BGIOSGA003071

From RiceWiki
Revision as of 10:46, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003071| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA003071, complete gene.| tag = P0431F0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA003071

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003071, complete gene.

LocusTag

P0431F01.20

Ensembl Transcript ID

BGIOSGA003071-TA

Ensembl Protein ID

BGIOSGA003071-PA

Length

1955

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:7812816..7814770

Sequence Coding Region

7812816..7813160,7813219..7813944,7814086..7814143,7814571..7814770

Genome Context

<gbrowseImage1> name=IndicaChromosome01:7812816..7814770 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:7812816..7814770 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCAATGCCATCATCATCAGCAGCATAGCAATGGCCAGCAGCTGCAGAGGCTGGAGGGCATTGAGGAAGAAGGCGGCGCCGCCGAGAAGTGGCCGCCGCCGACGACTGTCCGGCCGCCGGAGACGCCGACGGAGACGATGGAGTTCTTGGCGAGGTCGTGGAGCCTGTCGGCCGCCGAGATCTCCAAGGCCCTCAGGGTCCTCAGCGGCAAGGGCGTCTCCGACGACGTCCACGACGCCGCCGCCGCCGTCGCCGGCGACAGGAAGGAGCGGAGGTCACCGGTGACCATGGACGGCCGCCGCCATGAACAGGCAAGCGAGGAGAACGTGGCAGCATCTATGAGAGCGGACGCGTCGTCAATGGCGGCGGCGGCGCAGGGCGGCGCGATGAGCCCGCCCATCTCTCCCCGTGCCAACCTGGACGTGAAGCTTCTCCGGGCGACGGCTACGGCTGCGGCGGCGGCGGGAGGGAGAGGCGGAGGCGGCAAGACGACGATGGGCACGTGGATCAAGGAGCAGAAGGAGCGGAAGCGCGCCGAGGCGAGGTCGCGCAACGCGCAGGCCTACGCGGCGACGTCCGTGGCCGGCGTCTCCGCCGCGGTGGCCGCGCTGTTCGCCGGCGCGGTGTTCTCCCCTCCTCCGGACCACCCCAAGAACGTCGGCGCCGCCGCACCCGCACCGGCACCCGCACACGCCGCCGGAGCGGCAGGCGCGAAGACGGCGGCGGCCATCGCGTCCGCCGCCGCGCTGGTGGCGTCGCACTGCGTGGAGATGGCGCAGGCGATCGGCGCCAGCCACGACCAGATCCTCGGCGCCATCCAGTCCGCCGTGAACGCGCAGACCAGCGGCGACATCATGGCGCTCACCGCCGGCGCCGCCACGGCCCTGCGCGGGGCGGCGATGCTGCGGGCGAGGCTCCACAAGGAGATCCAGGCCGCCGCCCTCCCCGGCGGCGGCGCCGGCGCCGGCGACATCAGCGGCAGGGAGCCCGAGAGGGACACGTCGCCATTCGCCTTCGTCTCCAGAGGCGGCGAGCTTCTCAAGCGCACAAGACAAGGCACGATAACAGTGATCATCAAGATGAGGAGCGCGCATATGGCCGGCACCTTCATCAAGACCAAGAAATTTGTTGTGCTTGACATCTGCTCGGAGATCCCGGCGTGGGCGGGGAGGGAGGTGGAGGAGGGGAGCCACAGGAGGGGATACTTCGGGATCAAGACGGTGGAGAGGATGATCGAGTTCGAGTGCAGGAGCAAATACGAGCAGCACAAGTGGGTTCAAGGGATCACCGAGATGCTCAACCGCCGTCACACCATGAAAAATTAG</cdnaseq>

Protein Sequence

<aaseq>MEQCHHHQQHSNGQQLQRLEGIEEEGGAAEKWPPPTTVRPPETPTETMEFLARSWSLSAAEISKALRVLSGKGVSDDVHDAAAAVAGDRKERRSPVTMDGRRHEQASEENVAASMRADASSMAAAAQGGAMSPPISPRANLDVKLLRATATAAAAAGGRGGGGKTTMGTWIKEQKERKRAEARSRNAQAYAATSVAGVSAAVAALFAGAVFSPPPDHPKNVGAAAPAPAPAHAAGAAGAKTAAAIASAAALVASHCVEMAQAIGASHDQILGAIQSAVNAQTSGDIMALTAGAATALRGAAMLRARLHKEIQAAALPGGGAGAGDISGREPERDTSPFAFVSRGGELLKRTRQGTITVIIKMRSAHMAGTFIKTKKFVVLDICSEIPAWAGREVEEGSHRRGYFGIKTVERMIEFECRSKYEQHKWVQGITEMLNRRHTMKN</aaseq>

Gene Sequence

<dnaseqindica>1..345#404..1129#1271..1328#1756..1955#ATGGAGCAATGCCATCATCATCAGCAGCATAGCAATGGCCAGCAGCTGCAGAGGCTGGAGGGCATTGAGGAAGAAGGCGGCGCCGCCGAGAAGTGGCCGCCGCCGACGACTGTCCGGCCGCCGGAGACGCCGACGGAGACGATGGAGTTCTTGGCGAGGTCGTGGAGCCTGTCGGCCGCCGAGATCTCCAAGGCCCTCAGGGTCCTCAGCGGCAAGGGCGTCTCCGACGACGTCCACGACGCCGCCGCCGCCGTCGCCGGCGACAGGAAGGAGCGGAGGTCACCGGTGACCATGGACGGCCGCCGCCATGAACAGGCAAGCGAGGAGAACGTGGCAGCATCTATGGTGAAAGAATTATGAATCATCAGGTGACGTGACGTGCTGTGTGGTGCATGGCATGCAGAGAGCGGACGCGTCGTCAATGGCGGCGGCGGCGCAGGGCGGCGCGATGAGCCCGCCCATCTCTCCCCGTGCCAACCTGGACGTGAAGCTTCTCCGGGCGACGGCTACGGCTGCGGCGGCGGCGGGAGGGAGAGGCGGAGGCGGCAAGACGACGATGGGCACGTGGATCAAGGAGCAGAAGGAGCGGAAGCGCGCCGAGGCGAGGTCGCGCAACGCGCAGGCCTACGCGGCGACGTCCGTGGCCGGCGTCTCCGCCGCGGTGGCCGCGCTGTTCGCCGGCGCGGTGTTCTCCCCTCCTCCGGACCACCCCAAGAACGTCGGCGCCGCCGCACCCGCACCGGCACCCGCACACGCCGCCGGAGCGGCAGGCGCGAAGACGGCGGCGGCCATCGCGTCCGCCGCCGCGCTGGTGGCGTCGCACTGCGTGGAGATGGCGCAGGCGATCGGCGCCAGCCACGACCAGATCCTCGGCGCCATCCAGTCCGCCGTGAACGCGCAGACCAGCGGCGACATCATGGCGCTCACCGCCGGCGCCGCCACGGCCCTGCGCGGGGCGGCGATGCTGCGGGCGAGGCTCCACAAGGAGATCCAGGCCGCCGCCCTCCCCGGCGGCGGCGCCGGCGCCGGCGACATCAGCGGCAGGGAGCCCGAGAGGGACACGTCGCCATTCGCCTTCGTCTCCAGAGGCGGCGAGCTTCTCAAGCGCACAAGACAAGGCACGATAACAGTACAAATTCTCCCAAAAAAGAGCTTAAACTTTCAGAGATTTTTCACCAAAATCCAATCCAAATAACACTCCCATACGCGTCAAATTGCAGGCATACTACACTGGAAATTGGTCACCGTCTACATGAACTCCAACCTGCAGGTGATCATCAAGATGAGGAGCGCGCATATGGCCGGCACCTTCATCAAGACCAAGAAATGTAAGATCAAACTAAACACCATGATCGGAAATGGATTTTAATCAATCGAGGAAATATTTATTCCTCCATGTTGCATGTTATCCAAATATATCATAAAAAAATTTAAAAAATTGATAAGATATATTAATATTTAATAATATATAATATAACTTTACAAACATGCTTTAAAAAATAACAAATTTAACAGTAATTTATATACATGTGCACATAGTCATATTTGTTTTGCTTTTTAAAATTTAAACTCAAATGTTTGTTGAGTGATATATCACATACTAATTTATCTGTTATTTTTTTTACTTATTTGAATAACATGTAAATAAACGAGAGGATCTTTCTTCGAGAGATTAAAAGTGTTTGCGATCATATCCTCATTTGCTCTCACCAAGATTGATACGATGATTCATGTGTGTTTGCAAATTATTTGCAGTTGTTGTGCTTGACATCTGCTCGGAGATCCCGGCGTGGGCGGGGAGGGAGGTGGAGGAGGGGAGCCACAGGAGGGGATACTTCGGGATCAAGACGGTGGAGAGGATGATCGAGTTCGAGTGCAGGAGCAAATACGAGCAGCACAAGTGGGTTCAAGGGATCACCGAGATGCTCAACCGCCGTCACACCATGAAAAATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003071