BGIOSGA003333

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Revision as of 10:49, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003333| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA003333, complete gene.| tag = P0682B0...")
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Gene Name

BGIOSGA003333

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003333, complete gene.

LocusTag

P0682B08.20

Ensembl Transcript ID

BGIOSGA003333-TA

Ensembl Protein ID

BGIOSGA003333-PA

Length

1260

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:12144300..12145559

Sequence Coding Region

12144300..12144362,12144443..12144533,12144620..12144969,12145054..12145158,12145260..12145559

Genome Context

<gbrowseImage1> name=IndicaChromosome01:12144300..12145559 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:12144300..12145559 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTGCAAAGTTCTAAGCAACCACTGGAGCCAGGAGAGGCGAAAATTCTTGAGAACAGAAAATCAAAGAGATCCAAACATGAGTAATGGAGAACTTGGTCCAAGATCTCGGGAAGCAGAAATCGAACAAAGAAACCCGTTCTTGCGTGGTCTCGAGAATGGCCATGTGAAAAGGAGGAGAACTGGCGATGTTCGACTGAAAGAGACCGAGTCGGAGCAGGAGGAGCACTCACTATCACTTTCTCAGCACTCTTCACCATCCCAATCTGATCAGGAGCAGAATGGAGCTCAGAAGCTTTCGGCATCTCCTAACGGATCAATCTCAGCCCTGCAACCGTTTGTTCACCTCAACACCAATGGCACTCTGAGGGCTGCTGGAGGTGTGTCACCGAGGACCCTGAAGACGGATCAGTTCCTCCGCACCATTGCTCCGCAGCAGCGGCATGAAGTGCAGTTCCTAGCAGCTGAACCCAAGCTGCACCACCGCCCGCCTACTCCACCCCTTATCGGCGCAGAGGTTCATGGGACTATCGATGGAGCTTTCGATTCAGGGTACCTCATGACCGCTGTCGTGAATGGACAGCTCTTCAGAGGCGTCCTTTTCGCTCCTGGTCCGGGAGTAACGGCTCCGAGACCGACGTTGCACCATCCGATTCTGATGAGCTCGGCCATTCCCCCGCAGCAGCAGCAGCAGCGCCCGGTGCTCGCCCACGCCATCCCGGTTCATGCCCGGCCCGTGCCACAGGCGACGGGCTTCGTGCTGCCGGACTGCAGCAACCATGCCCGGCAAGCATTCCCGGCGTCTGCAGCGGCGGCAGCGGCGAAGATCATCAAGTCTGAACCGGAGAGGGGCGGCAGTGACCTGCACGATGTTGTGCTCACGCTGGGAGGGCCTGGAGCTGGCAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MCKVLSNHWSQERRKFLRTENQRDPNMSNGELGPRSREAEIEQRNPFLRGLENGHVKRRRTGDVRLKETESEQEEHSLSLSQHSSPSQSDQEQNGAQKLSASPNGSISALQPFVHLNTNGTLRAAGGVSPRTLKTDQFLRTIAPQQRHEVQFLAAEPKLHHRPPTPPLIGAEVHGTIDGAFDSGYLMTAVVNGQLFRGVLFAPGPGVTAPRPTLHHPILMSSAIPPQQQQQRPVLAHAIPVHARPVPQATGFVLPDCSNHARQAFPASAAAAAAKIIKSEPERGGSDLHDVVLTLGGPGAGK</aaseq>

Gene Sequence

<dnaseqindica>1..63#144..234#321..670#755..859#961..1260#ATGTGCAAAGTTCTAAGCAACCACTGGAGCCAGGAGAGGCGAAAATTCTTGAGAACAGAAAATGTGAGTACCTAACTTTCTTATGAGTAGGCTTGATGTTAATTTCTTCCGCAAAACTTAATATCATGAATGGGATATTACAGCAAAGAGATCCAAACATGAGTAATGGAGAACTTGGTCCAAGATCTCGGGAAGCAGAAATCGAACAAAGAAACCCGTTCTTGCGTGGTCTCGGTAAGAAAATATCTTACAAAACTAAAATGTAGAGTTGTCATTGTTATGTTTACATCCAATGGCTACATCGTTTACGTTCTTTTCAGAGAATGGCCATGTGAAAAGGAGGAGAACTGGCGATGTTCGACTGAAAGAGACCGAGTCGGAGCAGGAGGAGCACTCACTATCACTTTCTCAGCACTCTTCACCATCCCAATCTGATCAGGAGCAGAATGGAGCTCAGAAGCTTTCGGCATCTCCTAACGGATCAATCTCAGCCCTGCAACCGTTTGTTCACCTCAACACCAATGGCACTCTGAGGGCTGCTGGAGGTGTGTCACCGAGGACCCTGAAGACGGATCAGTTCCTCCGCACCATTGCTCCGCAGCAGCGGCATGAAGTGCAGTTCCTAGCAGCTGAACCCAAGCTGCACCACCGCCCGCCTACTCCACCCCTTGTATGGCACTCTTTTCACAGCACTCTTCTTCCAACTCTGGCGTGCCATATTGTTCATGTCTCTTGATGAATTGCTTGTCTACAGATCGGCGCAGAGGTTCATGGGACTATCGATGGAGCTTTCGATTCAGGGTACCTCATGACCGCTGTCGTGAATGGACAGCTCTTCAGAGGCGTCCTTTTCGCTCCTGTAAGCAATTCGCATCCGAAAAAGCTAATTGCAGATGATGATACACATTGTTCATCCTCGCATTCTCATGACATTTCCCGCCATTCCTACTTCCATATCAGGGTCCGGGAGTAACGGCTCCGAGACCGACGTTGCACCATCCGATTCTGATGAGCTCGGCCATTCCCCCGCAGCAGCAGCAGCAGCGCCCGGTGCTCGCCCACGCCATCCCGGTTCATGCCCGGCCCGTGCCACAGGCGACGGGCTTCGTGCTGCCGGACTGCAGCAACCATGCCCGGCAAGCATTCCCGGCGTCTGCAGCGGCGGCAGCGGCGAAGATCATCAAGTCTGAACCGGAGAGGGGCGGCAGTGACCTGCACGATGTTGTGCTCACGCTGGGAGGGCCTGGAGCTGGCAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003333