BGIOSGA003102

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Revision as of 10:46, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003102| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA003102, complete gene.| tag = OS01G02...")
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Gene Name

BGIOSGA003102

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003102, complete gene.

LocusTag

OS01G0238900

Ensembl Transcript ID

BGIOSGA003102-TA

Ensembl Protein ID

BGIOSGA003102-PA

Length

6317

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:8316803..8323119

Sequence Coding Region

8316803..8316868,8317566..8317655,8317736..8317847,8318551..8318578,8318773..8318871
,8319222..8319291,8319373..8319407,8319503..8319577,8319662..8319757
,8319984..8320047,8320650..8320703,8320879..8320964,8321405..8321465
,8321561..8321625,8321860..8321965,8322747..8322835,8322957..8323119

Genome Context

<gbrowseImage1> name=IndicaChromosome01:8316803..8323119 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:8316803..8323119 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGGGTGAAGGTGATATCGCGCTCCACCGACGAGTTCACGCGGGAGCGCAGCCAGGACCTGCAGAAAGTATTCCGCAATTATGATCCAGCACTTCGTTCTCAGGAGAAAGCGGTTGAATACACCAGGGCTCTTAATGCTGCGAAGTTAGAGAAGATATTTGCTAGGCCATTTATTGGAGCAATGGATGGCCATGTTGATGCTGTATCATGCATGGCGAAAAACCCCAATTATTTGAAAGCAATATTTTCTGGCTCAATGGATGGGGATATTCGTCTGTGGGACATTGCTGCAAGGAAGACAGTCTGCCAGTTCCCTGGACATCAGGGTGCTGTGAGGGGTTTGGCGACATCTACTGATGGTGATCTTCTAGTATCATGTGGTGTTGACTGCACTGTTCGACTATGGAAAGTCCCTATGCTCAAGATGGTAGACACTAACGATGCTATTGGAGATGCTTCTCAGCCTTCAGCGGTCTACACCTGGAAGCATGCGTTTTGGGGTGTTGACCACCAGTGGGATGGCAATCTTTTTGCAACTGTAGGTGCTCAGGTTGATATATGGGATCAAAACAGGTCAGAGCCAATAAATAGCTTTGAATGGGGTAAAGATACAGTTCTGTCCGTGAGATTTAATCCTGGAGAACCTGATGTTCTAATTACATCAGCTAGTGATCGGAGTATAACACTTTATGATCTACGCATGTCATCCCCTGCTAGAAAGCTAATCATGAAGACAAGGTGCAACTCAATATGCTGGAACCCTAGGGAGCCTATGAACTTCACTGCCGCAAATGAAGATACAAATTGCTATTCCTTTGATGCTAGAAAGCTTGATGAAGCCAAAGTTGTTCACAAGGGCCATGTTTCAGCAGTGATGGACATTGATTATTCACCAACAGGGCGTGAATTTGTTACGGGTTCCTACGATAGAACAGTGCGGATCTTCCAATATAATGGTGATCATAGCAGGGAGATATACCATACTAAGAGGATGCAAAGGGTGTTTTGTGTGAAATACACCTATGATGGAACCTATTTGGTTTCTGGCAGTGATGATACGAATCTTCGGCTGTGGAAGTCCAAAGCTTCAGAACAGTTGGGAGTTCTTCTTCCAAGAGAACGCAGAAAACAAGAATACCTAGATGCTGTCAAGGAGCGGTATAAGCACCTTCCCGAAGTCAAGCGGATTGTGAGGCATAGGCACTTACCTAAGCCAATCTACAAGGCGGCCAACTTAAGGCGAACAATGATTGAAGCAGAAAACCGTAAAGAAGAAAGGAGGCGTGCGCACAGTGCCCCCGGGAGCATGCCTGTGCAGCCCTTCAGGAAGAGAAGAATAATCAAAGAAGTAGAGTAA</cdnaseq>

Protein Sequence

<aaseq>MRVKVISRSTDEFTRERSQDLQKVFRNYDPALRSQEKAVEYTRALNAAKLEKIFARPFIGAMDGHVDAVSCMAKNPNYLKAIFSGSMDGDIRLWDIAARKTVCQFPGHQGAVRGLATSTDGDLLVSCGVDCTVRLWKVPMLKMVDTNDAIGDASQPSAVYTWKHAFWGVDHQWDGNLFATVGAQVDIWDQNRSEPINSFEWGKDTVLSVRFNPGEPDVLITSASDRSITLYDLRMSSPARKLIMKTRCNSICWNPREPMNFTAANEDTNCYSFDARKLDEAKVVHKGHVSAVMDIDYSPTGREFVTGSYDRTVRIFQYNGDHSREIYHTKRMQRVFCVKYTYDGTYLVSGSDDTNLRLWKSKASEQLGVLLPRERRKQEYLDAVKERYKHLPEVKRIVRHRHLPKPIYKAANLRRTMIEAENRKEERRRAHSAPGSMPVQPFRKRRIIKEVE</aaseq>

Gene Sequence

<dnaseqindica>1..66#764..853#934..1045#1749..1776#1971..2069#2420..2489#2571..2605#2701..2775#2860..2955#3182..3245#3848..3901#4077..4162#4603..4663#4759..4823#5058..5163#5945..6033#6155..6317#ATGAGGGTGAAGGTGATATCGCGCTCCACCGACGAGTTCACGCGGGAGCGCAGCCAGGACCTGCAGGTGCGTCGCGTCCTCGCTTCCGCTTCCCCTTGGCTGCTTCATGTTGCTGTTTATAGGTTTTGATTGGTAGCAGTGATGACTTCGTTGGTTTGCTCCCTCGCGAGAGCGCGATGTAGTCTCCATGCTTTAGTTCTATGATATGGAGCTTTGTTGTTGCAATCAGCTCGTAGGTTCTGAAGCACCGAGTTTGTTTGCACTCGAGGACGAATGAGTGGTACAAATATATGCCTAGTCAATTTGGTGTAGCTGCGAAGTTTCTAGGGGCTAATTTTTATCCCCTTTTGCTGGGATTGTGTTGATTTTCTTGAATTCATCGGTTGACATGTGGTATATATCGATGCATAAGAGCCACTGCAGAGTTCCCTTTTTCTAGTTTGGTTCTAGCTAAGGTTAACAGAAGAGCTTTGTTTCAAATGTCTGGACAGAGTATTGGTTGGAGAGATGTCTCATTGTTGCTTTGCATTCTAGGTTAATATAGTAGATATCTACCGTCCATTTTTTAGTCAAGCGATTTACATAATTATGAAGTTAGGTTTTGAATCCTTATTTTTTCCTGAAATATACACCGAGTTTTTGAATGCTATGGCCAACACTAGGTTCAGGTCATTGAAAGTTTGTCTGGTCACTTGCTTAGGCCAATATGATTACTCTGGTTCCAGCCACTGACATTTTCTATCTCATTTGTTGCTCCCAACAGAAAGTATTCCGCAATTATGATCCAGCACTTCGTTCTCAGGAGAAAGCGGTTGAATACACCAGGGCTCTTAATGCTGCGAAGTTAGAGAAGGTTTGTGTGTCATTTCTTCTCTGTGTTTTTTTTCTTTCATAGTACAGATTTTGACGTGAACTTTGCTGCTCTGGTTTCAGATATTTGCTAGGCCATTTATTGGAGCAATGGATGGCCATGTTGATGCTGTATCATGCATGGCGAAAAACCCCAATTATTTGAAAGCAATATTTTCTGGCTCAATGGATGGGGGTAATTACCATACTTCTGTACTAGGATGCTGCTTTTGTCTCCTGATGTTCTTCTGCATTCTTATTTGCGCCTTTGATAAAGTAGTACAATCAATGCAGCCATAACATGCAGACCTTCAGTTTTCTGTCTTTTGAGCCTGGGGGTGATACTCACATCAGATGTTTTGTCTGAGTACATTTGCATAGCTAGTTATAGTTACTAACTCTTGTCTTCTGATGCACTTAGAAACTATATTATGAACCTGAACATTTGTTTGCATTTCCTGAGTACGATGCACTTAGAAACTATATTATGAACCTGAACATTTGTTTGCATTTCCTGAGTACTTAGTTGATTGATAAAGACAATATCGGTATTACAAGTGAACTGCTATTCGTGTGCATTAATTGTATCTGATGATGCATGCAGGCAGTTTATATAATCGTTATATTATCAGGAACTGATGTTTATGACATAACAGCAGTGTGCATTTGTGTTGTCATTTTTACAAGTATAATTTGGTTGTATTATGTTTCAGTACTGTACATGCTGTGGCCATTTTATGTAACTTTAGAAACTGGAACCGTTTTTGGTTCACTTCCTGCTATGTCGAAGCAGATGATTTTAATTCATTTATTCAGAACAAAGTGACAATCATGCACTGCTTTATCATAGTTACATTTGGATCTGAAATGGTTAACTGTAGCTTCTGTTTTGCTGGCAGATATTCGTCTGTGGGACATTGCTGCAAGGTACTAATATAACAGTGGTGATACTCTCGCCAGAGGATCATCCTTTTTTATTATGTACAAACTCGTGGCACCTGTTTGTCCCTACGGGGTGGAGATAACATCTATGCATATCCTTGTCCATATTGCTAGCTAGAGCAGTTCTTAATTATGTCACTTACAAATGTCATTTTCTTTTTGTTGACTAACAAAAACAGGAAGACAGTCTGCCAGTTCCCTGGACATCAGGGTGCTGTGAGGGGTTTGGCGACATCTACTGATGGTGATCTTCTAGTATCATGTGGTGTTGACTGCACGTAAGTTAAATTTGTGGTTGTCTTATGAAATAATCTTATTTCCAACTCAGTCTTAGTTAGAGTACTGAAACTCTGAACCTAAACTGCCACAAGCTTAACCCCAACTAAACAACTCTTTTTTACACGTTTACTTATATGGTTTAGGACCCATTTGTACTAATAAAGTAAGAAGCTTACGGTGCCTTGCATATAACATTTACACTGGTTACACATGTATTGAATGAAACTGTGGCTCTAATATTAATTTTACTTCATTTAAATCAACCTTCTCAATGTATGAAGTAAAAAAGATGTAATTGCGGAATACCGGCTGTCTGTTCTTACTGTGTGCACTTATCCATCCATTGCAGTGTTCGACTATGGAAAGTCCCTATGCTCAAGATGGTAGACACTAACGATGCTATTGGAGATGCTTCTCAGGTATACACTGAATGCACACGTCTAGATTCTTTTGTCTTATCCTGGGTATATCTTATTTGATTAACTTGCTACTGTTTATAGCCTTCAGCGGTCTACACCTGGAAGCATGCGTTTTGGTAAGAGTGTGCTTTGTTATGTTCCAGATTTATTTGAAACTATAGCCTGTAGGTTCCCAGGTTGATCACCAGGTTTCTTTTTTCATTATTTTTAGGGGTGTTGACCACCAGTGGGATGGCAATCTTTTTGCAACTGTAGGTGCTCAGGTTGATATATGGGATCAAAACAGGTAGAATATTTGAGGATTCACTTGCAGCAGTTTATCCTTTCGTTTGAGTCGTCGCCAGCACTGACACTTTCATCATTTGTATAGGTCAGAGCCAATAAATAGCTTTGAATGGGGTAAAGATACAGTTCTGTCCGTGAGATTTAATCCTGGAGAACCTGATGTTCTAATTACATCAGCTAGGTAAGTTTAGTTATTTAGGATAAATAACTGATGACTAATTATTTTAAAATTCATGTTCTCCTTTTGACTCATCCAATTATGTGGACATTTTTTTAAATTTCTTGCTCAATGACCTTGATGCCAGTTTTGGTCAATCCTATTTCTTGGCTGTGAATATTATCATTTATTGTTTTGCCTCTCAAAAAACTTCTTAACACGGTAATGTGGGATGATATCAATTTTGCAGTGATCGGAGTATAACACTTTATGATCTACGCATGTCATCCCCTGCTAGAAAGCTAATCATGAAGGTTTGTTGAATTCTATTTTATTTGTGGATGCTTGGCAGACCTTAAAATTTCAAAACCGATACATGTAACATATGGACATTGTTGATTCTGTCATGCAGAAAAAGTTTACTCTGTTCTCATAGACAACTACAAGGTGTCTGTGATAGCTAGTAGTTGATATTGTCTCCCTCCAATGTTTTCTGCTGTAGTTACTGCATCATTTATTCACTTCCAAGTCAAAAATATAAGTGAAAACAATTATCTTATGAAGAGAAAATTCCTTTTCCACTTGAAAATGGACGGGCTCTAAAAATAGCTACTACCTCCATCCAAAATATAAGACTTTTATGGTTGGGCATGGGTATCAGGAAGGGCATGGGTATTAAGGAAGTAGGTGGAATTAAATGGGGGAAGATATATGATTGGTTGAGAAGAGGAAGTATGTGGAGAAATTAAATGGGGGAAGGTTGTAATTGGTTGAGAAGAGAATGTAGGTGGAGAAGTTGCTAGATTTTGAGACGGAGGGAGTACTGTTTTCCCTTTAATTTTTTCTGCGGGTGCCAGCTTGCTATTTGAGTAGCTGCAGAACCATCAAGAAGCTAATGCAACTTTTGCTTATGCAGACAAGGTGCAACTCAATATGCTGGAACCCTAGGGAGCCTATGAACTTCACTGCCGTAAGATTTATTTGTTTCCTGTATATGGTGCTGACTGTCGAATGAATTATTTGAACTGTATGCTATAGTTCTGGAGCTTACCTGTCAAGCTTTCCTTACAAATAGTGCAAGCCTAAACTATGTTTTGGTCTTTTTATCATCTAGTAACATCTATCCTGATACTTTTTCTTGCTAGGCAAATGAAGATACAAATTGCTATTCCTTTGATGCTAGAAAGCTTGATGAAGCCAAAGTTGTTCACAAGGGCCATGTTTCAGCAGTGTAAGTAGCATTTGGATTTTGGAACCTTTTTTTTTATACCCTGTTTTCTTTAAAATAGATATATTTGCAAATATTGATCCCTTGTAAAGAAAAAAAGTTAGTAGATATATCTGCAAAGACTGATTCCTTGGTAAAGAAAAAAAGGTCAATTTGCCCATTTATTTTGTTGGGTGTTAACTAAGCATATTATAAGTTCTAAACTCATAAACCAACGCAATTTTCTACAAATATGAGAAATGCATACATATATGGCATGGCATCAATATGCTATCGAGGATCTTGGCGGAAGGTTTGTGTGTGAAATCCAGTCCTCCGCAAAAGATTCTATAAGTATCAAACACATGCAGAGTTAATATCCCATGCAATTTCCCATTATATCCTGCATCTTTTGCTACTCTTCTTGATTCTGGGAAGTCATTTTACATGAACGTTCTTCACAGGATGGACATTGATTATTCACCAACAGGGCGTGAATTTGTTACGGGTTCCTACGATAGAACAGTACGTGGACTCTCGAAGATACTATAGTGACCTTACATTCTAGACATGTATTGGTGATTTTGCATTAACAACTTTGTTGTCAATGCTTCTGGCAGGTGCGGATCTTCCAATATAATGGTGATCATAGCAGGGAGATATACCATACTAAGAGGATGCAAAGGTTCTTTTCCATTATTTTATTGGCATTCTAGCTTTAACTGATGCTGCTTTCTAAGATCAAACATCAGAGTGTTCTCAACCTAATGGACAACAAGATCAAATATAATATTTCACCTTCAAATGCTTATATAGCTGACACTTGTTACCTGTCAGACTGTTATCTTATTGAACACGGCTTTATGGGGTTTCCATGGCATCAGTCCTGTCTAAATCATTTTACCTCTTATCTTTGCAGGGTGTTTTGTGTGAAATACACCTATGATGGAACCTATTTGGTTTCTGGCAGTGATGATACGAATCTTCGGCTGTGGAAGTCCAAAGCTTCAGAACAGTTGGGAGTTGTAAGTTTCTAACACCATCTTCTGTTTGCCACTTTGGCTTACTTGCTCATATATCTTGTGATTTGCACTCACCCTCTTGCTACAAATTGGAAGCTAATTTGGACAAGAAACTCTGTTTCTCACTGTTGAATGTAGATGCTTAACAAAGTAAACATATCAACAGCCATTTGTTTTTCACTTGCTTTTAATTGCTTTTCTGTGCTATTATCATACACTGCCATTAGATCAAGTGTTGTGCTGAATTAAAAATAATGGATAACCACCAGAAAAATGTTGGCATATATACATGGCCAGTGAGAGAAAAAGGAGACAAGCAATCTGCGATGAATGATTAAGTGCTGCTAGGTGCTAGTGGTGTTCTTAGGTGCCAGAGTGGTCTTGTGAGATGCTAGCATACATTAGCATAGACTAGGTGAACATAGAGCTCGTGCAAAGCAACATGAGAATGCCCGATCCACTGCAATTTGGAACTCAGTGAATGCTCTTCTGTTTCAGTAGAATTTACTGTGCAAGTCTGCCTTGAATGCTTGAACTTTGATGATTATTAACATGAGCTGTGTCTTATTCTTAGAAAAGGCTGTACCACTCGGTACCTTGTTTACATGTTCTTTCTGTTAGTTCATGAACAATTGTTACCATACCCATTGTTTTGCTGTCCTTTTTTTCCAATGTGCACAGGTCTTATTGTCATCGAACAAAGCAACTGATATATTGCGCATTATTGTTTCATGTTTGTACTTTATTTCATAATATTTTCTAATGCATTATTGTCCTTTTGCAGCTTCTTCCAAGAGAACGCAGAAAACAAGAATACCTAGATGCTGTCAAGGAGCGGTATAAGCACCTTCCCGAAGTCAAGCGGATTGTGAGGTAATATAACCGCCTCTTGACGTGGGGAAGTTCCACGTACTTTGTATAGATCATCTCGTTTACAATCCCCATACTTTTACTATCATTTTGTTGATGTTGCATGGATGGCGTTTCGCTGCAGGCATAGGCACTTACCTAAGCCAATCTACAAGGCGGCCAACTTAAGGCGAACAATGATTGAAGCAGAAAACCGTAAAGAAGAAAGGAGGCGTGCGCACAGTGCCCCCGGGAGCATGCCTGTGCAGCCCTTCAGGAAGAGAAGAATAATCAAAGAAGTAGAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003102