BGIOSGA003280

From RiceWiki
Revision as of 10:49, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003280| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA003280, complete gene.| tag = OsI_014...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA003280

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003280, complete gene.

LocusTag

OsI_01433

Ensembl Transcript ID

BGIOSGA003280-TA

Ensembl Protein ID

BGIOSGA003280-PA

Length

2852

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:11090686..11093537

Sequence Coding Region

11090686..11090809,11092090..11092244,11092358..11092540,11092922..11093274,11093369..11093537

Genome Context

<gbrowseImage1> name=IndicaChromosome01:11090686..11093537 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:11090686..11093537 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTCACCGGCCGGGGCGAGCAGATGGTGTGCGTGACCGGCGCCGGTGGCTTCATTGGGTCGTGGCTGGTGAAGGAGCTCCTCCACCGCGGATACTTCGTGAGGGGAGCCATGAGAGAACCTACGGACATCAAGAATGCTCATTTGCATTGTCTGGATGGAGCTAGAGAAGGCCTGTCCCTCTACCGAGCTGATGTGCTCGACTGCAGCAGCCTTCGTGCTGCGTTCGCCTTATGCGATGGCGTTTTCCACGTGGCATCGCCGGTCTCAAATGACCCTGAACTTCTGCCAACTGCTATCGAGGGAACCAAGAATGTCATCAACGCTGCTGCGGACATGGGCGTCAAGCGTGTGGTGTTTACTTCGTCTTATGGTGCTGTCCATATGAACCCTAACAGAAGATCTGACCAGATTGTTGATGAGAGTTGTTGGAGTGACCTTGAGTTCTGCAAACAAACACAGAACTGGTATTGCTACGCGAAGACGGTGGCCGAGAAGACGGCGACGGAGGAGGCGTCGAAGAGAGGTGTGCAGCTGTTGGTGGTGGTGCCGGCCGTCACCGTGGGGGAGATGCTGCAGCCGACGCTGAACGCCAGCGTCTACAGGGTGGCCACCTACATGAGGGGCACCAAGAGTGCGTACCCGAACGCCGTCGCCGCGTACGTCGACGTGCGCGACGTCGCCCGCGCGCACGCGCTGGTGTACGAGCACCCCGACGCGCGTGGCCGCTACCTCTGCATCGGCAGCGTGCTGCACCGGTCCGAGTTTGTTCGCTTGCTCAGGGAGCTCTTCCCCCAGTACCCTATCACCACCAGGTGTGAGGATAACAGTAAGCCAATGGTGAAACCTTACCAATTCTCTGTACAAAGGCTGAAGGCTTTAGGCATGCGGTTCACTCCTTTGAAAGAGAGCTTGTACGAGACAGTGATAAGCCTACAGGACAAGGGTCACCTACCAGCAATCTCACACCGTTCAGCCCTGTGA</cdnaseq>

Protein Sequence

<aaseq>MVTGRGEQMVCVTGAGGFIGSWLVKELLHRGYFVRGAMREPTDIKNAHLHCLDGAREGLSLYRADVLDCSSLRAAFALCDGVFHVASPVSNDPELLPTAIEGTKNVINAAADMGVKRVVFTSSYGAVHMNPNRRSDQIVDESCWSDLEFCKQTQNWYCYAKTVAEKTATEEASKRGVQLLVVVPAVTVGEMLQPTLNASVYRVATYMRGTKSAYPNAVAAYVDVRDVARAHALVYEHPDARGRYLCIGSVLHRSEFVRLLRELFPQYPITTRCEDNSKPMVKPYQFSVQRLKALGMRFTPLKESLYETVISLQDKGHLPAISHRSAL</aaseq>

Gene Sequence

<dnaseqindica>1..124#1405..1559#1673..1855#2237..2589#2684..2852#ATGGTCACCGGCCGGGGCGAGCAGATGGTGTGCGTGACCGGCGCCGGTGGCTTCATTGGGTCGTGGCTGGTGAAGGAGCTCCTCCACCGCGGATACTTCGTGAGGGGAGCCATGAGAGAACCTAGTGAGTTCGTCCACGTACGAGAACCACTCTTGCGAAAGCATCTAGTTTTGGACATCGATACAGTTTTTAATGTATGAGCTAAATCAGTGGTGTAGGCACAGGAATTTTTCTTGTATAGTCCTCACTAGTACGAATATGATTTATGTATGCGGTCAAATCTGATTTTCGCAGGCAGCTCGGTGACCCGCATGCATCAGGTGTTTGCGAAAGTCGGATTTTTTCATGCGAGTAGAGAAACTGCATACGAAAATAAGATTTTTCACATACGGACACTTAAGTCGTCCGACTACGAAAGGAGAAATCGAAAAGAAATTCAAAAATCATAAAACCCTAACTCTAGAAGTTGCTTGAAGCCATTGGTGCAGTGATCCGTGTGGGAGGGGGAGGGGGCATCGGGTCACCGCCGCCAGAGGGATCCTTCTCGCTCGAGCCCACTACCAAGCCCGCCGCCTCGCCTACCGTCGCCTCCACGGTGGAGCGCATTGACAGATCCGCCACCACCGAGCTACCCACCGTAGGATCCATTGTCGTTTCTCTCACCCGAGCCACCCACCGCCGCCCTCCCCCTTGCCCACCCCGTCGCCTGAGCCACCCACTGCCACCCTTGCCTGCGGACCTCGCATCAATGAGGTGGAGTGGCTTGTACGGGGGAGAGGGAGTGGGAGGAGTGGGAGAGTTGATGAGGATTTGGAAAAGTGGGGAAAAGAGAAGAGCCACCCAGACTTAGTGGTAAAAGAGGGAGGAGGGGAGAAAAAGAAATGTGAGGAAGAGCGGGGTGTATTTTCGTATGCAGACCACTTAAGAGGCCGTATGCATAGGAATATTTTCGTATGCGTACCTATTTAAAGATTCGCCTGTGAAAATTATTTTTCGCATGCGATCCTTGAATCGTACTTGGGGAAACGATTTTTATAGGCGGGAGCAGTTATGGGCCGCCTGCAACTGAAAAATCATATTTGTATAGTAGTGCCTAGTTCACAATTTACACTACATTCTAAAATTTTCGAACATACAGTGTAAATTCCATATGCAAGTACAAATTTAATAAAAAAATACGATAGAAATATAGTAATAATATCTTATAACATCCATAAACGGCTAAGAAAGTTCGAGATGAGTAAATATTATGATATAGCTAGTTCAAATCCAAAACATCTTACACATAAAAGGAAAATTAGGAATCCCGGCCCCAGCTTTATTTAACGCTTGAACTTCATGCGTCTAATATAGAAATTTCAAAAGATATTGATGTGAAAGGTTTATTAAATTGTCTCCCTAAGCGGACATCAAGAATGCTCATTTGCATTGTCTGGATGGAGCTAGAGAAGGCCTGTCCCTCTACCGAGCTGATGTGCTCGACTGCAGCAGCCTTCGTGCTGCGTTCGCCTTATGCGATGGCGTTTTCCACGTGGCATCGCCGGTCTCAAATGACCCTGTTAGTTCCAAATTTCTGACTGTATTATTCTTAAAAATTCCGAATCTATATATTTTCTCGCGTGTTACTAAACATATATGATGACCGAATCGAATTATTAATTTCAAACGTAGGAACTTCTGCCAACTGCTATCGAGGGAACCAAGAATGTCATCAACGCTGCTGCGGACATGGGCGTCAAGCGTGTGGTGTTTACTTCGTCTTATGGTGCTGTCCATATGAACCCTAACAGAAGATCTGACCAGATTGTTGATGAGAGTTGTTGGAGTGACCTTGAGTTCTGCAAACAAACACAGGTCCACTCTCTATAGTGCCCCCCATTGGTTAGCCAATAGCCGATTATATGCACAAACGGTTTATTAGCGATCAAAAAGTAATTTACGTGTAAAACTTTTACTATATATGTGTCCTTAGTGATTTAAAAGCTAATATAAAAAAAATTGCGTTAAAAATATCTTAAAATTAGCTCCAAAATAATTCAAATTTCAACCGTGGCTTAATCTTTATACAGAAAACGATGATACTCCACCAATTATGTATAACCGAAGTAATAATAACCAGATAAATACACGCAACCAAAAGATCAGGAATAATTCAGAAAACAAAGTTGACAGAGATATACTATGTATACTTCAACAAGACAACAACTAATATAACTAATGTACAACTGCATGCAGAACTGGTATTGCTACGCGAAGACGGTGGCCGAGAAGACGGCGACGGAGGAGGCGTCGAAGAGAGGTGTGCAGCTGTTGGTGGTGGTGCCGGCCGTCACCGTGGGGGAGATGCTGCAGCCGACGCTGAACGCCAGCGTCTACAGGGTGGCCACCTACATGAGGGGCACCAAGAGTGCGTACCCGAACGCCGTCGCCGCGTACGTCGACGTGCGCGACGTCGCCCGCGCGCACGCGCTGGTGTACGAGCACCCCGACGCGCGTGGCCGCTACCTCTGCATCGGCAGCGTGCTGCACCGGTCCGAGTTTGTTCGCTTGCTCAGGGAGCTCTTCCCCCAGTACCCTATCACCACCAGGTAACTCTTGATGATCAATGTTCACAAATACCAGAAATGATAAAATGATAAAACATCTGCAAAAAAATAATCTTATTATTGTTAATTGATCCAGGTGTGAGGATAACAGTAAGCCAATGGTGAAACCTTACCAATTCTCTGTACAAAGGCTGAAGGCTTTAGGCATGCGGTTCACTCCTTTGAAAGAGAGCTTGTACGAGACAGTGATAAGCCTACAGGACAAGGGTCACCTACCAGCAATCTCACACCGTTCAGCCCTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003280