BGIOSGA003252

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Revision as of 10:48, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003252| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA003252, complete gene.| tag = P0038F1...")
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Gene Name

BGIOSGA003252

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003252, complete gene.

LocusTag

P0038F12.32

Ensembl Transcript ID

BGIOSGA003252-TA

Ensembl Protein ID

BGIOSGA003252-PA

Length

3613

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:10670692..10674304

Sequence Coding Region

10670692..10670799,10672937..10674304

Genome Context

<gbrowseImage1> name=IndicaChromosome01:10670692..10674304 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:10670692..10674304 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCGCTTAGGCAGGGCGACGACCCCGCCATCAAGCTCTTCGGCCGCACCATCCCCCTCCTCCTCGACCCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGACGAGGTCATGCCTAATTTAGGAAATGGTGTAAAAACCAATAATGACTTACCTTTAGTCTCAGACAAGCTTTTGATTGTCAAAGGTATTCCTTTTTGTCCCAACAATAGTAAGAAAAATGATTTACAAGGCATCAGCAGACCGGATGGAAGAATAGAAATCGATTCCATGACTGAGGATGTTAAGACTGAGCCTGATGGATCTGTCCCTGAGAAGATACTCAAGAAGCCAGATAAGATTCTGCCATGTCCACGCTGCAATAGCATGGAAACAAAGTTCTGCTACTTCAACAACTACAATGTTCACCAGCCCAGGCACTTCTGCAGGAACTGCCAAAGATATTGGACCGCTGGTGGAGCTATGAGGAATGTCCCAGTTGGTGCTGGAAGACGCAGAAATAAGCATGTGTCAAAATACTGTCAGGCGATGATGACGTGCAATAATACTGTAGCTCCTGGAGATGTTTCTGATGTGGTTCACCATCAGGTTATTACACATGGATCTTCTCTCCTTCCAGCAACACTGAAGGAAAATGAAACACCTACAGAATTCATATCAGAAGTACCACCATGTAAGTCTTCAGCTTCAATCCTTGATATTGGAGAGCCGAATGATACTGACCTTGTTCCCTTGGCCTCTGGTGATAACAAGGAAGAAAAATCATGTGCATCTTCTGTGGTAGTATCCAGCTGTTCAGAGAATCTGATGCCAGATAATGCAATTATGAAAGAGCCAAACAACAGGTCAGGATGTTGTAATGGTGTGGCATTGCCTTTCCCTACTGGACCTGCTTTGGTGCTCCCCTGGAGTCTTGGATGGAACAGTGTTGCTCTCATGCCAGCTACCCAGTGCTCGATGCAGCCCGTTCTTGGGTTAAAAGATGGGATACCCTGCCCGCCTTCATGGCCACCGCAACTGATGGTGCCGGCCCCAGGAATCTGTACTCCTGTTGTTCCAATCCCTCTTGTGCCACCTCTGTGGAGCTGCTTCCCTGGCTGGCCTAATGGAATGTGGAATGCACAATGTCCTGGAGGTAATACTACTGTGCTGCCGTCAACCGCTCCAAACAAAATTTCTTGTTCAGGAAGCAGTTCTCTGGTGTTGGGAAAGCATTCAAGAGAAGAAAGCTTGCAGGAAGAAGAGAAGACGAGAAATTACTTATGGGTACCTAAAACTCTTAGGATTGATGATCCAGCTGAGGCTGCAAAGAGTTCAATCTGGGCGACCCTTGGCATCAAGCCTGACGATAAAGGCATATTCAAGTCTTTCCAGCCAAATGTTGCGAAAAATGGCACGGCACCAGAATCGCCTCAGGCTCTGCAGGCCAATCCAGCAGCATTTTCGCGTTCTCAATCGTTTCAAGAGACGACTTGA</cdnaseq>

Protein Sequence

<aaseq>MAALRQGDDPAIKLFGRTIPLLLDPAAAAAAAAADEVMPNLGNGVKTNNDLPLVSDKLLIVKGIPFCPNNSKKNDLQGISRPDGRIEIDSMTEDVKTEPDGSVPEKILKKPDKILPCPRCNSMETKFCYFNNYNVHQPRHFCRNCQRYWTAGGAMRNVPVGAGRRRNKHVSKYCQAMMTCNNTVAPGDVSDVVHHQVITHGSSLLPATLKENETPTEFISEVPPCKSSASILDIGEPNDTDLVPLASGDNKEEKSCASSVVVSSCSENLMPDNAIMKEPNNRSGCCNGVALPFPTGPALVLPWSLGWNSVALMPATQCSMQPVLGLKDGIPCPPSWPPQLMVPAPGICTPVVPIPLVPPLWSCFPGWPNGMWNAQCPGGNTTVLPSTAPNKISCSGSSSLVLGKHSREESLQEEEKTRNYLWVPKTLRIDDPAEAAKSSIWATLGIKPDDKGIFKSFQPNVAKNGTAPESPQALQANPAAFSRSQSFQETT</aaseq>

Gene Sequence

<dnaseqindica>1..108#2246..3613#ATGGCCGCGCTTAGGCAGGGCGACGACCCCGCCATCAAGCTCTTCGGCCGCACCATCCCCCTCCTCCTCGACCCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGACGAGGTGAGCCATCGATTTCATCCAATGCCAATAGGGAAGTAGTCGGAGAGAGGAATCTTTATCTAACTCCCTCCCCGCTTTGGACGAGATGCGACGCGCCTCGCTTTCTCTCTCTCTTTCTCTCTTTTCCTGGCTGCTTTTTGGGGTATCGATGCTTTGGGTTTGCTCTTCTAGTTCGTGTCGGCTAATTAGGAGATTGAGAAATGAGTTTAAAAAAGGGATTAATTCTTTGCCGCCATGGTGTTCGATGCAAATTCTCAAGCACATTCTTCTTGTTTTTTCTCTCTCCAAAGAATTCAAATACCGCCATGGTGTTCGATGCACGGCTCCGAATACACTTTTTGGCAAATACTAAATTGCCAACTTTTGCTTAGATCCATTTTGTAAAAAGTACTCCAAAACAGCAAAACTTTTACTATCTCCGTCCTAAAATAAGTGCAGCCATGAGTTTCAGCGCCCTACTTTGATCATCCGTCTTATTTTAAATTTTTTTATAATTAGCAATTTTGTAGTTATAAGATGATAAAACATGAATACTACTTTACTCGTGAATTATGTTTTTAATTTTTTCAAAAATTTTTCAAATAAGACGAGTTGTTAAAGTTGGGCGCGGAAAACCATCACTGCACTTATTTTGGGACGAATGGAGTACTATTTTGGAGGAACTAAACAGGGCCTAAATATACTAATATAACTAGAGAAAAGAACATTTTTTTTTCAGTTTTAGCTCATTTATTTGAACAAATAGAGTGGGTCAACGGTATATTAGTGACCCATGCTAATCCCCAACCTCATATTTGTTGGTAGGAAAATTCTGTTCTAGAAAATTCTGTTCTATCCTTTCTTGATTTCTTGGCAACATTTGGGGTAAGATTCTGGGAGTTTGATTGGCTTATCTTAGCTTTCTTTGTGCAAAGAACCATCTTTCGATAACCATATGCAGAACCTAGAATAGATGGTACTAAGTCTGTTTGTCCTGAAACCTGATAGACTGGATAGTCCGTGCCTTTGAACCAAATTGCTTATCAGGACTTGATTTCAGTGCACTTGCACTCTAGTATGGGTTAACTTTTGTTGCCAAAGGTACTTTTTACGTACTAGTATATGAGTTATTCCAGCAAGCAATTCTGGAAAAAAAGAAAAAAAAACAGACTCTAAATGCTAAATTGGAGTCTGGAAAAGTAGTGTTATACTATGTACTATGATAGTGGAACTGAGCCTTAGTTTTCAAACAGTAGTTGTACGTACCTCTGAAAACCGTATTGGTTTGCAATTTGGTTTCAAAACACTGGAGAAGGGACTCTGATCAGCTCTCTGCAAGAAGGAACTGAAAATGTGTCATATATCGTACATGTCGATTGCTATTTGCTACAGAGCAAATTTGCCATACATCAAACAATTTTGCATGTCAAACTGACTCCAAAGATGATTTTACTACCAGCCTTAAAAATAAAATGCCCACTCATTACTTATTTACATATGCACATTGTATTGTTGCTATGTAACAGGTTTGATACTGAGTAGCTCTGGTACTAACATGTGAAGTATTGAGCTATGAAACTGAAGTAATGTTTTGCTCGAAGTGCTGCTTTATGCTTAAACTCAAGTGCGCCAGAAAACAGTTGCATAGCCACACAGTGATAACTTGAAATGTTAACATATGGTATTTTTAGCAACCCCAAGTATGAACTAGAGTTTTACAAGTGCAAGTGAATACTGAGTATAATAGAGAAAAGATCCCAACGGGGAGAAATTCTTAGTAACATTAGGCAATAACTTATCGCACAAACATGGCGACTCTGATTATTCAGGGATAACATAAAATGATTTATATTTAACTGAAGGACATTGAAACTGCAACAGAACATTGTAATGGCGATGTATCAGTTGTGCCATCAGGTAGTTTCCGTGACCCCACATGATTCAGCTGAAGCTGAAGAAAGACTTTCATGAAAATTTAGGCCAGTAGCACCTGCATCATTTTGAATATAACATGGCTTATATGCCTCATAATAATTGAATACTTGACACTATCACACTATCACAGTTTTAACATTTTGCTATACTTTTAGCTAAATGATCCAAAATCTCTGCTTGATATTTTATTATTTTCTTACCTCTCATGTATAATCCATTTCAGGTCATGCCTAATTTAGGAAATGGTGTAAAAACCAATAATGACTTACCTTTAGTCTCAGACAAGCTTTTGATTGTCAAAGGTATTCCTTTTTGTCCCAACAATAGTAAGAAAAATGATTTACAAGGCATCAGCAGACCGGATGGAAGAATAGAAATCGATTCCATGACTGAGGATGTTAAGACTGAGCCTGATGGATCTGTCCCTGAGAAGATACTCAAGAAGCCAGATAAGATTCTGCCATGTCCACGCTGCAATAGCATGGAAACAAAGTTCTGCTACTTCAACAACTACAATGTTCACCAGCCCAGGCACTTCTGCAGGAACTGCCAAAGATATTGGACCGCTGGTGGAGCTATGAGGAATGTCCCAGTTGGTGCTGGAAGACGCAGAAATAAGCATGTGTCAAAATACTGTCAGGCGATGATGACGTGCAATAATACTGTAGCTCCTGGAGATGTTTCTGATGTGGTTCACCATCAGGTTATTACACATGGATCTTCTCTCCTTCCAGCAACACTGAAGGAAAATGAAACACCTACAGAATTCATATCAGAAGTACCACCATGTAAGTCTTCAGCTTCAATCCTTGATATTGGAGAGCCGAATGATACTGACCTTGTTCCCTTGGCCTCTGGTGATAACAAGGAAGAAAAATCATGTGCATCTTCTGTGGTAGTATCCAGCTGTTCAGAGAATCTGATGCCAGATAATGCAATTATGAAAGAGCCAAACAACAGGTCAGGATGTTGTAATGGTGTGGCATTGCCTTTCCCTACTGGACCTGCTTTGGTGCTCCCCTGGAGTCTTGGATGGAACAGTGTTGCTCTCATGCCAGCTACCCAGTGCTCGATGCAGCCCGTTCTTGGGTTAAAAGATGGGATACCCTGCCCGCCTTCATGGCCACCGCAACTGATGGTGCCGGCCCCAGGAATCTGTACTCCTGTTGTTCCAATCCCTCTTGTGCCACCTCTGTGGAGCTGCTTCCCTGGCTGGCCTAATGGAATGTGGAATGCACAATGTCCTGGAGGTAATACTACTGTGCTGCCGTCAACCGCTCCAAACAAAATTTCTTGTTCAGGAAGCAGTTCTCTGGTGTTGGGAAAGCATTCAAGAGAAGAAAGCTTGCAGGAAGAAGAGAAGACGAGAAATTACTTATGGGTACCTAAAACTCTTAGGATTGATGATCCAGCTGAGGCTGCAAAGAGTTCAATCTGGGCGACCCTTGGCATCAAGCCTGACGATAAAGGCATATTCAAGTCTTTCCAGCCAAATGTTGCGAAAAATGGCACGGCACCAGAATCGCCTCAGGCTCTGCAGGCCAATCCAGCAGCATTTTCGCGTTCTCAATCGTTTCAAGAGACGACTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003252