BGIOSGA003193

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Revision as of 10:47, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003193| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA003193, complete gene.| tag = P0699D1...")
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Gene Name

BGIOSGA003193

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003193, complete gene.

LocusTag

P0699D11.23

Ensembl Transcript ID

BGIOSGA003193-TA

Ensembl Protein ID

BGIOSGA003193-PA

Length

3226

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:9642212..9645437

Sequence Coding Region

9642212..9642542,9644351..9644382,9644508..9645437

Genome Context

<gbrowseImage1> name=IndicaChromosome01:9642212..9645437 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:9642212..9645437 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGAGCTAATTGCTGTATAGCTGCAAAAGAGAGGCCTCAGCCATGTGTTACTCCAATTGAAGTGTCAGCATTCAGGAACGTAAGACACTCTCCATCATGGAGCTTCCGGTGGGATAACCGCACACACATAGAAGACATAATGGAAATGCCCGCATTGTTTTCCAACCATAGTAGTGGAAGCATTCGGCCTGAAACAAAGAGTGGCTCAATTGCGCCAACTGATGGCTTTTCTAACGGAGGCAGCCCTTCTGATATGTTCAACAAGCTCAAGTGCCATAAATCTGACAGGAAGAGGGAGTCATCTAAGATTGCGAGATCTGACCTTCGAGGTAGATCCACCACAAGCAATTCTTCCCCTGAGGCAAAGCTTTCCAGAAAATCGCTAGACACAGTAAGTGTGGCTTCAGATTCGAAGATGTCAATCTCTGTTCCTTCAACGCCGCCTGCTATATCCAGAGCAGATCCTTCATCATCCTCCAGGGGGCATTCTCTACCAACAGATGCAGATTCAATGAGGAAAGCACGTCGATCACCAGGGTATCAACTGTATAGACAGGTCTCCGACAGCAAGATTCCATCTCTCAGGTCTCTCAACGAGGGCGCCTCTCCTGAAGGAAGGCCATCCTCCTCCATGCTCTCAGTCTGCAGCAACGATTTATCTGCAGTAGGATCACATGGCGAGTCATCTGATGGTTGGTCAATGCGAACATTTTCTGAAATGGTCGCATCATCTCAGAGAGAGAGATGGTCAGTTGATAGTGAGCTCTTAGGTTCTGTTTCGAGTAAAATGACAAGATCAAATGCTTCTAATAATCCTACTACACATTCACCTGACCAAGAGGTGTGCAAGCTATGTTTAAAGCTATTAAAGGAACGGTCCACATGGAATGCTCAGGAACTGGCTGTTGTTGCTGTTTTATTGTGCGGCCATGTTTACCATGCTGACTGTTTGGATAGCTTAACTGCAGAAGCTGACAAATATGATCCCCCTTGTCCTGTATGCACCCATGGTGAGAAATGTACAGTGAAGCTATTTGGGAAGTTGGAATCAAAGACAAAGAACAAGATACCTAAAAATGTGATAGTTGATGTTAATCTAGATGGGAGCTCTAAGCATCAGAAGGGAAGTAGGAGAGAGCCCAGATTAGGCACAAGTTCTAGCTTGAAGGGCTCGTTTAGTCGCCCGTTTTTGAGAAGGCATTTCTCTATTGGCTCTCGGCCATCCCAGTCAATTTCAGAGAGCGAGTCTGCCAGAAAGAAGGGCTTCTGGGCAAGGCACTGGAGGGAATAG</cdnaseq>

Protein Sequence

<aaseq>MGANCCIAAKERPQPCVTPIEVSAFRNVRHSPSWSFRWDNRTHIEDIMEMPALFSNHSSGSIRPETKSGSIAPTDGFSNGGSPSDMFNKLKCHKSDRKRESSKIARSDLRGRSTTSNSSPEAKLSRKSLDTVSVASDSKMSISVPSTPPAISRADPSSSSRGHSLPTDADSMRKARRSPGYQLYRQVSDSKIPSLRSLNEGASPEGRPSSSMLSVCSNDLSAVGSHGESSDGWSMRTFSEMVASSQRERWSVDSELLGSVSSKMTRSNASNNPTTHSPDQEVCKLCLKLLKERSTWNAQELAVVAVLLCGHVYHADCLDSLTAEADKYDPPCPVCTHGEKCTVKLFGKLESKTKNKIPKNVIVDVNLDGSSKHQKGSRREPRLGTSSSLKGSFSRPFLRRHFSIGSRPSQSISESESARKKGFWARHWRE</aaseq>

Gene Sequence

<dnaseqindica>1..331#2140..2171#2297..3226#ATGGGAGCTAATTGCTGTATAGCTGCAAAAGAGAGGCCTCAGCCATGTGTTACTCCAATTGAAGTGTCAGCATTCAGGAACGTAAGACACTCTCCATCATGGAGCTTCCGGTGGGATAACCGCACACACATAGAAGACATAATGGAAATGCCCGCATTGTTTTCCAACCATAGTAGTGGAAGCATTCGGCCTGAAACAAAGAGTGGCTCAATTGCGCCAACTGATGGCTTTTCTAACGGAGGCAGCCCTTCTGATATGTTCAACAAGCTCAAGTGCCATAAATCTGACAGGAAGAGGGAGTCATCTAAGATTGCGAGATCTGACCTTCGAGGTAATTTATAAATTGTTCCTATATTCTTTCATTCTTTTATGTTTCTTTATGCATTCCTTCACCTGATTAAAGAATGGGATTCAACATTTCAACTTTGATGTTCTTCATAACAAAGTTATTGAACCTACATGGTCATGATTACCATTTAGGACAACAGAATGATGCCCTTGTTCACTAATGCTGTTGAATGCAACCATAAAGAGTGAAGAACTGAGGCAACAAAAAATATATATTCCATTTGTTTTGTTTTGAACATAAACAATTTGTTTTGTGATGTTTTCTTTCTGAATTAGCACTTTGATTTAACATGTCATTTACTTCTGAATCCTTGCACCTATGTTTATTCGATGCATTTGCACTCTCTTCCAGAGCTAGTAGAATAAAGTTGACTTGTTTAATTTGCTTTACCAACATATTTATTACACAACTTCCAACGGAAGATAAGCTACCACCTGTACCATAATATAAAATTGGAAAGGAAAACTGGGGAATATTGCCAAATTCAATGCTCTTGACCTTCCCAACTGATATTCAAATGCAATATAATTCTAGATGCATACATGATGCTCAATTTATCTTTGATTATGAAGAAAGGGTGCAAAAGAAATGTTGTTGGTCCTGCTCAGGATCTGCTTTAATTTAGATATTATTTTTGCACATTTCCCCATGAATCTGGAATTTGCATTCCCTTTGACCAGTTTAGCATCCTAATTGATCTTAGATTCTGTTTCCACCCAGAGCAGCTTATCTCACTCCATTTTTTGCTATTTGGCATTGCCTTATGTGCGTTTGTTCATAGGATTATCGAAATAAATTTTAGGCTCTAGTTTTTGGTGCTCATTGCTGGAACCTTCTACTGTCTCTGAAGGTGGATTGGTATATAACCATATAACATTCACATCGCACTTTTTTTGGCATGGTTTTTGTGGGGAGCATCCTTTACCCAAGGGAACTTTATTGGCTTGTAATATTTCATTTCTTTGTAACCAAGGTTCGAAAACGTAACCATCTTGTTACTATTCCAAAGCTTTTTGACTGGTACTGGTGCAAACCAGCCTGAATACTTGAAATTTAAAAATTGAACTTTAGAAATTTGTTGATCTGTTATAGCCACAATTTTTTTTCCTGGCAGTTGCAGTAACAATTATCCGGCGGTAACTATTATTTTACTTCAACTTTCGATTTGAATTCCTTTCATCCAGTAAACTTGTAACCTACTTATCTGGCCCCGGAAACCAGCACTTCTGTGAATACCGATTTCTGAAACCGTGTTCATATGTCAATATCTCAGTGAACTACCTGCCTTGCCTAGTCTGGAATTGTTATTTCGAATATGAACTACCTATTAATACATAGATCTACCTTTAGGCTGTGTTCGGCTCTACCTGTTCCCATCCTTCCCTCTTTTGTTTGCTGTGCGCATGCTTCCCAAACTGTTAAAGGGTGCAATTTTTTGCAAAAAAAAAATTTCTATAGGAAAGTTGCTTTAAATTTATTATTAATCTATTTTTAAAGTTTTTTAAGCTAATATTTAATTAATCATGCGCTTTAATTAATCATGTGCTAAAGAGACGCTATGTTTTCCGTGCTAAAAAGAAGCGTTCCGAACTGGCTGGTTCGAATGCAGCCTTAGTCTATATTCAGTGATAATTCATCGACCATACTTTTAACTTATGTGCCAGGCTGTAAGATAGATTTTATCATCCTTATGCAGAAGACAATAGTCTTCAGCACAGGAGGAGTTTTTGCCTCAGCAGCTATTTGCTGACAATTCCCTTGCTGATTTCTTCTACTTTTTTTTTCAGCAGGTAGATCCACCACAAGCAATTCTTCCCCTGAGGTATGCAATACTAATCTATATAGCTGAAACCTGAAATTATTAGCTGTTACCATTTAAGTTTTATGTACCTTGGAAGATTGAAATGTGCTGTTTCTGATAGGTTTCTTCTTCAACATATTTTGTAGGCAAAGCTTTCCAGAAAATCGCTAGACACAGTAAGTGTGGCTTCAGATTCGAAGATGTCAATCTCTGTTCCTTCAACGCCGCCTGCTATATCCAGAGCAGATCCTTCATCATCCTCCAGGGGGCATTCTCTACCAACAGATGCAGATTCAATGAGGAAAGCACGTCGATCACCAGGGTATCAACTGTATAGACAGGTCTCCGACAGCAAGATTCCATCTCTCAGGTCTCTCAACGAGGGCGCCTCTCCTGAAGGAAGGCCATCCTCCTCCATGCTCTCAGTCTGCAGCAACGATTTATCTGCAGTAGGATCACATGGCGAGTCATCTGATGGTTGGTCAATGCGAACATTTTCTGAAATGGTCGCATCATCTCAGAGAGAGAGATGGTCAGTTGATAGTGAGCTCTTAGGTTCTGTTTCGAGTAAAATGACAAGATCAAATGCTTCTAATAATCCTACTACACATTCACCTGACCAAGAGGTGTGCAAGCTATGTTTAAAGCTATTAAAGGAACGGTCCACATGGAATGCTCAGGAACTGGCTGTTGTTGCTGTTTTATTGTGCGGCCATGTTTACCATGCTGACTGTTTGGATAGCTTAACTGCAGAAGCTGACAAATATGATCCCCCTTGTCCTGTATGCACCCATGGTGAGAAATGTACAGTGAAGCTATTTGGGAAGTTGGAATCAAAGACAAAGAACAAGATACCTAAAAATGTGATAGTTGATGTTAATCTAGATGGGAGCTCTAAGCATCAGAAGGGAAGTAGGAGAGAGCCCAGATTAGGCACAAGTTCTAGCTTGAAGGGCTCGTTTAGTCGCCCGTTTTTGAGAAGGCATTTCTCTATTGGCTCTCGGCCATCCCAGTCAATTTCAGAGAGCGAGTCTGCCAGAAAGAAGGGCTTCTGGGCAAGGCACTGGAGGGAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003193