BGIOSGA003048

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Revision as of 10:45, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003048| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA003048, complete gene.| tag = P0452F1...")
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Gene Name

BGIOSGA003048

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003048, complete gene.

LocusTag

P0452F10.8

Ensembl Transcript ID

BGIOSGA003048-TA

Ensembl Protein ID

BGIOSGA003048-PA

Length

2899

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:7512767..7515665

Sequence Coding Region

7512767..7512819,7512946..7512972,7513098..7513197,7514676..7514822,7514908..7514988
,7515075..7515220,7515596..7515665

Genome Context

<gbrowseImage1> name=IndicaChromosome01:7512767..7515665 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:7512767..7515665 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCGCGCAGGCGAATGCTCCTCAAGGTCATCATCCTCGGTGACAGCGGGGTCGGGAAGACGTCTCTGATGAACCAGTACGTGAACAAGAAGTTCAGCAATCAGTACAAAGCGACGATCGGCGCGGATTTCCTGACCAAGGAGGTGCAGATCGACGACCGGCTCTTCACATTGCAGATTTGGGACACAGCGGGACAGGAGCGATTTCAGAGTCTTGGTGTGGCATTTTACCGGGGAGCTGACTGCTGTGTTCTTGTATATGATGTCAATGTTACCAAGTCATTTGAAAGGCTCAACAGCTGGCGTGAGGAATTCCTAATTCAAGCTAGCCCATCAGATCCAGAGAATTTCCCTTTTGTTGTACTTGGAAACAAAATTGATGTTGATGGTGGTAATAGCCGGACTGTTTCTGAGAAGAAAGCTAAAGCTTGGTGTGCTTCTAAGGGAAACATCCCTTATTTTGAGACATCTGCTAAAGAAGGCTTCAACGTGGAGGCTGCTTTTGAGTGTATAGCAAGGAATGCTATCAAGAATGAACCGGAAGAGGAGATATATCTTCCTGATACAATTGATGTTGGAGGTGCTGGAAGGCAACAGCGCTCGTCAGGCTGTGAATGCTAG</cdnaseq>

Protein Sequence

<aaseq>MASRRRMLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVLGNKIDVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIARNAIKNEPEEEIYLPDTIDVGGAGRQQRSSGCEC</aaseq>

Gene Sequence

<dnaseqindica>1..53#180..206#332..431#1910..2056#2142..2222#2309..2454#2830..2899#ATGGCGTCGCGCAGGCGAATGCTCCTCAAGGTCATCATCCTCGGTGACAGCGGGTGCGAAAAAGCAAAAAAAAATCCCCCACCTTTTCGTTCAATTTCTACTGGGGGATATTCTTTCTGGGCGAAATTTATTCTGTTTCTCTGATCGCTGATGCGTCTCTTTTTTTTTCTCGTTGGCAGGGTCGGGAAGACGTCTCTGATGAACCAGTAAGATCAAGGGGGCGCAATCTTGCGTTGTCCGATTCGTCAAATTTGAGGGTTTTTTTAGGCGTTGTTTGAAGGGGGACTTCGCGATGTTGAATGATTTGGGTGATTTTGTTTTTGTTGTTCAGGTACGTGAACAAGAAGTTCAGCAATCAGTACAAAGCGACGATCGGCGCGGATTTCCTGACCAAGGAGGTGCAGATCGACGACCGGCTCTTCACATTGCAGGTTCGGTCTAATCTGCTTTCCCAGAATCACTTCGCAGCTTCATCGCAGCTGGATTTTGGTGCGCGGTGATAGTTTGTTTTGGGGGGATTATTGGGGTGCTTAGATCTTTGCAGATAAGTAGGGGAATTGGGGATTAGGGCGTGATGCACATGCACCGTTGACTGATTGGTCTACTAGACAACAATGGATTCAGATAATATTGGGGGAACAGTAAAATCGTTTTGCTCAAAAGAAAAAATATTTTGCTTGTGACAGTTAGAGTTTAGGTTTCATGTAATTATTTTGCTTGGTACTCTTGTTTTATTTTAGTGTGAGATGTGAGATACCTGTGCAACCATCATGTAATTGCTTATTGGAGACGTTAATGAGATCACAAAAGATGTAAAACACAAATATGACAGAAGGGATAGAGCGGTTACTAGAAAATTGTTTTTATTCCACTCTATTTACGCAGTTTGGAAGCCATATTGCATAGCTCCTTTCATAAGCTACAATGAGGATTATGTTACGATTGCATAAGTACATCAAGTTATATCTAGTTCAGTACTGCATTTTCGGTTGCTGGTTGTACAATGGTACAATCTCTCAGGGATGATGTTTTCTTAGCACGGTATTGCTTCCTAATGTAAGTTACTAGTGCTAGTGTCTGGGATTCTGTACCACCTGTATCAGGGATTCTTTATTACTTTTTATTGTTTGTGCAAGAACTGCAGTTGGATGGGACAATAAGTTGTACCTTACGTCTCCTCCCTGGTTGTCTGACAATGTGTTGTTCCCCTCGTGAAAAGCGAGTACTATTCTGTTCTATTCCCTCTATCCCAAAATATAAGGACTTCTAGATTTTTTCTCTTGAGAGAGATTAATGATGAAGGGAAAAGACTATGATGCTCCTCATTAAATGTTGGGTGATTGGGGAGTGGGAAGGTGGTTTGGGGTAAAATTGGGTGAAAATTAAATGAGCGTTAGTTGGTGGGAGAAGTAGTACTATGGAAGTCCTTATATTTTGAGACAAATTTCAAACGCTTGAAGATATATTGGGACAGAGGGAGTAGTAAATATTATATTACATTATTAATTGGCAAATGCTTTTCTAAGACAAAATCAACTGCAGTAGAGAATCATCTTGACTATGTGGAACTAATGATACCCTCACTTTACAGCAAGTTGGAGAAAATATCCACACCCATAATGCTCTTTGATAGTAGTCCATCAGTGCCAAAAATTATATTCACTTTCCCACATTTATTGGAACAAAGACTGTAGTTTTCGATTTGTATCTAACTCGTAAATCAGCAAAGTAACTCCAACGTTTGCTGTTATAGCTCAATACCTGATAATTATTACCAATATCTGCTGGTTTAAGTGTTATAAATCATAGAAATACTAGAATGTATGGCAATCAAAGTAGTACCTTGTCATTTGTCAAACAGTAATTCTGTCTACATTTACGCTAATACTTGTGTTTACCTGGAACTTAGATTTGGGACACAGCGGGACAGGAGCGATTTCAGAGTCTTGGTGTGGCATTTTACCGGGGAGCTGACTGCTGTGTTCTTGTATATGATGTCAATGTTACCAAGTCATTTGAAAGGCTCAACAGCTGGCGTGAGGAATTCCTAATTCAAGTAAGTAGCTTACTTATCGATTACCCAAAATTCCAAATGTACTGCAATCTGTTTATTGAAAGTTGAATCATTATTCTCAATGCAGGCTAGCCCATCAGATCCAGAGAATTTCCCTTTTGTTGTACTTGGAAACAAAATTGATGTTGATGGTGGTAATAGCCGGACTGTGAGTATTTGTCCTCATAGAACTGCCTTTAGCCTCTGATTTCCTGATTTGCATTGTGCTTTTCTTAACCTAGTTGTTCTTCCCAGGTTTCTGAGAAGAAAGCTAAAGCTTGGTGTGCTTCTAAGGGAAACATCCCTTATTTTGAGACATCTGCTAAAGAAGGCTTCAACGTGGAGGCTGCTTTTGAGTGTATAGCAAGGAATGCTATCAAGAATGAACCGGAAGAGGAGATGTAAGTTAATTATTGCCCTGTTTGAATCTGATGAAGATGAAGATTTAAGTACGCACATGTAAAACGAGAAAGCCATTAGCACATGATTAATTAAGTTTTAATTATTTTAAACTTGAAAAATTGGATTTATTTGATATTCAGAGCAACTTCTATATAAAAAGATTTCGCATGAAATATACTGTTTAGCAGTTTGAAAAGCGTTGCTAATGGAAATCGAGGTAAAATTTGTATCTTGCAGCCTCCCAGTAGAAACATCAATTTAAAAAAAACTCAATTCTTTTTCCTGATAAGGGGAGCATTTAGAAGTACTAACGCAGAGATGAACTACGAAGTGCAAACCATGCCGTTCAATGACACTTTGCTATAATTTTGTAGATATCTTCCTGATACAATTGATGTTGGAGGTGCTGGAAGGCAACAGCGCTCGTCAGGCTGTGAATGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003048