BGIOSGA003198

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Revision as of 10:47, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003198| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA003198, complete gene.| tag = OS01G02...")
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Gene Name

BGIOSGA003198

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003198, complete gene.

LocusTag

OS01G0262700

Ensembl Transcript ID

BGIOSGA003198-TA

Ensembl Protein ID

BGIOSGA003198-PA

Length

6583

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:9727150..9733732

Sequence Coding Region

9727150..9727213,9727736..9727839,9727937..9727975,9728101..9728163,9728620..9728694
,9729712..9729777,9729881..9729923,9730066..9730114,9730864..9730957
,9731043..9731095,9731887..9731971,9732208..9732310,9732387..9732479
,9732951..9733017,9733275..9733341,9733429..9733482,9733598..9733732

Genome Context

<gbrowseImage1> name=IndicaChromosome01:9727150..9733732 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:9727150..9733732 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTTGGCAGGCTGGGAAACATTGGCTTCCTGTCCTGCGAGTGTCATTCATTCGTTGATCAAAGTGTTATTAGTGGTTACCTTCATGCAGTGGCCAGCCACTGCTATCGTTGTTGTTCCGAATTCAAACTGTTTTACCTTCGACAACAATAGCCGCCTTGTGGACTTTGCAGATCTAATCGGGAAGAACTTTGAATATAATGAAAAGGGCTCAGTACCTTCTGATTTGGTTGTCCAGTTCTGCAAAGATGTGCAGAGAAGATCTCAAGCGGGATATACGGACTTTGGACGTTTTATCAGTTCTCGCTCTTTTATAACTGGTTCACAGCCTATTGACTTTATTCAGACATTCCAATATGGAGATCTAGTGCACTGTGAAACTACTTTTGAGAAGATGGGCCGCACATCACAGGTAAACATCATATGCGGTCAATGCCCAAATAAAGAATGCAAAGGCAAACAAGGATGCATCTGTAGTATATCTTATGATGAACTGATGTGCAGGGTGACTGTTGAACTTGCTATCCCATGTCCTAAAAGTGGTCCAAGAGTATTTAAGGGTTTCACTGTCGGATTCCATCCCCGGTCATCAGAGTTGGTTTATAATGGATTGACTCAACTGGGATTTGAGCAATCTCATCATGAGTTCAGCTTTCAGGGTGAGCAGAGTCATGTATCCCTGTATCTTAGTGCAGTGTTTTCACTCTCAGGACTTGTTGGAAAACCTTCCTTGAAGGTTAATCCAGTTAAAGGGCTTGATGTGACACTGACAGGATCAGGGACCAACGGTGCTATGCCTACTACCCTGTCCCCTACAATTCTGAATGTGATCTGGAGATGTGAAATCGCGCGGAGCAGTCCTTATGAGGTCAACATTTTGATTCCAGTAGAAGGCTATGATCCAATTGAATTTACGCTCACCAAAGAATGTGTTCATATACAAGAAAAAGAGAGTAATCCAATGAGAGGCTGGGCAACATTTGGGATTATTTCTTGCATCTTCATTGTGTTGTCAAGTCTACTTTGTTGTGGAGGTTTCATCTACAAAACACGTGTCCAACATCAGTCTGGTTTATATGCGCTGCCTGGGATGACCATCCTGTCTGCCTTCCTAGATGCGGTTGGTGGACCAAGCTACATGAGAGCAGATGATCATGGCGGAAACCATGCAAGCCAAGCATCATGGGAACGCATGCCTGGTACCTCACAAGCAGCAGAGCATGGCACCAAAGATAGGAGATACGGATCACTTTGA</cdnaseq>

Protein Sequence

<aaseq>MLAGWETLASCPASVIHSLIKVLLVVTFMQWPATAIVVVPNSNCFTFDNNSRLVDFADLIGKNFEYNEKGSVPSDLVVQFCKDVQRRSQAGYTDFGRFISSRSFITGSQPIDFIQTFQYGDLVHCETTFEKMGRTSQVNIICGQCPNKECKGKQGCICSISYDELMCRVTVELAIPCPKSGPRVFKGFTVGFHPRSSELVYNGLTQLGFEQSHHEFSFQGEQSHVSLYLSAVFSLSGLVGKPSLKVNPVKGLDVTLTGSGTNGAMPTTLSPTILNVIWRCEIARSSPYEVNILIPVEGYDPIEFTLTKECVHIQEKESNPMRGWATFGIISCIFIVLSSLLCCGGFIYKTRVQHQSGLYALPGMTILSAFLDAVGGPSYMRADDHGGNHASQASWERMPGTSQAAEHGTKDRRYGSL</aaseq>

Gene Sequence

<dnaseqindica>1..64#587..690#788..826#952..1014#1471..1545#2563..2628#2732..2774#2917..2965#3715..3808#3894..3946#4738..4822#5059..5161#5238..5330#5802..5868#6126..6192#6280..6333#6449..6583#ATGTTGGCAGGCTGGGAAACATTGGCTTCCTGTCCTGCGAGTGTCATTCATTCGTTGATCAAAGGTACTATTATGCATCTTATGCTTTTGAAAGAACTATGTAAGTGTCTACTTTACTTTTGAAATTTATGGACTGTTTTGTGCGGTCTACCTTGCCTCCAAACTAGGCTTTCCTGTTAGAAGTCTGAAGCCAACTTCCAAAATGAAATGGGTGTGGGGAAATTGAAAGGTTCTTGGTGTGTAGAAAGCCTAGTGCAATGTGAGGTTAAGTTCTGCTGAAGACAAAAATCCAATTGACTGAAGAAACATGTAACTGGAAGTATTTCTTGAAGTATACATTGCATATTAGTGTTCTGAAAAACTTTATGCAACAGCCATTTCTTGTTTGATAATTCACAAAATTATATGTTTAATACACACCACAAAATTCTAATTTCCACACATACATTTCCTTTCCTACACTTACTTTCATTTTGTTAACACACGTGTTTGTGTTTGTGTCAACTGAAGTCTGACATTAGTTGTTGTTAACCAATGATAGTTATTGGTTGTGGCAGTTCTTTATAATTTTTGTTTCATTCTACAGTGTTATTAGTGGTTACCTTCATGCAGTGGCCAGCCACTGCTATCGTTGTTGTTCCGAATTCAAACTGTTTTACCTTCGACAACAATAGCCGCCTTGTGGACTTTGTATCCTTGTTCCATTTATTGTGATATTCACTTATATATTTGAAAATTGAAACAACATCAAATTCTTTCGAATTGTTGTCTCCTAACCTGCTGCCAGGCAGATCTAATCGGGAAGAACTTTGAATATAATGAAAAGGTGATTACCAGAAATTATCTACAAGATGCTGAATATTCTTCTAGCCTACTTACACTAGGATTCAATTATGGGATTAGGGCAAGTGTATCCAGATATAGGCTCATGTTACATTATCATTGTGTCAGGGCTCAGTACCTTCTGATTTGGTTGTCCAGTTCTGCAAAGATGTGCAGAGAAGATCTCAAGCGGTATGACATCATGAAATGCCATTTCTAATGGTTAAAACCGTCGCATTGTATTCTTAAAAGGAAAAATTCAGATAAGAATGAGAATCTGGTGAAAACAATACATGTTCATCAAACTTAGATGTTCCTCAATATTCTATCAATTACAATAATCATTCATACTGTACCAAAATATCATTTGCAGAAGAATTGCTCATTATACAATGATATATTGGTAAACGAAGAGAGCAATTACTCATCATCCATCTGCTTATCTATCCTATTTAGTTTCACCCTGCTATATGCACACTATTGTATTTAAATATGTTTATTTTCCATGGTGCCGACATACATTTGTAGCTTCTGGTCGTTCTAATTTATTATTTTGATATACATGGTCAGTATTATCAATTTCGTCATCAAATCTTTTTGTCTTGGCCATTATGTGAATAAGGCAGTGCATTTGCTCACCTGTTTCAGGGATATACGGACTTTGGACGTTTTATCAGTTCTCGCTCTTTTATAACTGGTTCACAGCCTATTGACTTTATTCAGGTAACATTTCATGAATTTGAATCATTTTTCTCTACAACAAAGTAATGGCTACAATAACTCATTACCACATAGTTGAGGACGAGGCTTCACCTTCAATATAAGTATATAACATTCCTTGAGATTTTCTTAGACCTGTTAGGGGTCAGAGGTTTTGGTAGGTTTGCTGGCATCTGGTTTTCAAGAAAAATCCCATGATGTCTTTGTGCCTTATTCTGCATTTACTATGTTGGTAATAATGTTTCAGACTGATACATGTGGTTTATAAGCTCTCTCGTATGTGCCTCATTTCCCATCCTTTCTAATTGACATGCTCGAATTTTCTCATAAGTAGCAAAGGCCTGAACCTAGCATGGTGGCAGCCTGGCAGGTATGGGTGTATATACTCCCATCACCCAGGTTCCAGTTTTCTGCAACTCAAATATGCGCTACTTTCTCCTTTGTAGGTCCATTTGCTTTAAGGATAAGAAAGATTGGACAGGGATTATGAATTCATGATATAAAGTTAAATATCATTTGTGGTTCGAGAAAAGATGGATGACGGATAAGATAACTCAATTCTAACAGAAAAATACCTCTTCTAGGTATTCTAATATTTCTCTACCTCTTTTTCCCAAAGGAGACTTGGTGGGTTTTCCTCCTTTTCACGGGATATCTCTCTGTAATCCCATCTCTCTTCCCTTAGCAATAATTCCTGGCTAGAACAAACTCAGTAGTGATCAAACTGAAAAGAGAAGGCTACATGGAAGTAACACTGCCTGTGAAGTGTGAACATTTTGGAACATAAGAATGATTATAAAATCTAAACAGTTCATTGGGGTTAACAGAAAGGCATAAATGATACATAAGCCATTATACATAAGAATGATTGTTGTTGACTTATGATCTCCATTCATACAGCTTAGTTCTCTTGTGTTGCATCACAATTAGACTGTAAATATATTCATGAACAGATTTGATTACCATCATAACACTAACTTAATCAGCATGCATGTTCTAATTCCATACTTGCAACTCCAGACATTCCAATATGGAGATCTAGTGCACTGTGAAACTACTTTTGAGAAGATGGGCCGCACATCACAGGTTTGTGTCTAAATTCTGATCAGCTTCTTTCTTATTTTCACTACTTTTCGGATTTTTGTGGTCCCAATTTAGGCTTGTGGATGCATTTCTGAACATATTTCAGGTAAACATCATATGCGGTCAATGCCCAAATAAAGAATGCAAAGGTCTGTTGATTTTTCTTATTTTCCATACACCTTTCTGATTCTTGGGGGGAGTACTAACTAAAATTTGATTATGGTTGGCTGCATATAACAAGTTTCTGATTCTTGCGGGGAGTACTAACTAAAATTGATAACTTTATTATAGGCAAACAAGGATGCATCTGTAGTATATCTTATGATGAACTGATGTGCAGGTAACCAGTTTACTTTATTTGCATTTTGGGTGAAGTTTTCTTTCTGATAATTGATGCAGTAGTTGTGGATTTTACCCAGTGCCTACTGCCTATACTAATTTTCCTTTTTAGTTTCTTGTAAATGCATCCCATCCCTATTTTATGTTTGATGTACTAAGTACTAACTGCCAGGCTCTCCCTTGCTGTATTCAAAAAACTTGTAAGAGTTGGGGATGTTTTCATTTGTATAGAACTATTAGTGTGGAAGTAGTAACCGGATTCCAAAAAATTTTATGTTCGCTAGTAAACAGAATAATTGAACCAAGATTACTATTTTTTTAGAGGAAACCATGATTACTATTGAGTCTAGGTCTTCTCATCCAAGTTGTTCCCATGCTGTTAGCATGCCATGATAATATCTTGTAAAACGAAAGACAATATTGTGTTAAACTTTGAAGCGGTTTAGCACAAACTTTTTTAGACACAAGAAGAGGAATAGATGGACAAGGATGTAATCATGTAAATTGCTTTGAACAGAATGGTGCCAAACTTTGTAGAGAATATGACTGATATAAACATGATTCTCTAAAATCAAAGAAAATAAAGTTTGAACATTGAGTATGATATATATTTCAAATCTGTGATTGCTTCTTGTTGTTTTGTTTTACTCCTTTTTTTATATGTTCTTATATATGTTTATAGCATTATGGTGTTACTTGATTGATTCTAGTGTGTGCTTGACTGGTGGCTAAATGTGATCTTTCTGTCAGGGTGACTGTTGAACTTGCTATCCCATGTCCTAAAAGTGGTCCAAGAGTATTTAAGGGTTTCACTGTCGGATTCCATCCCCGGTCATCAGAGTTGGTAATGTTGGCTGATTGGCTTTTCTTATTTTTGGGGATCTTAACTATTATTTCAGTTTGTTTTACAAGTAATTTTGTTACCCTAGGTTTATAATGGATTGACTCAACTGGGATTTGAGCAATCTCATCATGAGTTCAGGTATTATCCTGTCAAAGTATTGTTAACTTTTAATTAGATGATGTTGGCCTATTTAAGCTTCAGCTTATCTGAATAGAAAATACGTAATTGGACACTTTGATTGCTTTCAGAAAAGAACTTTCATCAGGCTTAATATAGGATGCAGGCCTAGAGAGGGTTGACTGGTTTTTAGGTGGGATTTCTGTAAGTTATTAAGTATAAAGCCTATATGGTTGGTTGGACCCAGCTGTCTCTGTCTGTGGGGTGATCTAGTTGCTTGAGTAACCAGTTTGTTACTTAGTGGCTACAACAGATGCATGGCATGGGCTAGACCACTCAGGCACTGACCTGTCATTGTGGGAACTTTTGGGGGGGGGGGGGATGATTAAATGAAACACCCCATATCCATCCAAATGCATGGATGGAAGGGAAGTCTTTAAACAAAATGCCATATGTTCAAGTCAAAAACTAGAGTTTGTTGTTTTGGCATGAATTCTGGTGCTATTAGTGGATCCAAGTAGGTGCTGAAATAAATGTAGGTCGGACAGGGTAATAATCAAAGCTTATTCTGATGCATATTATGTAAGAAAAACTTGGACATGATTCAAAACGTGATTGAGTGATGGATAGTCCTAAAATGGTTGATTGGATGAATGTAACACAATATATATAGATATATTTTTTGTTATTTCCCAGTACATGTGAAAATTTTCAACTAGTCCTAAACTCCCAGAATTTCTGCTGTGAAATTTTAAACAACCGCTACATTATTTACATGTAATTTCCATTGCATTATTCTGTTTTCTGTGCAGCTTTCAGGGTGAGCAGAGTCATGTATCCCTGTATCTTAGTGCAGTGTTTTCACTCTCAGGACTTGTTGGAAAACCTTCCTTGAAGGTAGGGAAAAAAGGATTTAGGCCATAAAAACAACACTTTTTCCATATGTTTTTCTTCATTGATGAAATGTTTTTTTCCCATCAGATTTCGTACTTTTGTGATGTTGTATGTTGCTCCGTGTTAGTGACCACTTCATCAGTGCAGTCAAGCCTAGCTTAGTTGATAATAATACTGCAGTTGTCATTAGTAGAACTGTACTGTATACATGTAACTTTTAAACCATTTTATTGAACCAGGTTAATCCAGTTAAAGGGCTTGATGTGACACTGACAGGATCAGGGACCAACGGTGCTATGCCTACTACCCTGTCCCCTACAATTCTGAATGTGATCTGGAGATGTTAGTTGCATCCTTGTCTCTCCGAACAGATGCATTGATACATTCAATGTATGAGCTTGTTTTCTATATTTTGTAGGTGAAATCGCGCGGAGCAGTCCTTATGAGGTCAACATTTTGATTCCAGTAGAAGGCTATGATCCAATTGAATTTACGCTCACCAAAGAATGTGGTTGGTTCGACCACATAATTGTCAGTTCTACATAAGTGCATATTGACTTCTAGTCGCATTTAGACACATTTCAATTGAGAAAATTTCGTACGTTAGAAATCCGATGGGTTTAGTTTTCAATAATATGGGACATAAATTTAAGAAAAATAAAAAAAACTAACATTCATTTTAACTTAGTGTAGTTTGCAATTCTATGATTAGCACCATCTGAATATTTGCTCTGTAGATTGGACAAGTGTGTTCCTATCTTGAAGTCAAGAAGTCAAGATATTTATGGCAATCATTAGTTTATTATATTTATCTTGAAGATGAATAACTACTAAAAGCTGCATATAACTAGTATTGTGATACAAGCAAGGTGAACAAAAGTTAGTTGATTAGTCTTACAATTCTCATCTTCCTTGTTCAAAAATGCACAGATATATTTCAGTTTGATTACCCTGTGAGTTATGCATTTGTTTGTTTGTGTAGTTCATATACAAGAAAAAGAGAGTAATCCAATGAGAGGCTGGGCAACATTTGGGATTATTTCTTGCATGTATGTGTGCCTTGAACTTTGTAAATTAGCTTCACAGCAATGGTATATATCGTACCATGAATTACAAAGTCTGTTTTCTGAAATTAGCTCTTCCTCAAATTTGGAATCGTTTGTTTCATATGTATAAATTGTCCTGGGCCTTATAAACTAGCTTCACAGTGACCACCTCAGATTCTTTCGTAAACATCTTTGTTGCAATTAGTTTTCCTCTGACGCTCTATTCATCGATTTTTTACTGTTTTTCTATGGGCATGCAGCTTCATTGTGTTGTCAAGTCTACTTTGTTGTGGAGGTTTCATCTACAAAACACGTGTCCAACATCAGGTAAAATTTTATTCTGTAAAACAAAAATCTTATAAGCAATACTGTGCAGAATTGTCTTGATAAATGGCACCTTTGCGCCAATTTCAGTCTGGTTTATATGCGCTGCCTGGGATGACCATCCTGTCTGCCTTCCTAGATGCGGTAAGTGTTGAAACTTTTATCTGAACTACCTGCTCATTGCCATATGACAAAGTAATTAATAATCATATAATAAAATGCCAAAATACTTATTTGTAACCTAATCGTTTGTGATCAGGTTGGTGGACCAAGCTACATGAGAGCAGATGATCATGGCGGAAACCATGCAAGCCAAGCATCATGGGAACGCATGCCTGGTACCTCACAAGCAGCAGAGCATGGCACCAAAGATAGGAGATACGGATCACTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003198