Os09g0108400

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Revision as of 07:16, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0108400| Description = Conserved hypothetical protein| Version = NM_001069099.1 GI:115477937 GeneID:4346382| Length = 7044 bp| Definition ...")
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Gene Name

Os09g0108400

Description

Conserved hypothetical protein

Version

NM_001069099.1 GI:115477937 GeneID:4346382

Length

7044 bp

Definition

Oryza sativa Japonica Group Os09g0108400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:746199..753242

Sequence Coding Region

746395..746691,750509..750631,751457..751636,751709..751790,752620..752684
,752772..753062

Expression

GEO Profiles:Os09g0108400

Genome Context

<gbrowseImage1> name=NC_008402:746199..753242 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:746199..753242 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcagggatcctcgcgtgggcggccgacgtggtcggcggggccggcgccgccaacgacgacgaagctgatgacgctcgggcggtggcgtccgcggccatgaccccggagcagcgcctccgtgccgctgacctggatgccaaggcagcatcgctgcggcgctcgatccacgacctccgcctccgggtgcccccgcctcatgtggcgcagcgcctgccgcacctccatgctcattccctcgcgtcctcagccgccctcgcgctccagctcaatgcccactcctccaccaaggaacaggcactgcagagagagataacacttcaagaagaaaatgcagcttatgagaaagctatatcaaattgtcggcagaaaattcaggaaaagcagatggaggttactctgcttcggagtaatttgaaggaaatggaaatttcagagcaggatttgaaggcacagctggacaatgctcagaatgagcaatatgcttctcaaaataaagcatcagctgctgcttctgacaatactggaaatgctttgatggaagctgaatcattgattaatctcaagtctaatgacttgaaagagaagaatgaagagctgaaattgttggaaagtagtgtgcgagtgctggagatggagtggtccgtagttgaaggggaatccttgaagaatccgactcctgcccagagggaaaaggtcctggagaaacaattacatagcctcattgagcagctgacagctaagcaagctcaagctgaaggcctaatcgtggatgttcatgccaaagaaaaggaattggaaaggttgaataatttacataaaaatcttcaaagtcgtaacaatgatggtagtgtagcacgaaatccattcagggctgtgcatgaagattctgatgccaaagctgttcggcgaccctatcaatttggtcttagaaccgaagggctgaaaaggttgatgattcttaggtctgcttttgttctctatattttggtacttcatattgttgttttcataaagctctcggtttcaaagcagtaa</cdnaseq>

Protein Sequence

<aaseq>MSGILAWAADVVGGAGAANDDEADDARAVASAAMTPEQRLRAAD LDAKAASLRRSIHDLRLRVPPPHVAQRLPHLHAHSLASSAALALQLNAHSSTKEQALQ REITLQEENAAYEKAISNCRQKIQEKQMEVTLLRSNLKEMEISEQDLKAQLDNAQNEQ YASQNKASAAASDNTGNALMEAESLINLKSNDLKEKNEELKLLESSVRVLEMEWSVVE GESLKNPTPAQREKVLEKQLHSLIEQLTAKQAQAEGLIVDVHAKEKELERLNNLHKNL QSRNNDGSVARNPFRAVHEDSDAKAVRRPYQFGLRTEGLKRLMILRSAFVLYILVLHI VVFIKLSVSKQ</aaseq>

Gene Sequence

<dnaseqindica>197..493#4311..4433#5259..5438#5511..5592#6422..6486#6574..6864#agccgcagatctccatcccgccagcagcggcgccggcatcctgcttccaccgcgtcctcgcaggtgagcagagcactggttcccacatcctcaaaatctctctctttctctttgtcttaaccttaatttgcttcacttgtgtagtagtagatagatctatttgcctggctctcagggaagagggtaggagtgtggcatgtcagggatcctcgcgtgggcggccgacgtggtcggcggggccggcgccgccaacgacgacgaagctgatgacgctcgggcggtggcgtccgcggccatgaccccggagcagcgcctccgtgccgctgacctggatgccaaggcagcatcgctgcggcgctcgatccacgacctccgcctccgggtgcccccgcctcatgtggcgcagcgcctgccgcacctccatgctcattccctcgcgtcctcagccgccctcgcgctccagctcaatgcccactcctccaccaaggaacaggtaaaccgtcgtttctttttttttcttttgccttcttattaattcattcagtaattctctactatgtaatcttcaacatcagagttaatcttgtatatgaaatacaatcatatgtgaaattacgatattttgaactaatttatctcgaaatgcacttgacaaagtataaaattaactcatgttgaagaatgcatcgttcatccctcctagggacaacatgatctttttgcatgggctaacaaagagcaatggatggaacccttacagtgatggcatctctgaatgggacaaactgtctcgtacgatgccattccctggaagttacatccgttgatggcatttccttgaatagtgcgcttgtcaatgacatttgtttgattttctctttgaactatggggataacttcacccctccaacacacacatttccattactagaaaatgcacttaagcatttccatctaataacagactcctgaaagacacatagccttaagcacttccaaagggcaaagggggagcaacagtagatgacataaaacagtgactcttagacgctgccaacacaaaatgaaacttatgatataaaaagaaccacatttaattcagcaatcaagctcctgcaattattccagccgagccggttgctatctccacccatacctcaagctgaagacttcagcagccacttgctttggcagcctgccacccttccgcattgcagctgacttgcgtttccctgcaatatctgcaatgacgaccaatatgagaccaaatgatacattcaatacaatatctcacaaggtcagtttgtcatgggctttgggccgggagtcctaggcacaatgggaacggtatccccacccctcatgataagtgcgtagctcagtttgatagagtcacggtctgttaggattaggttaagtagtcctccatgtatataaggagggatcctatctcaggtcagttaggcattagatcaagatttatcttagtgcccatcggccctgccttctcggtgcaacggagagcgtcgcgtcatttaggtccagggccattcccagttctttcctctgttataaccaaatctatttctcttcaccctatttcatccctaataatcctagcacgtgacagttggcatgatatttttaaaacatgatgtgttccctgttttccataatgactaaagaacagctatccaagcggcaactaatttctgcatttttttattgaactgtgacaaccaagatccaaataaatcactcaaagtatcaggtccgttacattccatgtgaatcttgctaggggacacttcagaaatagacagtagtgcaaaattagcattagttatcatctcttttccatacaatgctctaatacccttggtcaggatactcttttctagaatttaaccacataaccactttaatttgtaaatgtaatttgaacttccaatgtttgtcggagagtaagttgtgttcgctatagttttagttctttgtaaaaaaaaagatagtaaagtggccatttttagttaataatcaaactaatttatctttctggttattcaatagaatggtctgacataacacttgcaagtttctgccataaaattggcccttcaccataaagagccctcctaaatgtaaagagtttccatcctgcattcataacctttgcaatggtaacaatcttattaaaagatatagcatatagtagagagaaagtttgcttcagcgatcttccgccaaaccatttgtcctccccaaaactgtcagtatatatttcatgtgttccttgttttaagggttgcatgtacctctcaagttccaaatcaattatttcatgatttatttgattattttacttcaccttatttcatttttggtgtgatcttgaacatcttaaggtttccaatttttaggacaacaattcctgctatgcaaataaaaaaaactaaggacaatataacaaaaaatgaatcgatagattgacaagtcacacaagggataatcaggttcaagtatttaaacttgttgagcttaaatacttgaaccacaagaacacataagttatgcaagaaaataataggtctagtgtgaactatatcttgacaggttgtgtcattgaaaactattctagacacaacgtagaaaattcttggaaaatttatgagggggaagggaaaattttgccaagggtttgtggctaagcagggcatgtgatggtcacttgggagctggtcacactgagtgggctcacatgataactatgcttaaggccaaagcttgttggcacagcagtagaactgaatttttttgttctcaaaatgagttttgatgtgggattgaaacggttggaaagagcactactcaagttttccaaagtgttgaagaatttctcaaccggattctgtatttaaaagttacacatgcttgaagccattgctgtcactggactactagagggcaaactaagattcctgaaacccaaagttatgtggtgtcctttcttggacagtaccatgccattctattacacctaatcacatataaacttgcagttccatctttaggtaccaactggttctttttcttgaatacagtagcaactgattctagaaatgtactgattcaaccatagaaacgatttgcctcataaattgacggtttaggtgttgtgtgagtatccatggtagagttctcatcaagcaggtgtacggcacaatttggagagtgcaccatgtggtggtataagttaggaggcccaattattgatctctagaactgaaacttagtgtgcatgctagtgctaatagacatcaagtgctggcctgttcttctcaacctattgggctgcacatacatgaaccatcccgtgttgcaatgcgaacgtttggttgcatgcatgttcttgcttggatacatgaagctgattattttacatggtattcgtggtcaagctgggcatgtcaaaaatttttcaggaacagaaaagtaaaaaagactcatgagatcattgaaaactaaaagatgcgcaacgctgtgtaaaaggactaaacttttgccataatctcatgcatgttgtttaatgagcttatgcaaggaattctcttcgtggtgtctatctggtcaggctgggtatgtcaaaactgatgctatcaagggtaataactacaaaaattccaatacaagcagttgtcctttgtaatgtgctgaggctaagtggccaccattgatttgtatctggagcggcacgatgtgatggttttgttgctattcttgcatatgatagttgtgtataaatatatgtccactgttttcaggatcaccatcccaggtaggattattttttcttttcacaggatcagatcttatatcaaattatataaacagttctaattgtatttttaaaacacataggacttgattagttcattgccttaagaaatttaggtagagcttattttcgttagcaaacaaaatacccttattttaccacttagcggtatttggtagcaaacgacatatcttccccatctgtaccttaccaaatttagttttggtaggttggtccattttctactttttagttaactagaattatgttcatacttttttgatgtttaatcacgtatgtgaatatcaatgcatttgttcatattacatcaaataatcttattatatggaccttgtctaagtgttattttttccgaaattaatcattttattgtccaattactctgagtaacacagcctggcatattctgcatttcttatggacttctgtaatacaattcgcagattttttgtaggcactgcagagagagataacacttcaagaagaaaatgcagcttatgagaaagctatatcaaattgtcggcagaaaattcaggaaaagcagatggaggttactctgcttcggagtaatttgaaggtacattattcatagttgtatcaacaaggtagttctacacttgcatcatcatcatcatcatcatctctctctcttatccttctcatggtttcctcgcctgatgttcctaagcacattatatccctactggtggcacattgactagggagaggatcacctttctttaagcgattggcattagggaggatatatgagatatgtggagttaattgaattatgaaagaactacatgtacattatgcgctgcaatcaactgatacaattggagaaaagatttctattgaaggaatgtgggttgtttctttctgtactagacaaatacatacgtgttccatctggattaagcatatcataaattctgaaattcagaagttgcacatattttttttattgaaaatcaatccccacataagtctgttacgaaccacctatacaaataatataattatctggagaagtcgtcacgtgttggatagcagacttgtcaccaccatcatcactagtttcttttgtattagtaaaagagattttcattcttttgaacaactgaaggctttacatgtatattgtttattttttatctccacctggctactgtgcacgtctatctaagtagtaatgttgaatacgcacggtaaacaggaaggcaggcatagtcttcacaaaagaaaatggtttgtctcataatgcgtgagacttaagttgtgatctgtgctctccaactgagctatatccttacattttttttgaacatatcgttttcttttcctaccagaaatgtgcaggaacttgcacaataacttagtagaaaaatgatgtttgcaggaaatggaaatttcagagcaggatttgaaggcacagctggacaatgctcagaatgagcaatatgcttctcaaaataaagcatcagctgctgcttctgacaatactggaaatgctttgatggaagctgaatcattgattaatctcaagtctaatgacttgaaagagaagaatgaagagctggtatgatacaaacatagaatcatttctcaatctaaaacagttagtaggtttataaccagatcttcataacagaaattgttggaaagtagtgtgcgagtgctggagatggagtggtccgtagttgaaggggaatccttgaagaatccgactcctggtaaattttgattgtttttgttaagataaacattttaaatttttgttgtcttatttacttcatcattagttgaagagaaacacgagttgtctaaattaatgactatgcagccttccatgccttctttttttggaataccacattgagctacatcctacatgtatacactataccctaccaaatgatttaccaaacggagcatagataatttcaatgttgtgccatatacatagaaatacatttgtgttgtgaactgtgtggattcttgagctatatgtgtaccctacaaaaatgatcgtaccaagagtagcatggatattttttacgttttgtgtaataaatacttttgtggtcacagcatggaattttgatgagttagatctggagtgataaaggccctcctggatacagggccaaggggtaaatttgaaattgacttagaagtggttgttggaggctttgagctctgacatatgctaatagatcttctgttgacgtacattaaatttaacatatactccgtctgtccctaaatatttgacgccgttgactttttaaaacatgtttgaccgtttgtcttattcaaaaacttttgttaatattattcaaaaacttgagtagtagtagtatatttaacaatgaatcaaatgataggaaaagaattaataattacttaaaatttttgaataagacgaacggttaaacatatttaaaaaaagttaacggcgtcaaatatttagggatggagggagaatagtttatttatttatttttgtttcacgttctgtatatttcagtccctcagtaaccctttctgtcacgtatgcagcccagagggaaaaggtcctggagaaacaattacatagcctcattgagcagctgacagctaagcaagtcagttctaattttagcctataaacttcaatatgctttttgtcacttgtaattcctattaaccacaatttttcttttgtttggtaggctcaagctgaaggcctaatcgtggatgttcatgccaaagaaaaggaattggaaaggttgaataatttacataaaaatcttcaaagtcgtaacaatgatggtagtgtagcacgaaatccattcagggctgtgcatgaagattctgatgccaaagctgttcggcgaccctatcaatttggtcttagaaccgaagggctgaaaaggttgatgattcttaggtctgcttttgttctctatattttggtacttcatattgttgttttcataaagctctcggtttcaaagcagtaagaaacttttgttcccatataaagaggaactatgtttctgatattaacgtgtgactattttcctatgtatttagttctaaaaatgtttatccccatacaaaggatctttgtttctactatcaaacatgcaagtacttgcaggatgtataaatcaagaagcgtcgtagcctcttccagcttc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0108400, RefSeq:Os09g0108400