Os11g0462100

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Revision as of 09:10, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0462100| Description = Glycoside hydrolase, family 18 protein| Version = NM_001074396.1 GI:115485440 GeneID:4350476| Length = 1639 bp| Def...")
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Gene Name

Os11g0462100

Description

Glycoside hydrolase, family 18 protein

Version

NM_001074396.1 GI:115485440 GeneID:4350476

Length

1639 bp

Definition

Oryza sativa Japonica Group Os11g0462100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:17591136..17592774

Sequence Coding Region

17591263..17592439,17592514..17592692

Expression

GEO Profiles:Os11g0462100

Genome Context

<gbrowseImage1> name=NC_008404:17591136..17592774 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:17591136..17592774 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcaggcacgcgttggctcagccatgatcttcctactcctcgctttcctgtcagaggtttctgcatccatatcgcagcagcagcagcagcaatgcggtggtgcatcgtctgcaggagtgagagctggcttctggctgccatcctcgagccactactcgcctctcggcagcatcgacacctcgctgtacagccatctctactacagctcgctctccatcgacgagacccgctgcgccgtcgcgccgccgtcctccggtgaagagagctccattctttccaatttctcgagcagcatcaagtcctccggtgggggtttcgctgtcaagaccatcttgtccattggcacggatgagttcagggaggatgtgtccaatgccgccttctccaggatggcctcggagaagaaccttcggagagcgttcatcaactcgtcgatcgaattggctcgtgccaatggcttcgatggcctcgacttggcgtggaggtttcccgcaacgcagctggacatggagaacctcggagatcttctcgcggaatggcgagccgagatcatggaggattcgacgaccagatcgaccgagcctctcctgctgacggctactgtttacttctcgaaccacctgttcggcatggccgacactaacctcaactacccgatagacgacatgtcgagcagcctcgattgggtgaacattatcacgttcagcctgcacaagaacagcaacgtcaccacggctgacgcgcctctctacgacaaggattctcacttctcggctagctatggtgtcatctcgtggctggatgcagggctccctccatgcaagcttgtgatggggatacctctgtttggaaggtcttggttcctcagaaacaaggacaagaacgggctaggagcaccaactgcagctgctggaacaaagcagagaaagagcaaccagatcggcgtaatcgcgtacgcagagatcgaagagtacctgaagtctcagagtgtttttgttactcatgacaaccagtcagtggcagactacttctacagcggtgatctctgggtcagcttcgacagtgccgtggttgtgcaggagaaggtggagtttgtggcgaagtctcagttgcttgggtacttcctctcgaccatcagctttgatgactcaaactacacattgtccaagcaagcatcacagtcctggaatcaatatcatgtttcttcatatgcgcaaggtagttttggaattatgcaagaaggagctataatccaagatctgcatgcatcaacagggtcaccaagtagttggtattcaaaaactctcagctacttgttattgtcaataatacttgtattggaggttctataa</cdnaseq>

Protein Sequence

<aaseq>MEQARVGSAMIFLLLAFLSEVSASISQQQQQQCGGASSAGVRAG FWLPSSSHYSPLGSIDTSLYSHLYYSSLSIDETRCAVAPPSSGEESSILSNFSSSIKS SGGGFAVKTILSIGTDEFREDVSNAAFSRMASEKNLRRAFINSSIELARANGFDGLDL AWRFPATQLDMENLGDLLAEWRAEIMEDSTTRSTEPLLLTATVYFSNHLFGMADTNLN YPIDDMSSSLDWVNIITFSLHKNSNVTTADAPLYDKDSHFSASYGVISWLDAGLPPCK LVMGIPLFGRSWFLRNKDKNGLGAPTAAAGTKQRKSNQIGVIAYAEIEEYLKSQSVFV THDNQSVADYFYSGDLWVSFDSAVVVQEKVEFVAKSQLLGYFLSTISFDDSNYTLSKQ ASQSWNQYHVSSYAQGSFGIMQEGAIIQDLHASTGSPSSWYSKTLSYLLLSIILVLEV L</aaseq>

Gene Sequence

<dnaseqindica>128..1304#1379..1557#aagattcttcattcttgttctcctccccctctcctaacccctgcttcagcaaggagatgctcaccttctccacttcatcctcatcacagccacattgcattcgcaaccactccaccatctctcgccgatggagcaggcacgcgttggctcagccatgatcttcctactcctcgctttcctgtcagaggtttctgcatccatatcgcagcagcagcagcagcaatgcggtggtgcatcgtctgcaggagtgagagctggcttctggctgccatcctcgagccactactcgcctctcggcagcatcgacacctcgctgtacagccatctctactacagctcgctctccatcgacgagacccgctgcgccgtcgcgccgccgtcctccggtgaagagagctccattctttccaatttctcgagcagcatcaagtcctccggtgggggtttcgctgtcaagaccatcttgtccattggcacggatgagttcagggaggatgtgtccaatgccgccttctccaggatggcctcggagaagaaccttcggagagcgttcatcaactcgtcgatcgaattggctcgtgccaatggcttcgatggcctcgacttggcgtggaggtttcccgcaacgcagctggacatggagaacctcggagatcttctcgcggaatggcgagccgagatcatggaggattcgacgaccagatcgaccgagcctctcctgctgacggctactgtttacttctcgaaccacctgttcggcatggccgacactaacctcaactacccgatagacgacatgtcgagcagcctcgattgggtgaacattatcacgttcagcctgcacaagaacagcaacgtcaccacggctgacgcgcctctctacgacaaggattctcacttctcggctagctatggtgtcatctcgtggctggatgcagggctccctccatgcaagcttgtgatggggatacctctgtttggaaggtcttggttcctcagaaacaaggacaagaacgggctaggagcaccaactgcagctgctggaacaaagcagagaaagagcaaccagatcggcgtaatcgcgtacgcagagatcgaagagtacctgaagtctcagagtgtttttgttactcatgacaaccagtcagtggcagactacttctacagcggtgatctctgggtcagcttcgacagtgccgtggttgtgcaggagaaggtggagtttgtggcgaagtctcagttgcttgggtacttcctctcgaccatcagctttgatgactcaaactacacattgtccaagcaaggttagtgattgtcaaattctcatcacagatgtaattaaatgcctcagctaatccttccaaattttgtaatgcagcatcacagtcctggaatcaatatcatgtttcttcatatgcgcaaggtagttttggaattatgcaagaaggagctataatccaagatctgcatgcatcaacagggtcaccaagtagttggtattcaaaaactctcagctacttgttattgtcaataatacttgtattggaggttctataataccaagaacagccgtaatttgtaaacaggccagattgcacaaatagtttcagatgataaggcttataacactacatttatg</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0462100, RefSeq:Os11g0462100