BGIOSGA003321

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Revision as of 10:49, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003321| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA003321, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA003321

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003321, complete gene.

LocusTag

OSJNBA0025P13.26

Ensembl Transcript ID

BGIOSGA003321-TA

Ensembl Protein ID

BGIOSGA003321-PA

Length

2899

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:11898811..11901709

Sequence Coding Region

11898811..11898986,11899911..11899973,11900730..11901261,11901353..11901709

Genome Context

<gbrowseImage1> name=IndicaChromosome01:11898811..11901709 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:11898811..11901709 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGAGGGAGAGCTTGCCGACGCTGGCCATGGTGATGGTGCAGCTGGGCTTCGCCGGCATGAATGTGGTGTCCAAGCTGGCGCTGGACACCGGCATGAGCCCCTACGTCCTCATCGCCTACCGCAACATCATCGCCGCCGTCTTCCTCGCCCCCTTCGCCTACTACTTCGAGAGGAAGAGTGGCATGGTGATCACCAAGAAAGTACTTGTCCAGATATTCTTCTCCTCCATTTTTGGCGCGACGCTGAACCAGGTGCTCTACTTCGTGGGGCTCAAGTCCACGACGCCGACGGTGGCGTGCGCGCTCAGCAACACGCTCCCGGCGCTGACGTTCGCGATGGCGGCGGCGTTCCGGATGGAGTCGGTGCGGCTGAGTGCGGCCGCCGGGCAGGCCAAGGTGTTTGGCACGGTGGTCTGCGTCGGCGGCTCCATGATCATGCCGTTCTACAAGGGCCCGCTCCTCAGGCTCTGGGCGTCGCCCATCCACTGGCGGTTCGCGGAGAGCGCCGCGTCGGGCGCGGCGGCGCCAGCCGCGGGCGGCGCCGCCGTCCTCGGCGACGTCCTCATCATCCTCAGCTGCGCCGCGTGGGCCGTGTGGTTCATCATACAGACCAAGATGTCGGAGCGGTTCTCGGCGCCGTACACGAGCACGACCATCATGTGCTTGATGGCCGGCGTGCAGTGCGCCGGCGTCAGCGCCGCCATGGACAGGAGCGTCGCCGTGTGGAAGCTCGGCTTCGACATCCGCCTCTACTCCGTGCTCTACATCGGCGTGTTCGGTTCGGGGATCGCGTTCGCGCTCATGTCGTGGTGCATCCAGGTGCGCGGCCCGCTGTTCGTGTCCATGTTCAGCCCGCTGATGCTGGTGTTCGTGCCCATTGTCGGCTGGGCGATCCTCGACGAGAAGATACACGTCGGCAGCGCGATCGGGTCCGTGCTGATCGTCGCCGGGCTGTACATGGTGCTGTGGGGGAAGGCGAGGGAGATGGGCTCGCCATCGGACCTCGACGGCGGCGGCGGCGTGGTGGAGCTGAACGGCAAGGGCGCCGACGCCGCGACGACCTTGCCGGTGTTCTGCACCACCACCAACAAGCACGAGACGACCCGGAACGGCTGCAGCAACTGA</cdnaseq>

Protein Sequence

<aaseq>MGRESLPTLAMVMVQLGFAGMNVVSKLALDTGMSPYVLIAYRNIIAAVFLAPFAYYFERKSGMVITKKVLVQIFFSSIFGATLNQVLYFVGLKSTTPTVACALSNTLPALTFAMAAAFRMESVRLSAAAGQAKVFGTVVCVGGSMIMPFYKGPLLRLWASPIHWRFAESAASGAAAPAAGGAAVLGDVLIILSCAAWAVWFIIQTKMSERFSAPYTSTTIMCLMAGVQCAGVSAAMDRSVAVWKLGFDIRLYSVLYIGVFGSGIAFALMSWCIQVRGPLFVSMFSPLMLVFVPIVGWAILDEKIHVGSAIGSVLIVAGLYMVLWGKAREMGSPSDLDGGGGVVELNGKGADAATTLPVFCTTTNKHETTRNGCSN</aaseq>

Gene Sequence

<dnaseqindica>1..176#1101..1163#1920..2451#2543..2899#ATGGGGAGGGAGAGCTTGCCGACGCTGGCCATGGTGATGGTGCAGCTGGGCTTCGCCGGCATGAATGTGGTGTCCAAGCTGGCGCTGGACACCGGCATGAGCCCCTACGTCCTCATCGCCTACCGCAACATCATCGCCGCCGTCTTCCTCGCCCCCTTCGCCTACTACTTCGAGAGGTACACGTACGTACGTATGTCTATATCGTTACGCATCGTGCTGCGCTCTAGCTAGCTACTTCCTTTCGTTCCCTCGACGATCGATTCCTTCCTTGTGTTTCTTGTTCTGATTAGTGAATATTATATTCATTCTTTCATGGTCTTTTTCTTTTCCCTTTGAATTCATTCATTCCTGCATGTGTGGGGAGTAGATTCAAAGAAATGTTTGTTTTTTTTTCAGATGGCAAAATAAATGATTCTTTTAGTGTCACTGGCATGTTTTGACTCTTGATTTGTTATACCTTCATCAGAAGAAAGAAAGGAACGGACTTTAATTCAGTACATCTCTGAGATGTCTTTTTCTCCTTATATCAGAAACAGGGCATGCACTCCTACTGTATTTAATGAAAATGACATAGTCTCATGCTGATTTCCCTTCAAAAAAAAAACAGGGGCAAAAATTAATCAATACAGGGTGTTCTCAATATTCATGTAACAATGCTACCAGTAGTTTCCTCTTGTAGAGGATGCTCTTCCTGACTTCTTGTCCTGTCGAGTTTGTTTTGCTCTGCGTGATTACGAAAGCAAGTCAAATTTTTGTTTTTTTGCGGCTAACCATTCAATTGGCATACTTATGGCTTCGCTGTAATTTCTAAATATATATTCTCCATGTGAATGTACTACACCTGGTGCCAACTGGGATTACAACCCCCAAGGAGAGCTTCATTAACTGGACTTACTAACCTCATTGAATGTCTTAAATGTTCATGCACTAAGCAACATATGAGGCTGATCTCACATAACCAGCTGTATCTAGCTCTTGCGTGGAATCAATCAATCAATTTAATAACCAAGATTTTGTTTGTTGGAAATGAATTAACCGTTTTGAATCAAGTTTGATATTAGTGGTTTTAATCAGTACTCAACCTACATGGATGCATGCAGGAAGAGTGGCATGGTGATCACCAAGAAAGTACTTGTCCAGATATTCTTCTCCTCCATTTTTGGGTAAGTACTCTCTCCATTAACCAGTTAAACATGTCACTGAATTAATCGAACTTGCAGCAATGATCTCCTGAATTAAAGGAAAAAAAGAAGAAAAATGAATCGCTAGCTAGGCTTGCCCATCAAAGGAGCCGATTTCTTGGAAAACTGTCTCTTTTCCCCTGAAGTTGAGATGGCCATGTTTGTGCACTCCACATGTGTTCCTTATTCTTCCAGGGATAGGGAACATGCTTATTCTGTGTCATGCCGTTGCCTCTCTAAAAAGAACGCTACCAATGGCGAACTGACAAACTGAATAAACTGTACTCTAGTTGATCACCACAACCCAACCAGGCCACTTAAAAGGTTGCAGCCAATGCAAAACTGATTAATTAATTAGCAGGTTAACTAATTGCTTTTTGGATGAAACCTTCATTTGTCCCGGAATTTTATTTCAATCCAACAAGTTATAATCTGAATTTGCAGTTTGGAAAGTGAATACAACTTACAGTTGCAGGGGTGTGACCCTGTTCTGTTCTGCCTCACCTGTTCTGACACTTTGCCGCGTTCAATCTTAGATCGACTAGCAAATTCAACTATATGTTGTGATCATGTTACTAGATTTTACCCATTTTTTACTATCCAGTCAAATAACGGCCAAACATATGTTGACAAGATCAAAACTTAGCACCAACGCGCACACATTTCGAAATGTTTATTTAGAAACTAATGTGATTTAAATAACCGCAACAGTTAATAATTTGGCATGTACGTGTGCAGCGCGACGCTGAACCAGGTGCTCTACTTCGTGGGGCTCAAGTCCACGACGCCGACGGTGGCGTGCGCGCTCAGCAACACGCTCCCGGCGCTGACGTTCGCGATGGCGGCGGCGTTCCGGATGGAGTCGGTGCGGCTGAGTGCGGCCGCCGGGCAGGCCAAGGTGTTTGGCACGGTGGTCTGCGTCGGCGGCTCCATGATCATGCCGTTCTACAAGGGCCCGCTCCTCAGGCTCTGGGCGTCGCCCATCCACTGGCGGTTCGCGGAGAGCGCCGCGTCGGGCGCGGCGGCGCCAGCCGCGGGCGGCGCCGCCGTCCTCGGCGACGTCCTCATCATCCTCAGCTGCGCCGCGTGGGCCGTGTGGTTCATCATACAGACCAAGATGTCGGAGCGGTTCTCGGCGCCGTACACGAGCACGACCATCATGTGCTTGATGGCCGGCGTGCAGTGCGCCGGCGTCAGCGCCGCCATGGACAGGAGCGTCGCCGTGTGGAAGCTCGGCTTCGACATCCGCCTCTACTCCGTGCTCTACATCGTAAGTTGCGCCGACACGAAACCGATCGATCGAACCGATTGTCGTTGGTCTTTTCGGACGCGAGACCTGTTGATGATGATGATGGTTTCAGGGCGTGTTCGGTTCGGGGATCGCGTTCGCGCTCATGTCGTGGTGCATCCAGGTGCGCGGCCCGCTGTTCGTGTCCATGTTCAGCCCGCTGATGCTGGTGTTCGTGCCCATTGTCGGCTGGGCGATCCTCGACGAGAAGATACACGTCGGCAGCGCGATCGGGTCCGTGCTGATCGTCGCCGGGCTGTACATGGTGCTGTGGGGGAAGGCGAGGGAGATGGGCTCGCCATCGGACCTCGACGGCGGCGGCGGCGTGGTGGAGCTGAACGGCAAGGGCGCCGACGCCGCGACGACCTTGCCGGTGTTCTGCACCACCACCAACAAGCACGAGACGACCCGGAACGGCTGCAGCAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003321