BGIOSGA003017

From RiceWiki
Revision as of 10:45, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003017| Description = Os01g0219100 proteinPutative uncharacterized| Definition = Oryza sativa Indica Group BGIOSGA003017, complete gene.| t...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA003017

Description

Os01g0219100 proteinPutative uncharacterized

Definition

Oryza sativa Indica Group BGIOSGA003017, complete gene.

LocusTag

P0489G09.17

Ensembl Transcript ID

BGIOSGA003017-TA

Ensembl Protein ID

BGIOSGA003017-PA

Length

2482

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:6997722..7000203

Sequence Coding Region

6997722..6997838,6997938..6997991,6998717..6998790,6998984..6999101,6999197..6999255
,7000125..7000203

Genome Context

<gbrowseImage1> name=IndicaChromosome01:6997722..7000203 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:6997722..7000203 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGCCCTCACCCGCCTCCACCGCGCCCTCGCCGGCGGCGACGACGACGAGGAGCAGCCGGAGGATTCTATCCTTGGCGACACCGAGGGCATATGCTCCCTATCCCCTGTCCAGCGGGTCTACGGCTTCGCCGCGTGCTTGGTTGCGGGACTGGCTCTGATGATCCTGTCACTTGTAGTTTTCGTCAGACCCATCAAATTTGCAGTCATGTTTACATTTGGAAACATCCTGGCAGTTGGGAGCACAGCTTTCCTAATAGGGCCAAGTCAACAGTTGAGGATGATGCTTGACCCAGTTCGTGTGTATGCAACAGCTATTTACGGTGGATTTGTTTTTCTGGCTCTAATTTTTGCTCTTTGGATCCATTCCAAGGTTCTAACATTGATTGCAATCATATGCGAGATCTGTGCTCTGTTCTGGTATAGTTTGAGCTACATCCCTTTCGCTCGGCGAATGGTGTCTGACCTGATGGTGAAGCTCTGTGACACTGAACTTTGA</cdnaseq>

Protein Sequence

<aaseq>MDALTRLHRALAGGDDDEEQPEDSILGDTEGICSLSPVQRVYGFAACLVAGLALMILSLVVFVRPIKFAVMFTFGNILAVGSTAFLIGPSQQLRMMLDPVRVYATAIYGGFVFLALIFALWIHSKVLTLIAIICEICALFWYSLSYIPFARRMVSDLMVKLCDTEL</aaseq>

Gene Sequence

<dnaseqindica>1..117#217..270#996..1069#1263..1380#1476..1534#2404..2482#ATGGACGCCCTCACCCGCCTCCACCGCGCCCTCGCCGGCGGCGACGACGACGAGGAGCAGCCGGAGGATTCTATCCTTGGCGACACCGAGGGCATATGCTCCCTATCCCCTGTCCAGGTAAACCCAGGAACTTGGACAATCCCCTCGAATGCAGGATCAAATGTCTTGGGGTTTGCGTCGATCTGATTTTGTTGCTCTTCGCCTTGGCTTCTCCAGCGGGTCTACGGCTTCGCCGCGTGCTTGGTTGCGGGACTGGCTCTGATGATCCTGGTACGCACGCACGACGCTGCAATTTGGTGCCTGAAATGCAATTCGTTGTCCGTACGGGCTTGCGGCTGCTAGTTCCTCATGTGGATGTCGAATTAGCTTTGTAGGTGTTGCTGTTTCCACCAACAGGATCGTATACACAATGTATTTAAGCAAAATAGTAGTATCCGCTATCCAATGCCTCTTGGGTGGTTATACGGAAATATGTGATTTGAAATTTAGGTTTACCAAAATATCAGCAAGTTTAAAGTCCTCACCAGAAGGGGAAAGAAACAAAACCAAGTTTCAAGTGTTCTGACATATGGTCACTCCGCAGTCTACTCTTTAAGAAAATTGGTTTAGCTGCAATTGTAAATTATTAAAGTTGCCTGTCTCAGGAGGCAGGAGCACATGATATGTTTTATTGTCTCAGTCCTAGAGAAGTAGTGCTATTGTTTTCTCTTAGGTGCACTGTAGATCTTCATTGCTAATTGCTATGCTCACGAGTACTAATTTGTTGGTTTGATCTAAGATAAATAAGACGATTTGTTAATTGACTGAATTCCACAGGGGCAAAGAAATCACATTATTAGGAAATTAAGACCAGATGCTTTACTGTTATAGCTAAAACTTATAGATTCTGTAAGATAATTTAGTGGTAGCAAACATTCCTGCACTTCAAATTGTTGATTTTGTTGTGATTACTTTGAAAATTTTCTGAGAAGTTACTTTTCATTTTTCCTGTGCAGTCACTTGTAGTTTTCGTCAGACCCATCAAATTTGCAGTCATGTTTACATTTGGAAACATCCTGGCAGTTGGGAGGTGATTACACAGATTTTCACTCATATATCATTTTTGTTTTCAGATTAGCTTAGTGATATCCCTTATATTTAGTACCAAAGTGTATACTGGTTTTGTTTTGTACTACTGATATGCATGTTTAGTCATTGCATTAGTATTACTGGTTTTCTTTTTGAAAGTTTGCCATATGTTGACATGAACCTTTATTTGGCAGCACAGCTTTCCTAATAGGGCCAAGTCAACAGTTGAGGATGATGCTTGACCCAGTTCGTGTGTATGCAACAGCTATTTACGGTGGATTTGTTTTTCTGGCTCTAATTTTTGCTCTTTGGGTTAGTATTATTTATCCACCATCCTTTTCCTTATGGACAGATTCTTGTAAGTAAACCACTTAATCTTGTGTTTGCCCTGTGCTTTAATTGTGCAGATCCATTCCAAGGTTCTAACATTGATTGCAATCATATGCGAGATCTGTGCTCTGTTCTGGTAAGCCTCCTTTTCTTAAAATAATACTAGTGATTTATGAGTCTTAACCTATTGTTGTAATACTGATGCCATTTGTAAGTATGCCTTAATTAAATTGATATAAGCTTTACAAAAAGATTGTAAGATTAGAATAATATTCGCTGTGCTTTTGCATAGAGAAGTGGTAAACAAAACTGGCCTTTAGTTATACTATGCTAACCGTAGCAACGCCAGGCACACATGTGGTTAATTATCTGTATTTGAGACTGGTTTTGATCCTTGAGTGTTCTCATGTACTGAATGCGCGTTGAGAAAACATTAGTGAACTCTGAACTGATCTTACAAATATCACGATTCTAGAAAACATTAGTGACTGCATGAATCAACTTCAGGTGTTCATATTAAGTGTTTGTCTGACGTTGCCAAACATTAGTGCTCAGTCAGTGCATGTACATTGTGGAATGTTGAAGCAACAAAAGGCGAACTCTGCAGAAACACGAGGGCTGCTGCCTACATTTATCTTCTGCATATCATGAATCCATAATCTGAGTCATCAACAGGAAAGAAGCGTGTAGGATGTTTGCTGTTTGCGATGGAGGTGCAGTAGCACCACGAATTAGGATCACATGTATCCGATACCTCACTTAGGTACTTTTTCGTGGGAGTTTGAAAAATTAACATAGTTTATATGGTATATCATGAAGCTAGATGCATGTCTCTTGACACCAGAAATCTCCATACCATGAAACAAATTGTATTTCCACCCCTTCTGTTTTTATTTTATGAAATGGATCAGTATTGTTTGTCTGTTTGTATCTTTATTTCTCACTCTTGTCTCTTGTGACAAATTAACTGATATTGGCTCCATATTCTCCTCTCTTGCACCTCAGGTATAGTTTGAGCTACATCCCTTTCGCTCGGCGAATGGTGTCTGACCTGATGGTGAAGCTCTGTGACACTGAACTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003017