BGIOSGA003271

From RiceWiki
Revision as of 10:49, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003271| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA003271, complete gene.| tag = OsI_014...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA003271

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003271, complete gene.

LocusTag

OsI_01419

Ensembl Transcript ID

BGIOSGA003271-TA

Ensembl Protein ID

BGIOSGA003271-PA

Length

4331

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:10982385..10986715

Sequence Coding Region

10982385..10982540,10982935..10983051,10983476..10983544,10983620..10983691,10986416..10986487
,10986575..10986715

Genome Context

<gbrowseImage1> name=IndicaChromosome01:10982385..10986715 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:10982385..10986715 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCCATGTCTTTGGCCCACTAAGCGAACCGTCGGTTCAAAATCAGCAGGTTCACCGGTTTTCGTTAAAAGCCGTCCGGTTCAGCCGGTTCACCCCGGTTCAACTGCACAAACGGTCTTTGAAGCAAACCGAACCGGCGAAGTCCCTGGTTCCGATACTTCTCCAAACACATCAAATCCTTCTACTTCGAAGGATGACTAGCTTTCGGCTTTCTACTCCACCTATGGATGTGGCAGCATTGTTTTTGCCCCAGTCCATTGCTGAGCAGCATTTGGAAGACACTTTGTTTGACGGTCTGAGTAGGCTGCAGCTAATGCGACTGTCTATCTCGGTGTTGAAGTTGGAAGACACTTTGTTTGATGGTCTGAGTAGGCTGCAGCTAATGCGACTGTCTATCTCGGTGTTGAAGGTAGCTCAACATCATGCTATAGCCATAACAGAACAACATCCTATTGCTCTTGTCAGAAAGCCACTCCCTGATCATAAGTTGGAAAGGCAAGCAACAATATTAGAAGGCTGCAAGGTAGGTATAGAGAAGAGAAACAACACCGACATAGCTGATTTGCGACTAGAGGCAACGAAGCGCAAGCTAAATGATGCCTACCAGGAAGCTGAAAACAGTTAG</cdnaseq>

Protein Sequence

<aaseq>MAHVFGPLSEPSVQNQQVHRFSLKAVRFSRFTPVQLHKRSLKQTEPAKSLVPILLQTHQILLLRRMTSFRLSTPPMDVAALFLPQSIAEQHLEDTLFDGLSRLQLMRLSISVLKLEDTLFDGLSRLQLMRLSISVLKVAQHHAIAITEQHPIALVRKPLPDHKLERQATILEGCKVGIEKRNNTDIADLRLEATKRKLNDAYQEAENS</aaseq>

Gene Sequence

<dnaseqindica>1..156#551..667#1092..1160#1236..1307#4032..4103#4191..4331#ATGGCCCATGTCTTTGGCCCACTAAGCGAACCGTCGGTTCAAAATCAGCAGGTTCACCGGTTTTCGTTAAAAGCCGTCCGGTTCAGCCGGTTCACCCCGGTTCAACTGCACAAACGGTCTTTGAAGCAAACCGAACCGGCGAAGTCCCTGGTTCCGGTTTTTCCCGGTCGAACCGCCGGGCCGGTCCGGTTTTTTGTACTATGGTTGTGCAGTCTCTGCATTTGTTGCCTCCTCATCATATGTGCAAGTGTATAAGTGTACAACTGGTGTAGGTTTTGAAATATTCACCTCATTATTTTGGCTATTGTACTTAGAAGCTCCACCATTTCAGCACGAGGTACATATTAAATCCTTTACATGATATGCATGCAATACTTTTATTCTGCAAATGCATGTAAAATAGGCCACTTCAATACTCTTGTGTTATGCATACTTAAAATTTTTGTAAACCATTATTATTCTACTTACACAACTAAATACTATTACTTAGGTAATGAAAATGTGTTTGCATTTCCAATACAACTAAATGGTTAGTATTTGTAATTTGCAGATACTTCTCCAAACACATCAAATCCTTCTACTTCGAAGGATGACTAGCTTTCGGCTTTCTACTCCACCTATGGATGTGGCAGCATTGTTTTTGCCCCAGTCCATTGCTGAGCAGCATGTAACTGAGGTGGTGGCCATTACCATGACAATGCCAACGTCGTTGCTGCCAGCAAGGTGTCATCCCTAATCGATCAACAAATACTCGAGGCTCTCTACAACGAGATCGAGGAAGGATACCCAAGTGAACAACAAGGCGCTCCGCATCAAGGACATCATCATGAACTACAAGGAGAAGGCGATCTATCTAACTATATATCTTGTTCATCACTTGATCAGCAAACAAAACAAAATTGAAAAGAACAAAAACTTTCATCCATAATCCATCCAGTACTGTTGCATTAGATTTTTTTTTTTACATAATGGATCTTTCATTAATCCAGCCTCTATATCCATTAGATATTATAGCATTATGATGTTCTTGGGATAGATATTACTGGCTTATTAATTATTAATTGCATCTGCATTTCTGTGATCATTTGCAGTTGGAAGACACTTTGTTTGACGGTCTGAGTAGGCTGCAGCTAATGCGACTGTCTATCTCGGTGTTGAAGGTATGATGTTCTTGGGATAGATATTACTGGCTTATTAATTATTAATTGCATCTGCATTTCTGTGATCATTTGCAGTTGGAAGACACTTTGTTTGATGGTCTGAGTAGGCTGCAGCTAATGCGACTGTCTATCTCGGTGTTGAAGGTAGTACGTAGTCCAACAAAATGAAGATATTTTTCTTTCTGAATTAAAGCAGTGTTATCAAGGGCATCAAGATCAAATGAGCATTATTTTTCGTTTGCTCTACTGATGTTAGAATTTAAACTGCCGATTATATTTCTCGCAGAGTACTCAGACTGTAGAAGTTGTTCCTCCGTTGAACAAGCATAGATCGCCAGTAATATGCAAAATAGCACATGATCTCGCCGAGTAAGTTCGTTGCACTCTTAGTTAATTCCAGCTTGATTATTATATATAACTTATGCAACTGCCAAGATAACAGAATGGCTAAGTATACGCAATCTCAGCAAGCTGTATATATACATGACATGGAGGCTAGCTATTTATTAATCTTCTCCTTCTCTAGCTAGGTTGTGATTATTGTTTAGAGATTTAAATTTAATGCACCTTACTATGTAGATTAATTCTCAACTCCTCTCAATAGTGAAAACAAACTATTGTGTGGCAATGTCTTGTGATTGTGCAAATAGCTTATGATGGTTTAGCATTTCGTAGTAAGTTTGAGCTTTTGTCGGCATCTTCAATGTAAAGTCGAGCTAGATTCAATTCTTTCTTTTTTACACTTATGAATGTAAAAGTGCACCATGCACTTTTATTCTTTTTTTATCACCCTACACTTTTGGACTGGAACGCGGGAAAAAAATAAATATCAAGAAAATAAGTTGGTGTTATTCTATTCCATGTTAGACATATAGCTAACTCATAAATAAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTTCTTTGGAAGTACAATTAGAACTAAACAAACACTATTACAACATATCAGTAAGAGAGTAGTTTCACACTAAAATCCATCTCCGGTGGAATTTTACAAAGTCCTTAAGAGTTGAAAAATATACATATGTCTTTCTTTGGAAGCACAAGGACTAAACCATAAAATACCACCATATCGTGAGAGGGCCAAAGTGCAAATATCCCTAAACGGCTAAACCAATAAATCTTTTTCCCCTAATTAAAAAAAACCTCTTGCCATCCATTTATCACAAGTTCATATCTCTACTACTACCTCAATCCTAGAATGACTTAACTTTTCATCATTTTACACACGTTAATACAAAATTAAAAAGATTATAATGCCCTTCACTTTACCAAACTTCAATGCATTTGTTATCCACTTTAACGAATACCAATGCATTTGTCTTACACTTTAGTAAATCCCAATACATTTGTCTTCCATTTTAAGAACTAAATGTGTAGTAATGATGGATTGTGATGGAGAATTTGTTTCTAAGGCCTTGTATTCAATTTATTTTATTTCATATACGCTATTATTTTTCGATATTCCTTGTAACCTCTTAAGTGGTTTTGTTTTTAGTCCCTATATAAATGTCCATTCCACATTTTGACCATGAGTCACAGATCACTTTCCTGAAAACCACTATATGTTTAATAGTCTTTCCACCTAAAATCAAAATTCAGTTTGGCCATTCAAACTTTAATTCAACTATTGCCTATCCATTCCTCCTTCATTTTTGGTTTAAGTTAGTTGAAATATCCTAATTTTGATTATATAAAAAATTAACAAAAATTCGGTTATTTGAGCATTCTTTTCCTCCTTTTTTAAGGGCATAGATTATTTGTAATATTCTTATAAGTACTATTACGATTATCTAAGAGATAGTGTAGAACCTACACACATATGATTTTTTTCCCAAGGATGCATGTTTGAAAATGTTTAGACAAGTACGATCATTGAAAGATATTGTAATTGTAGTATGCATATTTGATAAGAGATAGTGTAGAACACACAAATAAATAAATAAATAAACACACACACACACACACACACAAAATGAAGGTAAACTCGGTGACTTAATTACACATCAAATCCATCTTATGTGGAAGATGACTTTGTCCTTCCTACTCCACCTATGAATGTGGGAGTGTTCTTTTTGCCCCAGTTCACTGCCAAGAAATATGTATCTAAGGTACTTTTACATGTAAATGAAAAGCTTCATTTCTAGCCATGGAGCTTTTCATCACAATATAATTTGCCAACTAATTGTTCCATATACATGAATGTCCCTATAATCTTACTCTTGAATAAGATTACAATCAACGTTTTGTTGCTTTTCCATTTTCTTTTATTGCTGCGGCATGAAGTGGATGATGATGATGGAAGTGAGTAAAACAATTATCACTAGATAATCTTTGTAAAGTAGATTATGATTCACTTAGATTTATTGATTAATAGGATTGCATATCATGTAATAGTTCTAATACGTACACTACGTTGAAAATGATTGTGGTTATGGGTACAAAATGGAGATTGCACAACCAATAACAAATGTTGATGAAAACATAGTGTACAAGTGACAAGATTTATCAGGACAACACGAACCTCCAATATGAGGCAAGCAAACCTATGGAACAAAACAACATATCCTAATGTAAATACTATCCCCAAAATCCATGGTTTACCAACAAGACAAACCCCGCCATTAAGACAAACAAACCTACAACTAGGAAAAACACAAGGGCCAAGATTACATACCAAGCCAGCCTCTAGGTTTTCTGTAGTAACAACCAAGCCTAATAAACCCACACATAGTCAATACACATCAAGGAGTCAATTTTGGTGAAGAAACTCAGAATAAACATGGTCTTGGCACGAAACCAAAACAGGCTCAACATCATGCTATAGCCATAACAGAACAACATCCTATTGCTCTTGTCAGAAAGCCACTCCCTGATCATGTGAGTGTAAGTTCATATTTAATATTTTAATCACTACTTTGTTGTGATTCTTTGAAAGGCTTTAATAGTCATGTGATTTGATTTCAGAAGTTGGAAAGGCAAGCAACAATATTAGAAGGCTGCAAGGTAGGTATAGAGAAGAGAAACAACACCGACATAGCTGATTTGCGACTAGAGGCAACGAAGCGCAAGCTAAATGATGCCTACCAGGAAGCTGAAAACAGTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003271