BGIOSGA003194

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Revision as of 10:47, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003194| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA003194, complete gene.| tag = P0699D1...")
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Gene Name

BGIOSGA003194

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003194, complete gene.

LocusTag

P0699D11.27-2

Ensembl Transcript ID

BGIOSGA003194-TA

Ensembl Protein ID

BGIOSGA003194-PA

Length

3338

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:9658455..9661792

Sequence Coding Region

9658455..9658606,9658729..9658873,9659035..9659072,9659214..9659292,9659389..9659467
,9660250..9660289,9660367..9660501,9660813..9660950,9661507..9661792

Genome Context

<gbrowseImage1> name=IndicaChromosome01:9658455..9661792 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:9658455..9661792 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTCTTCCACGAGGCGTCCGCTCCCCCAAGCCGATGGCCGCCGCCGCCGCCTCCGCCTCGCCGCCGCAGCCGAGGCCCGGGCACATGCTCGTGCTCGGCACCGGCTTCGTCGGCCGCTACGTCTCCCAGCGCCTCCTCGCGCAAGGATGGAGGGTGTCCGGGACGTGCACCAGCCCTGCCAAGAAGACGGAGCTCGAGATGCTGGGCATGGATGCTTCGGTCTTCGATGCCACAAGCAGCAGGTGCTGCTTCTTCTTCTTCTTCTTGCTCTTCTTGTTCTTTGTTCCTTCCGAGTCTGACAAATCTCCGGTTCTTGTTCTTGTTCCTTTTAGTCTGACAAATCTCCGGTCTTTGCAAGATGCAACTCATTTGCTCATCTCCATTCCACCCATCCCGGGAATTGGTGATCCTTTGCTTTCTTCACATTCCAACCTGCAAACTACACTAAGCAATAGTAACCTTCAATGGCTATGTTACCTTTCTTCAACAAGTGTGTATGGTGATTGTGGTGGTGCATGGGTTGATGAGGATCATACGGTGAATCCGAAGACTGAGTCTGTGAAATTAAGATATGCTGCCGAAAAAGGATGGTTGAATGTTATAGATGACTTAGATCTATCAGCCTTTGTATTTCGTTTAGGTGGAATATATGGGCCAGGAAGAAGTGCAGTGGACACAATAGCCAAGAGCAAATCTTTGTCACGAAGACAGAAATCGAGGGAATCCAAACAGTACACTGCACGAATTCATGTGGCTGACATTTGTCAGGCTATCCTGGCTAGCATGAGCATCAGAAGTGCAAGGAGGATATACAACGTAGTGGATGACGACCCTGCCCCAAGATCTGAGGTTTTCGCATTTGCTCGGAGCTTGGTTGAGAGGAAGCATCCTGGCCTGATAATGGATTCTGTAGTACTACCAGCTACTCAGGACAGAATCGTAGCTGCTGAGAAGCGGGTCTCTAATGCTCGGCTAAAAGAGGAACTTGGTGTAAAGCTTCTTCACCCAACTTATAAATCAGGCCTGCAGAGCATTTTGGATTCTTGGAGTGTCGAATCTTCTTTTTCAAATAGGAATGTTGACGTTTAG</cdnaseq>

Protein Sequence

<aaseq>MALPRGVRSPKPMAAAAASASPPQPRPGHMLVLGTGFVGRYVSQRLLAQGWRVSGTCTSPAKKTELEMLGMDASVFDATSSRCCFFFFFLLFLFFVPSESDKSPVLVLVPFSLTNLRSLQDATHLLISIPPIPGIGDPLLSSHSNLQTTLSNSNLQWLCYLSSTSVYGDCGGAWVDEDHTVNPKTESVKLRYAAEKGWLNVIDDLDLSAFVFRLGGIYGPGRSAVDTIAKSKSLSRRQKSRESKQYTARIHVADICQAILASMSIRSARRIYNVVDDDPAPRSEVFAFARSLVERKHPGLIMDSVVLPATQDRIVAAEKRVSNARLKEELGVKLLHPTYKSGLQSILDSWSVESSFSNRNVDV</aaseq>

Gene Sequence

<dnaseqindica>1..152#275..419#581..618#760..838#935..1013#1796..1835#1913..2047#2359..2496#3053..3338#ATGGCTCTTCCACGAGGCGTCCGCTCCCCCAAGCCGATGGCCGCCGCCGCCGCCTCCGCCTCGCCGCCGCAGCCGAGGCCCGGGCACATGCTCGTGCTCGGCACCGGCTTCGTCGGCCGCTACGTCTCCCAGCGCCTCCTCGCGCAAGGATGGTCAGCTACTTACTTCCCCTGCTCCTCCATTTTGGATCGGATTCTGCTGCTATTGCCGCCGTACGTTTCTCCTAACGGTCAATCACGATTTTGCGGCTGGATTCATTGATTGGTGGATGCAGGAGGGTGTCCGGGACGTGCACCAGCCCTGCCAAGAAGACGGAGCTCGAGATGCTGGGCATGGATGCTTCGGTCTTCGATGCCACAAGCAGCAGGTGCTGCTTCTTCTTCTTCTTCTTGCTCTTCTTGTTCTTTGTTCCTTCCGAGGTTAGATGCACAATAGTAATTGCAAATCCTTTGCGCCGATGTGATGTCTGCCATCCCTCATTGTTGTTCAGCATGCGTTGCTACATTTTTGTGTTCCTGCACATGATTTGTTGTGTTTCGAATCCGTTTACATGATTGCTGATGTCTATGTCAATTTACAGTCTGACAAATCTCCGGTTCTTGTTCTTGTTCCTTTTAGGTTCGATGCACAACTCTTGTGCTGATATGATGTCTACCATCTCTCATTTGTTCAGCATGTGTTGCCAATTTGTTTGTGTTTCTGTGCATTGTTATGTTTCAAATGAGTTTACATGATTGCTGATGTCTATGTCAATTACAGTCTGACAAATCTCCGGTCTTTGCAAGATGCAACTCATTTGCTCATCTCCATTCCACCCATCCCGGGAATTGGTGATCCTGTACGTTCTCAATTGCTTGTTGATGTCAGTTCGATTGACTTAAATTCCATCTAAATTTAACATAATAATGATTAAATTTGCATCTAATATCTACAGTTGCTTTCTTCACATTCCAACCTGCAAACTACACTAAGCAATAGTAACCTTCAATGGCTATGTTACCTTTCTTCAACAAGTAAGTGCACATATGCTCATCTGATCATCTCTAGTATGACCTGCATAATTTCAATTCGTCCTTCAACTGTAGCAACATCTTTTTTATGTTAGTTTTCTAAACACGCATAATATCTGCTTCTCGTTCCATTAACATAGAAGAGAAGTTGGTGGTGTGGGCTTTTTTGGTGGTATGGGCACAACACAGCAACCAAACTACATGGCTAGTGGACTGCTGTTTCTAGGGAAGAAAACAAACAACCGTTACCTAGCTAACACAGAAAGGACTACTTGAGTAAACTAGATAAGCAACCATATCCTGCCTAGTTCACTACCTAAGAGATATTGAGCTAGTAAAATGTTGCACGTTTGCTGCCAAACATACGGCTATTCTCTCCTTCCTTGGTCACCAGGATGACACAGGTGCTGGAACCTTTTATGTACCAAGCATACCAATGACCAATGTGGAATCAAGAATGAGTTTATCCAGACTGGGATTCCTCCCTGGACTTGTGAACTGACCCCTGCATTGCACCAAGGTGTGAGTAATTGTCACCTGCAATGGCTTGCAGAAATTGTTTTTTCCTTGGTTCAATGCTCGATTCGATCTGAGGTACATCAGGCAACAACACCATTTTCATGGCAAACAATGCATCATACTCACATCTCTTATAAAATCCTAGCTAGCATTCAAAAGTCGATACCAACTTTTCAGGTTAACTGAACGTATCATAAATGTGCAAACTAGCCCTGAAAAATTTTTCTGCCATACAATAACTTGTAATTATTATTATCATTTTTCAGGTGTGTATGGTGATTGTGGTGGTGCATGGGTTGATGAGGAGTAAGATAAGTGGCTTTCTGTAAGTGCTTCTGCAATAATTGTTTAACTGAATGCTGAAGAATCTGCTATTCATGCAGTCATACGGTGAATCCGAAGACTGAGTCTGTGAAATTAAGATATGCTGCCGAAAAAGGATGGTTGAATGTTATAGATGACTTAGATCTATCAGCCTTTGTATTTCGTTTAGGTGGAATATATGGGCCAGGAAGAAGGTTTCAGTCTGCTAAAATTTCAATCCATTTTATTTTGTAGTCTTTGAACCAAAAGTTATATTTACTCCAGAACTGCATGACTTGGCTACTGAAATTCTGAATCCCACCAATAAAATCAACCTTTTAAAATTAAAGATTTGGAGCACTTTTTATCTGATTTCAACCAATACGGTGTACAACTTGTGCTACAAACATGTCAAGTATGTAATGGATGAAAATGAGAACTTTTTCATGGGAGGCTTTTGTTACAGTTCCCAATACTTGCTTTCTAAAAGTGCCACTATTATGACCCTTTGTGTTGATTATTGCAGTGCAGTGGACACAATAGCCAAGAGCAAATCTTTGTCACGAAGACAGAAATCGAGGGAATCCAAACAGTACACTGCACGAATTCATGTGGCTGACATTTGTCAGGCTATCCTGGCTAGCATGAGCATCAGAAGTGCAAGGTTTGTTTGTTTATTTTTTATTTTTTACTTCAGGTCTTCAAAACGGCTGCTACTTTTCCAGTTTTTCTGCCTTCAATCATATTTTCAAACTAGTTTGAATCTTCCTTAGTATTACCTTGTGCGACTCTCACAAGAACAAATTATGAGACTGCACTGCCAAAAGAGACTCACTTTGGCTGTATATCTGTCCACAGCACAGAACCATTTTCATAATCACTTTTCCACAAAATATTCAGGTATCATAAATTTCTATGTAGTAGCAACCACTGTTTTTATTAGTAAAATACTGTATCTGAGTATAACCACTTTGGGTACAATATTTGGTTGTGGTGTTGTATACCATCAAACCAAGAACTAAAATCAGGTCCTGATACTGATAGTGTTACTCCCTTTGTAATCCCAGTAACCTATTTACGTACTGTACCTTTCTACTGGACCTTTGAAGGTTGATTTTTTTTTGAACTAGGAGAGCATGAGCTCCCCCATTTCCATTAGAAGAAACAACCTTTGAAGGTTGATAACTGATTCCATGTATGCGTGGCAACTTTATTTCAAGGAGGATATACAACGTAGTGGATGACGACCCTGCCCCAAGATCTGAGGTTTTCGCATTTGCTCGGAGCTTGGTTGAGAGGAAGCATCCTGGCCTGATAATGGATTCTGTAGTACTACCAGCTACTCAGGACAGAATCGTAGCTGCTGAGAAGCGGGTCTCTAATGCTCGGCTAAAAGAGGAACTTGGTGTAAAGCTTCTTCACCCAACTTATAAATCAGGCCTGCAGAGCATTTTGGATTCTTGGAGTGTCGAATCTTCTTTTTCAAATAGGAATGTTGACGTTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003194