCTAATAAAAAAATACGTAAGGATTCCCGTATTTCTTCGTCCGTCATCCCACACACGCGCCACTAAAATCTGTTTTAATCCGAGTTGGGTCGGTCCGTTTTTATTGTATTTGCAAAACCGCAGTTGATATAGTATATGTATCTTCCATGTAATCGTATAACACAAGTGGTAATTTGCCTGCTTGGTTTATGTGGAAAATCTTCAATCTGGCCACTAGGGTTCGACTCCCACCTTTCCTCTCATTTTACACACACCTATTATTACTTGCTCTGCATGCGGTCTCTCCTGTAATAAGTCTATCCCTCGTGTACTGTGCCTATAGGACCTCCTTGCCTAACGGGTCGGGCCGACGCACGTTGTTTTGGCCCTTATTCTTTTTTCCCTTATTTTTTCACCCAAAAATCATTAAATGTTTACATAAAAAAAATTTAATCACTTTGAACCATTATTTTAAGATATAAAATTGCTGTAAATTTTGCATGTGCGTTTTAATTTATTTCTAACTAAATGGAACCCACGTGAAGAAAAAAAAAAGTAAGTCTTCGGGTAAAGTTTTTTTCATCGTTCATCACACGCGGAATCACCTTCTTATATTTCGGCAATAATTTGTTTTTTTATAACGAGGGTTTGTTCAGATTGTAGCTAAAATAAACCTTACTAAATTTTGGCATGATATTTTATGTATTTATTAGAGTATGATAAAAAACTAAATGGATACACATATTTGGTAACTTTACTAAAATTTGATAAGGTTTATTTAAGATACAATCTGAACAGGCCCTGACATCAGTTTCCTAATATGCAAAAGCGATATAAAATTTCAAGATTTGGAAGGCATGTACAAATTTGAAATTTTGTACACATGTATCATACAAGTACACAAGCAATATTAGCAATCCATATTTGTTTGATATTCACCCGTTGCAACGCACGGGCATATTTACTATTTATTGTATAAATTTGATCAAATTCAAAGAAATTTGGTTAGAAAAAAGTTAAACGAGATATAATATGAAATTGATGGAGTAATACCCAGGGGCCTGATCGGTTACTGACGCTGCAGGATTCAACGGCTCGTCGACGCTACGCGCGTGCTGCGGCGCCGGCGGCGGGCCGTACAACTACGACGCGACGGCGGCGTGCGGGCTCCCCGGCGCGGCAGCGTGCCCGGACCCGGCGGCGTTCATCAGCTGGGACGGCATCCACCTCACGGAGGCGGCCTACGCCCGCATCTCCGCCGGCTGGCTGCACGGCCCGTACGCGCATCCGCCCATCCTCTCGGCCTTGCGCCATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003005