BGIOSGA003032

From RiceWiki
Revision as of 10:45, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003032| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA003032, complete gene.| tag = OsI_009...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA003032

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003032, complete gene.

LocusTag

OsI_00960

Ensembl Transcript ID

BGIOSGA003032-TA

Ensembl Protein ID

BGIOSGA003032-PA

Length

4834

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:7275086..7279919

Sequence Coding Region

7275086..7275496,7279257..7279919

Genome Context

<gbrowseImage1> name=IndicaChromosome01:7275086..7279919 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:7275086..7279919 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGAGGAGGGGTTTGTGGCTCTCAAGAGGACGGAGCATGTCGAGGTGACGTCCTTGGCGGTGGCGGTCGAGGCGACGCCGTCGGCGAAGGGGGGAAAGGGGAAGGTTGTGGTGGGTGGTGGTGGCGCCGGCGGCGGCGTTGGGCCGACGAGGGTGAGGGTGTTCTGTGATGACTTCGACGCGACGGACTCGTCGAGCGATGAGGATGAGGAGGAGGAGGTGACCGCGCGGCGGAGGGTGAAGCGCTACGTGCAGGAGATTCGGTTACAGCGCGCGGCGGCGGTGGCCGTGCCGCCGGTGAAGGTGAAGGGCGAGGAGGTGTTCCCGGCCGCGGTGTCGGCGAAGATGGCGGAGGCCGCGAAGGCGAGGGTGGTGTTGGCGCCTGGGAGGAAGAGGAAGGCCGGCGGGTACGCGGCGGAGATCCGCGACCCGTGGAGGCGGGTGCGGGTGTGGCTCGGCACGTTCGACACCGCCGAGGAGGCCGCCAAGGTGTACGACACGGCGGCCATCCAGCTACGCGGCCGCGACGCCACCACCAACTTCAACCAGTCCGGGGACTCGGCAAGCCTCGACGTCCCACCCGAGGTCGCCGAGCGCGTCCCGCAGCCGCCGGGGGCGTCCAAGAACGCCTCCCCGGCCACCTCCTACGACTCCGGCGAGGAATCCCACGCCGCGGCGGCCTCCCCAACCTCCGTCCTCCGTTCCTTCCCTCCCTCCGCCGTCGTCGCGACCGCCGTCACGGCCAACAAGAAGCAGCCGCCGCCGCCGCCTCTCGTCGTCCGCGAGACCGACGAGTCGGTCGACGTCTTCGGCTGCTCCTTCTCCGACGACGGCGGCTTCGCCGGCGAGCTCCCACCTCTCTACACCGACTTCGACCTCCTCGCTGACTTCCCGGAGCCCCCGCTGGACTTCTTGTCCAACCTCCCCGTGGAGCCCTTCTCCCTGGCTCCCTTCTCCGGCAACAATGGGTCACCGGACCTCCACCTCGACGACGCCCCATCGCCGGCGGCGGCACAAGTGGACGACTTCTTCCAAGACATCACCGACCTGTTCCAGATCCCCGTCGTCTAG</cdnaseq>

Protein Sequence

<aaseq>MEEEGFVALKRTEHVEVTSLAVAVEATPSAKGGKGKVVVGGGGAGGGVGPTRVRVFCDDFDATDSSSDEDEEEEVTARRRVKRYVQEIRLQRAAAVAVPPVKVKGEEVFPAAVSAKMAEAAKARVVLAPGRKRKAGGYAAEIRDPWRRVRVWLGTFDTAEEAAKVYDTAAIQLRGRDATTNFNQSGDSASLDVPPEVAERVPQPPGASKNASPATSYDSGEESHAAAASPTSVLRSFPPSAVVATAVTANKKQPPPPPLVVRETDESVDVFGCSFSDDGGFAGELPPLYTDFDLLADFPEPPLDFLSNLPVEPFSLAPFSGNNGSPDLHLDDAPSPAAAQVDDFFQDITDLFQIPVV</aaseq>

Gene Sequence

<dnaseqindica>1..411#4172..4834#ATGGAGGAGGAGGGGTTTGTGGCTCTCAAGAGGACGGAGCATGTCGAGGTGACGTCCTTGGCGGTGGCGGTCGAGGCGACGCCGTCGGCGAAGGGGGGAAAGGGGAAGGTTGTGGTGGGTGGTGGTGGCGCCGGCGGCGGCGTTGGGCCGACGAGGGTGAGGGTGTTCTGTGATGACTTCGACGCGACGGACTCGTCGAGCGATGAGGATGAGGAGGAGGAGGTGACCGCGCGGCGGAGGGTGAAGCGCTACGTGCAGGAGATTCGGTTACAGCGCGCGGCGGCGGTGGCCGTGCCGCCGGTGAAGGTGAAGGGCGAGGAGGTGTTCCCGGCCGCGGTGTCGGCGAAGATGGCGGAGGCCGCGAAGGCGAGGGTGGTGTTGGCGCCTGGGAGGAAGAGGAAGGCCGGCGGGGTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACATTGAATATATCGACAATTTCCAAGGTGTCATGTGCTGTAATCGTGCTTAGATTATTCCTCGTGGCTCTTTTACTAACCTGGAATCAAGTTCGGGAGCTTGGATGTCAATTTCAAGTTAACTACTGTGAACTGGTGAAGTGAAGGTCCTTCATGTGCGCCTTAATTGGTTTGTGCATTCCCATGCGAACCAAGGCTAAAAATGGTTTTGTTATTAGTACTGCATCCCAAGAAGCTTGTAGTGAAGCTGCTACCACTGATCACGAATCGCCTTCTCTCATGCATTTCCATAGTATTGCTCACTACTACAAAAAATCAGACATTCAGACTTTACAAGTCTCTAGGAGAAGAGTGGTGCTGGACAGGCCTTGGTCCAAATGATTAAGATTTGATGAGGCCTTGTAAGACCAAAGGAACATTTATTGAGATTATAAAACATGCATTTTGCGAAAATAAGCAGCGTTGTTTATTGGCCGTTCTGGATGGATGACAAGTGGATTCTAAAAAAAAACAATTGCTATTATGAACACCAGCTGATGTTAATTCTTAATTGGCGAAGACCCAGAGTGAGATAGTATAAACGTAGTACTCCCTCCGTCCAAAAAAAAATACAACTATACAAGAATACTCCCTCCGTCCAAAAAAAGACAAACCCTAGGTTTTCGTGCTCAATGTTTGACTGTTCGTCTTATATGAAATTTTTTTATAATTAGTATTTTTATTGTTGTTAGATGATAAAACATGATTAATATTTTATGCGTGACTTATCTTTTTAATTTATTTTTATAATTTTTTTAAATAAAACGGACGGTCAAATGTTGAACATGGAAACCCAGGGTTTGTATTTTTTTTTGGGACGGAGGGAGTACAGTATATGCTTTGTTGTTGAACAGGACAGAGCCAGTGCATGCATGCATGGTCAGTCAGGTCATCAGGTGGAGCCTGAAAAGATCCTACCAACCGAGTGATCACAGAGAGTAGCTTAGCTTAGCTTAGCTTGGTGAGCTAAAGCCAAGATTAAACAAACGCAAGGTAACAAGGGGGAAGAGGCTAAACGCGCAGGGGCAAGCAAAGCCACGCAGGAACATCTAGGGGGCGGTGATCCATTGACCCTGTCGCTAATGCCGCGCGCGCGCCTTGCTGCCCCGCTTTAGCTTATTAGCACTAGCGTGGTGGCGAGCCTAAGCTCTACGGGCCTAATTCTGCCCGCGCGCACGGGCGCCGAGAGCGTGCACGCTGCCTGGACAAGCCCCGGCTTTGGACGCGCCCACTGCACGCACACGCTGACACTGCATGCATGCTCTTCACCTTGCATATGCGTACACTGTATATATGAGTATAGCTCACTAGCTAGCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAACAAAACAAAAAGAAACCTTATCAACGGGAAAACCGCGGGGGTAAAAACCGAGAGGAAGGAAGGAAACTTCAGATACGGGTGTTTCGTACACGTCAGCGTCACAAGACAGGCACGGGAGGAGGAAGAGGGGGAGGCAGATGGGATGGGGAAGGAAGGAAGGATGGTGGGTGAATTTTTTTTTCTGTGAAATTTTTTACCGCACCGATCGAGGAGCCCGGCCCGCGGCCGAAAAACTATTTGCTTCCGTACCACAGTCGCCTGCAGTGTTACAGCAGGGTAACATGGGCCAGTATAGCCAAAGTAGTGTAAAAAAACTGTTAAAATTAGCGGCCCCTCTCACATGGGGGTTGGCTCGTCGCCGATCATCTACCGTGCCGTGTCCCCGGTGACTCACCTACAGCTGTGGAGAATGCCAAAAGAAAAAAAAAAGTTACTGTAGTGGAGACAGTGATGCAAGGGAGCAGCAAGGTGGCCGCTGTTTTTTTTCTTGAGCAGCAAGGGGCGCGATGTGGCCGACGTGTGGGCCCCGGCGGGTATTTTTACCGCGCAAACGCGCGGGCACCGAGGTCGTCTCGGGGAGTAAATTTTTAAGTACATGGGTATCGGTGAATAATGTTGTCGATCCACATATGGTTACCGTGAGCTGGTAGTACTACAAACTCGAATCTGACCGGGCACGCTTCGCCAGGCCGGCCGCGCGCCGCTCGCCTCGCCGTGTCGGTCTTTCAACGTTTGCCGTGGGTAGGGCCCACATGACAGTCACATACCCTCACCGGCCGAGATCTTTTTTACCTTCCAAAAATATTGACGGGTCATCCTTTAGCTTATTCAACGAATAAGGTAAATGGTATATATACAAATGAAAAATAATTTATAAATAAAACTTTTATACATGTGTCCTTATCGATTTAAAAACACCTACGATTAAAAAACATCAAAATCAATTGAATAATTAAGGTAAAAAAATAAATTTGAGCTTATCTCTACTATTATAAAAATTGAAGATGTTTTTGCTGATACTTTAGTACGTCATCCGTGTATGAGTCAGTTTTTAAGTTCACTTTTAGAAATACACACACACACACACACATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGAGTCGGTTTATAACTTCGTTAACTTTTAGAAATACAAAATTCGTCATATAAGAAATCTCATTAAAAAAACCTCGCATGCTAACTTGAGATGATCCTAACTGCAGCTCATGATTTTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGAAGTACGCGGCGGAGATCCGCGACCCGTGGAGGCGGGTGCGGGTGTGGCTCGGCACGTTCGACACCGCCGAGGAGGCCGCCAAGGTGTACGACACGGCGGCCATCCAGCTACGCGGCCGCGACGCCACCACCAACTTCAACCAGTCCGGGGACTCGGCAAGCCTCGACGTCCCACCCGAGGTCGCCGAGCGCGTCCCGCAGCCGCCGGGGGCGTCCAAGAACGCCTCCCCGGCCACCTCCTACGACTCCGGCGAGGAATCCCACGCCGCGGCGGCCTCCCCAACCTCCGTCCTCCGTTCCTTCCCTCCCTCCGCCGTCGTCGCGACCGCCGTCACGGCCAACAAGAAGCAGCCGCCGCCGCCGCCTCTCGTCGTCCGCGAGACCGACGAGTCGGTCGACGTCTTCGGCTGCTCCTTCTCCGACGACGGCGGCTTCGCCGGCGAGCTCCCACCTCTCTACACCGACTTCGACCTCCTCGCTGACTTCCCGGAGCCCCCGCTGGACTTCTTGTCCAACCTCCCCGTGGAGCCCTTCTCCCTGGCTCCCTTCTCCGGCAACAATGGGTCACCGGACCTCCACCTCGACGACGCCCCATCGCCGGCGGCGGCACAAGTGGACGACTTCTTCCAAGACATCACCGACCTGTTCCAGATCCCCGTCGTCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003032