BGIOSGA003026

From RiceWiki
Revision as of 10:45, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003026| Description = BGIOSGA003026| Definition = Oryza sativa Indica Group BGIOSGA003026, complete gene.| tag = | tid = BGIOSGA003026-TA|...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA003026

Description

BGIOSGA003026

Definition

Oryza sativa Indica Group BGIOSGA003026, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA003026-TA

Ensembl Protein ID

BGIOSGA003026-PA

Length

3304

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:7141250..7144553

Sequence Coding Region

7141250..7141369,7141444..7141713,7141835..7141888,7142440..7142501,7142657..7142725
,7142799..7142850,7143004..7143078,7143659..7143788,7143871..7143941
,7144338..7144553

Genome Context

<gbrowseImage1> name=IndicaChromosome01:7141250..7144553 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:7141250..7144553 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCAGCGTCGCCTCCTCCACCGTGTTCGCCTCCTCCCTCCCCCACCACCGGGCGACGACGAGGGCGCCTCCAACGCCGCCGCGCATCCCGCGCCGCGCCAGGCTCCCCGGCCGCTCGGTGGTGAGCTGCCTGCCGAAACGGGGGTCGGAGAAGCTTGTGGTCACTAGGGCATCGGATGAGGAGGGGCCGCCTGAGCCGGCGGGCCAGGGCCGGGGAGGGGGAAGAGCCTGGCCGTCGTTGGACGCGTCGTCGTGCGGGCTCGCGCTCGCGGCGGCGGCGGGGGTGCTCATGCTGCAGGGGTCGCAGCAGGCTCTGGCCGGCACGGAGTTCATGGGGATGCAGGATGTGGTGGGGGATCTCGGTGACATCAGTACAGGTTTCGCATCAGCTTTTCTGTTGATCTTCTTTTCTGAGCTAGGGGACAGAACATTTTTCATCGCGGCACTTCTAGCAGCTAGAAATTCTGGAGCGATCATTTTTCTTGGCACATTTGGAGCGCTTGCGGTAATGACAATTATATCTGTAGTTCTTGGACGAGCATTTCACTATGTTGATGGCATCATTCCATTTAGTTTTGGTGGCACAGATTTCCCAGTTGATGACTTTCTTGCTGCCTGTCTTTTGGTATATTATGGAGTTACTACATTGCTTGATGCAGCTTCAGGCGATGAAGAAAAGATGAACGAGGAGCAAGAGGAGGCTGAGTTAGCAGTTTCAAAATTTTTGGGAAATGGTGCGGGGATCATATCTGCTGCCAGTACTATTGCTAGCACATTTGTTTTGGTTTTTATCGCCGAATGGGGTGATAAATCATTTTTCTCTACCATCGCACTTGCTGCGGCTTCATCTCCTCTGGGTGTCATTGCAGGATCACTTGCCGGTCACGCTGTTGCAACATTGATTGCAGTTCTTGGTGGCTCTTTGCTGGGGACGTTCTTGTCTGAAAAGGTATACTTATACTACCAACGCAACTTGGTTTCCCTGTCCAAATGGATTTTACCCGAGTCACCTGATCCACTAGGTGGTTTTGCTCCTATGTTTAAAATGTTATTATTTTTTATGGACTTTGCTACAGATATATGGCTTGAATTTCCATTCAATTATCAGTTTGATTGA</cdnaseq>

Protein Sequence

<aaseq>MASVASSTVFASSLPHHRATTRAPPTPPRIPRRARLPGRSVVSCLPKRGSEKLVVTRASDEEGPPEPAGQGRGGGRAWPSLDASSCGLALAAAAGVLMLQGSQQALAGTEFMGMQDVVGDLGDISTGFASAFLLIFFSELGDRTFFIAALLAARNSGAIIFLGTFGALAVMTIISVVLGRAFHYVDGIIPFSFGGTDFPVDDFLAACLLVYYGVTTLLDAASGDEEKMNEEQEEAELAVSKFLGNGAGIISAASTIASTFVLVFIAEWGDKSFFSTIALAAASSPLGVIAGSLAGHAVATLIAVLGGSLLGTFLSEKVYLYYQRNLVSLSKWILPESPDPLGGFAPMFKMLLFFMDFATDIWLEFPFNYQFD</aaseq>

Gene Sequence

<dnaseqindica>1..120#195..464#586..639#1191..1252#1408..1476#1550..1601#1755..1829#2410..2539#2622..2692#3089..3304#ATGGCCAGCGTCGCCTCCTCCACCGTGTTCGCCTCCTCCCTCCCCCACCACCGGGCGACGACGAGGGCGCCTCCAACGCCGCCGCGCATCCCGCGCCGCGCCAGGCTCCCCGGCCGCTCGGTACGCGCGCGCGCAGGCGCTTTCATCCACGTCGTAGGGGGATGACGATGGCCTGATACGAGCTGTTTGTGCAGGTGGTGAGCTGCCTGCCGAAACGGGGGTCGGAGAAGCTTGTGGTCACTAGGGCATCGGATGAGGAGGGGCCGCCTGAGCCGGCGGGCCAGGGCCGGGGAGGGGGAAGAGCCTGGCCGTCGTTGGACGCGTCGTCGTGCGGGCTCGCGCTCGCGGCGGCGGCGGGGGTGCTCATGCTGCAGGGGTCGCAGCAGGCTCTGGCCGGCACGGAGTTCATGGGGATGCAGGATGTGGTGGGGGATCTCGGTGACATCAGTACAGGTTTCGCATCAGTTAGGAGAACTGCCTCTACTACCCTTTGATTACTACCCTTTCAGTTCTACGCAGCTGTTTGTCCTCAGTTACAGTGTTCTGTGTTGATGTTGTTCATTGTATTCCAAATCTGCATTTCAGGCTTTTCTGTTGATCTTCTTTTCTGAGCTAGGGGACAGAACATTTTTCATCGCGGTAAGCGCTATCGTAACTATCCATTTATCATGTATGTACATAGTTTACATTGTTTTGCTGCAAATTGAATTTATAAGGATTCTTCATAGAGTGCTAACTTCAAATGTGTCTTGTGCAAATCATATCCTTGTCCAGAACTTCATGTATTTAATTCGTACTTCGATGTTCGAATGTATTTAAGTCATTTGAAGTAAGAAACGACTTATGCATCTGAGCGTCTCAATGATGATCAGCTTTTAAGGCATTGCATCTCATCCTTTGAGGGAATAGAGAAGTTGCATATGTGTTAGATATTAGCAGGGTTCCACAATACCAACTACCCAAAAAAAAAGGAAATCTTACAGGACAGGAAGGGTTACCCAACTACAGTTAGTTCAAGGCTTCAAGACCTTCCTGTTACTGAGTGATAGTATGAAATTCCATAAGAAGTTTATTCCGTTTCACAAGCTATGTGGCTTTGCTATTTACTTCTTTTACTGTACAAACAATTTGATAGTAATTTATACTAAATTGATCATTGATAAATGCTGCAGTTGCATGTATTTCAATAGGCACTTCTAGCAGCTAGAAATTCTGGAGCGATCATTTTTCTTGGCACATTTGGAGCGCTTGCGTAAGTCTACAATTGTGTTGTTATGCTTTCTATATGCTAAGTTGCTTTTACTGTATTAGTGCAAGCTTTATGTGCTTATAATTACAGTTACAAAATCGATGCTACAAAGATATCTGCCATACACCAGTTTGGTTGACCCTTTTGGTGATTAACAGGGTAATGACAATTATATCTGTAGTTCTTGGACGAGCATTTCACTATGTTGATGGCATCATTCCATTTAGGTAATTGTACCTATTGTCAAATAGGACCTTCCATTAGTCATTCTTTAGTTAACATACCTCTTGGCATATGCAGTTTTGGTGGCACAGATTTCCCAGTTGATGACTTTCTTGCTGCCTGTCTTTTGGTAAGGAAAATATTGCATATCATTGTTACATGCACACATGTAGAAATATGAACTCAATATTTGTGAAAGAATTCCAGTGTATGTATGCTTATTACTCATGAATTTCTATTTGAGGGTAACTTTATCATTCTAAATTATGTTTAACTATTTTAGGTATATTATGGAGTTACTACATTGCTTGATGCAGCTTCAGGCGATGAAGAAAAGATGAACGAGGAGCAAGAGGAGGTAGAACATCAGAATTTTAAACTCTTAGGTTTAGTCAAGTCAATTATATTGCTAATTTCACGTAAAAACACTGTCTGGATCGAAGAAAATTCTCTTTAAATTTTTGTCACTGATTGAAGTTGTAGTCTCTAAAAATATTCAGTTGATCAAATTTTTATATGCTAATTGCATTTGAGTTCATATGTTCTGTTTTATGCTTAATTTACTAATATATAATATAGATATTGATCTGTTTGTGTCCTTGTTTTAAATAAAACCTATCAAAAGTACCTCAGACATTTTCATTGCATGATTAGCAGAACAAATTATTTTCAGAAGTGTGCTAAAAGGGCATGCATTCAAGTTGAACATCAATTTTCAGGAAAAATATTACAAATAAAATGTTCCAAGGACAAATTATTTTCAGAAGTATGCTAAAAGGGCATGCATTCAAGTTGATTATCAACTTTCAGGAAAAATATTACAAATATTATGTTCCAACGAATTGATATCTCACTGCAATTGTTTGGTTCATATGGTAGTATGCTTTCCCTTGGTTATGTTTCTATCTGATATGGAACTCCGTATAACACAACTGCAGGCTGAGTTAGCAGTTTCAAAATTTTTGGGAAATGGTGCGGGGATCATATCTGCTGCCAGTACTATTGCTAGCACATTTGTTTTGGTTTTTATCGCCGAATGGGGTGATAAATCATTTTTCTCTACCATCGGTAAATCCCATAAACTTATTTTATATTAGTGTGAGATCTGTTTCTATCACAGCCAATATTAACACCAGTTTCCTTGTTACAGCACTTGCTGCGGCTTCATCTCCTCTGGGTGTCATTGCAGGATCACTTGCCGGTCACGCTGTTGCAACATTGGTAATATATATAGAGGCAAATAGTTGTTGAGATGATCCAGAACTAAACTCTACTATGCAGGAACATTCTGTAGCAAATTATCCATGACTAATGGCATTAGTATCCTGAAAATTGCTTAGTTCTTAGGTACTTGATCCATTGTTGCCCCAGTCATGTGCCTTGCGAGAATCCTTTACTTTTAAAAGGATTAATTAACTTCCCTCCTTCATAGCATAACTGGGCAAGGAAGCCTTTTCAAGCTATTCCATCACTCCCCAAAGAACACCTGTTTTATGGATCATAAACCCTATGAGGGGCAGGAAACTTACCAACTAGTGTTCCTGTTGCTCAACTTCAGAACTTCTATCTCTTTTTTCCCCTGGAGATGTGATATTGATCAATTTATCTCTACAACAGATTGCAGTTCTTGGTGGCTCTTTGCTGGGGACGTTCTTGTCTGAAAAGGTATACTTATACTACCAACGCAACTTGGTTTCCCTGTCCAAATGGATTTTACCCGAGTCACCTGATCCACTAGGTGGTTTTGCTCCTATGTTTAAAATGTTATTATTTTTTATGGACTTTGCTACAGATATATGGCTTGAATTTCCATTCAATTATCAGTTTGATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003026