BGIOSGA003319

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Revision as of 10:49, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003319| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA003319, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA003319

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003319, complete gene.

LocusTag

OSJNBA0025P13.17

Ensembl Transcript ID

BGIOSGA003319-TA

Ensembl Protein ID

BGIOSGA003319-PA

Length

4016

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:11859855..11863870

Sequence Coding Region

11859855..11860000,11862683..11863052,11863124..11863282,11863373..11863524,11863663..11863870

Genome Context

<gbrowseImage1> name=IndicaChromosome01:11859855..11863870 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:11859855..11863870 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGCTGGTGCAACTGGGGCTTGCTGGTTTGAATGTGATGTCCAAGCTGACCATGGCCTCGGGCATGAGCCCCTATGTTCTCCTCGCCTACCGGAATTTCATCGCAGCCGCCTTCCTCGCTCCCATAGCATTCCTTGTTGAAAGAGCAACACTCAATCAGGTGCTCTACTTCGTGGGCCTCAAGTACAGCAGCCCGACGGTGGCGTCGGCGCTGAACAACACCCTCCCGGCGGTGACCTTCCTCCTGGCGGCGCTGCTGAAGATGGAGCCCGTCGCCGGCCGCGCCGGCCGGGCCAAGGTGGCCGGAACCGCCCTGTGCGTGGCCGGATCCATGCTCATGACGTTCTACCGGGGCCCCCTCGTCAGGACCCTGGCGTCCCCCGTCCACTGGCCCTACGTCCAGGGCACCATGGCCGCCGAGGCCGCCGCGCACGCCGGCGGCCACGCCGTCGTCCTCGGCGCCGTCCTCGTCATCGGCTCCAACGTCGCGTGGGCCATCTGGTTCATCATCCAGAAGAATCTGTCCAAGAGCTTCGCTTGCCCGTACACGAGCACGGCGCTGATGGCGTTGATCGCCAGCGTGCAGTGCGCCGCCATCGCGGGGGCGGCGGAGCGGAGGTTCTCGGCGTGGGAGCTCGGCCTTGACATCAGGCTCGTCGGCGCGCTCTACGCGGGGATCGTGGCGTCGGGGATGGTGTGCACGGTGATGTCGTGGTGCATCCAGGAGCGCGGGCCGGTGTTCGTGTCCATGTTCAGCCCGCTGATGCTCATCGTCGTCGCCGTCGTCGGCTGGGGCATCCTCGGCGAGAAGATACACGTCGGGAGTGTTATCGGCGCCGTGATCATTGTCGTGGGGCTGTACACCGTGCTCTGGGGCAATGGGAGGGACTTGGACGGCGCCGCCGTCGCCATTGCCAGCTTTCCCGGCGACGAGGAGATGAACGGCGTCGTTGGCGCGGACGACACGACAGGACGAGCCCCGCCCGACGGACAGACGCGGCATGACAGCAGTCAGCGGAAAGTAGCAGCATAG</cdnaseq>

Protein Sequence

<aaseq>MVLVQLGLAGLNVMSKLTMASGMSPYVLLAYRNFIAAAFLAPIAFLVERATLNQVLYFVGLKYSSPTVASALNNTLPAVTFLLAALLKMEPVAGRAGRAKVAGTALCVAGSMLMTFYRGPLVRTLASPVHWPYVQGTMAAEAAAHAGGHAVVLGAVLVIGSNVAWAIWFIIQKNLSKSFACPYTSTALMALIASVQCAAIAGAAERRFSAWELGLDIRLVGALYAGIVASGMVCTVMSWCIQERGPVFVSMFSPLMLIVVAVVGWGILGEKIHVGSVIGAVIIVVGLYTVLWGNGRDLDGAAVAIASFPGDEEMNGVVGADDTTGRAPPDGQTRHDSSQRKVAA</aaseq>

Gene Sequence

<dnaseqindica>1..146#2829..3198#3270..3428#3519..3670#3809..4016#ATGGTGCTGGTGCAACTGGGGCTTGCTGGTTTGAATGTGATGTCCAAGCTGACCATGGCCTCGGGCATGAGCCCCTATGTTCTCCTCGCCTACCGGAATTTCATCGCAGCCGCCTTCCTCGCTCCCATAGCATTCCTTGTTGAAAGGTACATTCATGACAATTGAAGTTTTCAATTTTTCTTTTTTGAAATTATACGGCAGACGCAGACGCACACACACCACTGTATACACAACACCACACTCACACCCCCACGACGAATGCATCTCCTAACACATGCTCTAAGAGATGTAAAACAGCGACATATCCGTGATTTGACTAAAGTCTTGTTGAAAATCCACCTTCATGTGCGTAATATTCGTGAACACCAGGATTTAAACTCTGGTGGGTGGAGTTATGCAACCACGGCTCCACCACCATATCAGTGGTGCTTCCCCAAGTTTTCAATTTTCATTGGCTTAAACATTTTACTCCCCCGTCCGAAATATAAGGGATTTTTTTTAGAGATGTAACACATCATAATACTACGAATTTGGACAAACCCCCTATCCAGATTCGTAGTATTAGAATGTATCACATCCCTCCGAAATTCCTTATATTAAAAGACGGATGGAGTATTACTCTTGATATATAAAGGATTTTGAAGGGATATGACACATCCTAATACTACGAATCTGGACAGATTCCCTATCCATATTCGTAGTATAATTATGATGTGTTATATCCTTCCAAAATTTCTTATATTAAGAGATGGAGGAAGTATTACTCTTGATATATTGGTGTAATTGATACAATATATACTTCCCTACTATCATAGCATAGTGGAGATGTCAACTCTCAGACTTGCCACTCCATAAGGAGTGGAACGTAAATAAGACACTGATATATGGGCTAGGATCCCTATGTATATCGTTAGTGCCACTTTTGAGTGGCCACTATGATTCATTTTGCTAGTTTATTTCCTTCTGTCGTGGTATTCAATACATTTTTGTCTTTTTTACTTCCAGTCTTCCACCGACATATACTAGCTTTTATAAATTTATATTTTGCAAGTATTTAAGTAAAATGATCTATCCTGTAATCTTCATGTATCCAAAATGTTATTTTTTAACACAAAATTTGAATGTTACATAGATTCTAAACCTGGTGATGTAGTCTTCAGATATATCCAACTTTAATATTCAAAGTGAAACGAAATCATTACATATAATTACTTAATATTGTCATTTACCTGTATAAGTCCACTTTCATATATGATGTATTCAATTCCACTGATTATCTAAATGACCTATATCTGTATAATGATGTATTCAATTCCACTCATTTACCTGTATATCTTTCAATGTACAACCAAAACCATGTTGACTTTTAATGCCATTAATTCAAAGTGGTAAACTGAGTTTCTTGTGTGATTGCAGGAAAACTTGGAGGGCAATTAGTAAGAAGATATTATTCCAGATATTCATATGCTCCAGCATTGGGTGACTATTTCCTTTTATGTACTTCAATGAAGTTATTTGATCCAGTTCCCCTTCCTTGGATAATAGTAGCATTAACTAATCAGAAGGATGCTATGTAATTCCATAATTTTAAAGATTGAGTTAACTGGGGCTTATACCAAATTTTAACCACTGCTCCTAAGTTACACACACACACACACACACACACAATTGAACCATAGCGAAAAACAATATATATGAAAAAGATATTCTTCCACTACTCCGATTAAGATGAAATAAATTTAGCACACATGTATGCTCCCTTCAATTCCAAATGTAGATTGTTTTTGTCTTGTGAAAAAAGAATTAAAAAAGACTCTGAATTCAAATAAATTTGTTCTCCTTTATATTATATTTATGCTGCATTATAAAGATGAATCATTATTTGTGTGATAAATATTATTTATTAGCAAGGAAAATATGGGGTAAAAGATAAAAAGGTGCATACAATAGTTCTTAAATGACTTACATTCAGTAAAGAGCTGAAAAATAGAGAACTGTAACGGTATTTGGACCGGGATGGTGTACTTGTGTATAGTTTTATGTGACAAAATTGCACAGTTGGGATTTCGATTTACTGGAATGGAATTGTTTTTTTTTTTAGTGGAATGGATCTGTTGACTAGCATAATTAACTAGAAATATTTTTGGGTTTTACTCCAAATGGCGTTTCAACCAACCATCATTGTATCCACAAATAAGTTCACTAGTATATAATTATAAAAAGTACTGGCCAAATTATAAGTGTGTATGAAAGAGAATGGATGCAAATTGTTAGTAGAAACTAGAGTCATTAAGTTTTATTCTAATTTTGGCTGGAATTTTAGATAGAGGATATATAGATTGAAGTTTTTTTTTTTCAGATTATTAATCTGATTATTTACTCTACGGTTTGAAAACTATATTTTCTCAAAAAATATCTATTATTTTTTGTTTAAATAATTTGTTTTAAGCTATTTATTAATAACAGTCCGCTCAATAATTTATTTCAAACCGAGCTACAAGCTATTGGGTTAAGGTTTCTTCGACAAGGCAGATTGCCTATGCTTTTTCGCAGCGCACAAAACAAGAACATCACAATTAATTGAGTATTAACTATCACAAACTTAAACAAATCAGTTTATTTAATTTTCTCAAAACACACTGTCTAGCAATTTGAGAAACGTCCTAACAAATATAAATATAAGAAAGTTGCTCTTTCAAATTGCTAAAATGAACTCAACCGAAGTGTTCCTGTATATTTTGACTGTCTACACCTATTTTAAGTCAGTCGACACGTACGTCCATTCTCTACTCCAAAATAATATCAAAACATATAATGTCCCTTGGCAGAGCAACACTCAATCAGGTGCTCTACTTCGTGGGCCTCAAGTACAGCAGCCCGACGGTGGCGTCGGCGCTGAACAACACCCTCCCGGCGGTGACCTTCCTCCTGGCGGCGCTGCTGAAGATGGAGCCCGTCGCCGGCCGCGCCGGCCGGGCCAAGGTGGCCGGAACCGCCCTGTGCGTGGCCGGATCCATGCTCATGACGTTCTACCGGGGCCCCCTCGTCAGGACCCTGGCGTCCCCCGTCCACTGGCCCTACGTCCAGGGCACCATGGCCGCCGAGGCCGCCGCGCACGCCGGCGGCCACGCCGTCGTCCTCGGCGCCGTCCTCGTCATCGGCTCCAACGTCGCGTGGGCCATCTGGTTCATCATCCAGGTACAAACAACTTAATTTGATGATCATGCGGCGGGAAATGGTGAATGGATTTTAATTCGTGGTGTTCGCAGAAGAATCTGTCCAAGAGCTTCGCTTGCCCGTACACGAGCACGGCGCTGATGGCGTTGATCGCCAGCGTGCAGTGCGCCGCCATCGCGGGGGCGGCGGAGCGGAGGTTCTCGGCGTGGGAGCTCGGCCTTGACATCAGGCTCGTCGGCGCGCTCTACGCGGTAATATTAAACTATGCAGAGTCAGTCAGTACGTCCTAGCACGACATGAGAGGGAACTGATCGAACACCTGTGTATATATAAATGGGCAGGGGATCGTGGCGTCGGGGATGGTGTGCACGGTGATGTCGTGGTGCATCCAGGAGCGCGGGCCGGTGTTCGTGTCCATGTTCAGCCCGCTGATGCTCATCGTCGTCGCCGTCGTCGGCTGGGGCATCCTCGGCGAGAAGATACACGTCGGGAGGTAGGCGCGTGCGCGGTCGATCATGATTGATCATCGTTGTGTTCTTGATGAACAGATTACTCTGTAATTACATGTCGATTGTTTGCTCACAACTCTGTTGTAATCCTTGCTTATTGTGGCGGCGTGGTGCGTGTGCAGTGTTATCGGCGCCGTGATCATTGTCGTGGGGCTGTACACCGTGCTCTGGGGCAATGGGAGGGACTTGGACGGCGCCGCCGTCGCCATTGCCAGCTTTCCCGGCGACGAGGAGATGAACGGCGTCGTTGGCGCGGACGACACGACAGGACGAGCCCCGCCCGACGGACAGACGCGGCATGACAGCAGTCAGCGGAAAGTAGCAGCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003319