BGIOSGA003359

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Revision as of 10:50, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003359| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA003359, complete gene.| tag = P0551A1...")
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Gene Name

BGIOSGA003359

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003359, complete gene.

LocusTag

P0551A11.33

Ensembl Transcript ID

BGIOSGA003359-TA

Ensembl Protein ID

BGIOSGA003359-PA

Length

5456

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:12740526..12745981

Sequence Coding Region

12740526..12740594,12741480..12741518,12741657..12741829,12742556..12742772,12743006..12743176
,12743269..12743429,12743513..12744557,12744808..12744954,12745035..12745262
,12745351..12745508,12745612..12745981

Genome Context

<gbrowseImage1> name=IndicaChromosome01:12740526..12745981 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:12740526..12745981 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAACAGCGGGAGGCGCGGCAGGAGGAGGAGGAGGAGGAGCGCGACGCGCCGGCGGTTCCTCCCGGGGAAAACGACGAGGAAAGAGATCGAAACCTATCCTCTCGTGTGGTTTCTTTGTTATTTGGTGGTGATATCTCAGCGCAGACATTCGAGAAATGGGTATCATTGGTACGTAAACGAAGTGGGGCATTCCGGCCATCAGGGTTCCCACGCCGGAATTCGAGGATTGAAGTCATGCCGAGTGGGAGTTTCTCACTTTTCAGTGCAGCAGACTTAAGTGAGCAAGTGGTTACAGCAGAGCTAATAGGCAAAGAAGATATACCATTGACAAGCAGTCAGCCTACAGAAATAAGTTTGTGGGAGAGACTTGGAAATGCTTCTGCACTAGATATTGAATCACCTGACTTTTCATGGAATATGCTGTCATCTCTGCACCATACAGAGCATAGTAGTAGTTCGGACCACTCTGAAGATGAAATGTGCAAACCTCTTGAGGTGACTGTGAACTCTGGTGGTGTAGTGTTCTTTGCTCTATTTAATTCTTCAAGTAATGTCTTACCAAAAGAAGCAGCTGCTGTTATAAAGTTCTCATCATCAAAGATGTCAACTCAGGCAGAACGGTTGGGTTATGAATTTGCTAGATTGCTTGGAGTTCAGACACCACAAGCTAGAGTGGTACACAATTCTAGCCTAGAGTGGCAGGATATTAGAAAGGCTGCAGAAAATGCACGATCAGTAGCAGTTTCAAATAGTGATGAGGTTGGTGAGATGACATGCTCAGAATTGTTGGAAGCTCTTGAGCTAAGCCGTTGTCTTCTTCTAATGAGTTATATTCATGGATCTCCCCTTCTTGAGAGTTCAAAGGCATTTAGTCCACGGGAAGCTGCTTGCGTTACTGCTTCATCATTGGGTAGGGTCTTGATGCTAGATCTGATACTCAGAAATGAGGACAGACTCCCATGCCGTCAGCTTGGTTGGCGTGGCAATCCTGCAAACCTGATGATTTCCGATAGACCTTCTGCACCCAGTGTGGACAGATTGGATGATTCCAAGTGCACTACAGAAAGTTCTATTCCAACGATTACTCAATTGGTGCAGAGTGACAAGCGGACTCACACTGCAAATGCAACCATAAATTCTCCAGAATTGGTGTCCATGTCACCAAAACCAGATGCATTGAAAAGTGTAAGAGGAAATGCTGATAGTTTGGATGGCCCTGTCCACATTGTAGCAATCGACACTGGAGTGCCACGTCGCCCCCCTGCAGGGAGACGGGTGAAAGATCATGAGCGATATCCCAAAGTTGTGCAGCTTATGTTGAATAATTCAGATTATTCCTCGAATATATTGTATGAGATTTCTGGTGGTAAGCTAGGGACTCCAGGACCTGATGAAGCAATCGCTTTCACTGATTCTTGTTGTTCCATTTCTGATGAAGACAATACTGCTGCGATTCATGAATTCCGAGGGGCATTTCGTGCAGCTCTGAGGGATCTTGAGGGGTTCCATCTATTTCTTCTCCAGCTATACCAAAAACTAGATGGTGTTTTGCGAGTTTTCTTGTCCATAGTTACTAAAGGCTCTGAAGAATCCGACAACAATGATGCTACAGTTCCTGATTTTCCATCACCCGGTGCTAACTACAGTACTCCTTGCGCTCCTAGTAAGCAGCAGAATAGTGAATTGCACGGTGATTCTGAAATACTGAAATCAACGACAAAGCCTTCTTCTGCGGGATCCCGTGGAAGCTCAGACTCAGTATCTCCTCTGTCCAGGGAGAGTTGGAGTAATAAGTATTTCAAAGGGAGTGCAGAGGGTCCCCGAAGTTTAAGAATGACAATGAAGCTCCGTGATTTTTACAAGACTCCGAAGGTTGATCCTGAATTAGTCAAAGAAATAGAACAATGGAATGAGGCGCTTAAGTCTGATGTGATCAAATTTTGCGAGGAGAACAATTTTCATTCTGGATTTTTTGATGGCAATGAGAATAACATGGTAGCTGATGCATATGAATTGAAGGTGCGTCTAGAACACATCATTGAAAGGATAGCCTTGGTCTCTGACGCTGCAAATACCGAGCGACCTTCTCTTGTTATCAACAACTTGTTCATAGGTGGGGCTCTGGCTGCAAGATCTATGTACACCCTTCAGCATCTGGGCATTACCCATATACTATGTTTGTGTTCAAATGAGATTGGTCAATCTGATTCCCAATTTCCCGATCTTTTTGAATACAAGAACTTTTCAATTAGTGATGATGATGATGCAAATATCAGTGATCTTTTTGAAGAAGCCTCAGATTACATCGATCATGTAGATCATGTTGGAGGCAAGGTTCTTGTTCATTGCTTTGAAGGAAAAAGTCGGAGTGCCACAATTGTGCTTGCCTACCTGATGCTCAGAAAGGGTCTCACTCTTGCGAAAGCTTGGAACTTACTGAAGAAAGTGCATCGTCGGGCACAACCGAATGACGGTTTCGCAAAGGCTCTGCTAGCGCTTGACAGGAAGCTGCATGGAAAGGTGTCTATGGATTGGCAGCACAAGCGACCTGAGATGAAGGTGTGCCCAATCTGCAGCAAGAACGTCGGACTGAGCACTAGCTCACTCAAACTGCATCTGCAGAAGGCTCACAAGCGGCTATCTGCAGGTAGTGTGGACAGCGCCATGACCTTGGAGATTCAGAAGTCGATCCAGTCGCTCCGGATCAGCCGCGGTGGGAGCCTGAGCCCTTCTCAGAAGCTTACCAAGGCGTTCGCTGATGAGCTCAGCTTCTGA</cdnaseq>

Protein Sequence

<aaseq>MEQREARQEEEEEERDAPAVPPGENDEERDRNLSSRVVSLLFGGDISAQTFEKWVSLVRKRSGAFRPSGFPRRNSRIEVMPSGSFSLFSAADLSEQVVTAELIGKEDIPLTSSQPTEISLWERLGNASALDIESPDFSWNMLSSLHHTEHSSSSDHSEDEMCKPLEVTVNSGGVVFFALFNSSSNVLPKEAAAVIKFSSSKMSTQAERLGYEFARLLGVQTPQARVVHNSSLEWQDIRKAAENARSVAVSNSDEVGEMTCSELLEALELSRCLLLMSYIHGSPLLESSKAFSPREAACVTASSLGRVLMLDLILRNEDRLPCRQLGWRGNPANLMISDRPSAPSVDRLDDSKCTTESSIPTITQLVQSDKRTHTANATINSPELVSMSPKPDALKSVRGNADSLDGPVHIVAIDTGVPRRPPAGRRVKDHERYPKVVQLMLNNSDYSSNILYEISGGKLGTPGPDEAIAFTDSCCSISDEDNTAAIHEFRGAFRAALRDLEGFHLFLLQLYQKLDGVLRVFLSIVTKGSEESDNNDATVPDFPSPGANYSTPCAPSKQQNSELHGDSEILKSTTKPSSAGSRGSSDSVSPLSRESWSNKYFKGSAEGPRSLRMTMKLRDFYKTPKVDPELVKEIEQWNEALKSDVIKFCEENNFHSGFFDGNENNMVADAYELKVRLEHIIERIALVSDAANTERPSLVINNLFIGGALAARSMYTLQHLGITHILCLCSNEIGQSDSQFPDLFEYKNFSISDDDDANISDLFEEASDYIDHVDHVGGKVLVHCFEGKSRSATIVLAYLMLRKGLTLAKAWNLLKKVHRRAQPNDGFAKALLALDRKLHGKVSMDWQHKRPEMKVCPICSKNVGLSTSSLKLHLQKAHKRLSAGSVDSAMTLEIQKSIQSLRISRGGSLSPSQKLTKAFADELSF</aaseq>

Gene Sequence

<dnaseqindica>1..69#955..993#1132..1304#2031..2247#2481..2651#2744..2904#2988..4032#4283..4429#4510..4737#4826..4983#5087..5456#ATGGAACAGCGGGAGGCGCGGCAGGAGGAGGAGGAGGAGGAGCGCGACGCGCCGGCGGTTCCTCCCGGGGTGAGCCGAGCCCCATTTCCTCTTTTCCTGCTCGGTGCTGTGTGATCTGATCTGATCTGGGTTGTGACGCTTCGGTGCGGTGGCTCTTGGATTGGTGGCGAGCGGAGGCCGGAGGGTTTGGGGGGCGTAGAGTGAGGGCGCATGTCCCGATGTCCGGGAGGGATCTCGATCTGCCTCGGCGTCTCGGTTGGCGTTGGCTAATCTGAGTGGCGAGGTGGCGTGCGGAGATGAAATGCACTAGTAGTTTTGTTTTTTTTGGGGGGCAGATTTGCACTGCGTTGATTGAGAATCTTGCGATTCAGGCTGATGTGGTCCTCGTTCTTGCGCAAAACGCATTCTTTGATGAGAGGCGCAGCAACTTGTTGCTTCGTGCGATTCATTGGGGGGATATATTCCGCTTGGTACCCCCTGATCAAATCAATCCTAGCATTCTGTTGTACCTTCTGTTCAATCATGGGTAACATTTTTAAATGCTTGATCTCCTGATTCAATCAATGTTAGCATTCGGTTTTACTTAAAGTCTGTAGCTTCTGGCTCTGATAGAAAAGTCGCAGTTTGGCAGGACATGTGCCAAATTCAAGGGAACTTTTCATTGTAAGACATTAATTTTATCATTCCTCAAACCCATGCCGTTCAGAAGGTGCCAAAGCAATAGTGTTTTTCGTGTTAATAATGAATTCATCATGATTGCACTGCGTAGGTTGAGAATCTTGACAAGCTGATGTCCAAATTTTCGGTCTAGTTCAACTTAGAAAGTACCTTTGTATTTTTTGTCTCCTCTTACCATCAAAACCATAACCTGTGAATGGAACATGCTATCAGTGTGTTTTAACTATTTATTTCTGCATGAAACAAGAACATATAAGAGTTTTACATTTCTTGCAGGAAAACGACGAGGAAAGAGATCGAAACCTATCCTCTCGTGTAAGTGTCAATTTGTCTAATTACCTGTTGCCAGTTCTATTGTGTTGCTCATGTACATTTCCATACCGAATATAACCTCAGAAGCCCGGGTTACGGATCTACTGGATATCTTTTCTAAATTCCTGCTTGTGTTTGTAGGTGGTTTCTTTGTTATTTGGTGGTGATATCTCAGCGCAGACATTCGAGAAATGGGTATCATTGGTACGTAAACGAAGTGGGGCATTCCGGCCATCAGGGTTCCCACGCCGGAATTCGAGGATTGAAGTCATGCCGAGTGGGAGTTTCTCACTTTTCAGTGCAGCAGACTTAAGGTAGCTTAGCAAAATATATCAACAATCACTTGGAATTATTTGTGGAGTAGCACCTAATCGATTATCTGCAGTTAGTAGATTAAATTGTCTCATAATCATCTTATTAGGCATAACGTGCACTGCAGCGAACCTTCTCATATAAATGTTGATTACGTTCTAGTATACTTCATCTGAAAAGTCAAAGGACTAGCAAATATGTTGTGGACATATCTGTGATACAAGATTGAGTCTACTTTCCAGATTTCTCCAGTAGGAAGTTAATTGTCCACATCCATTGCAGTTGGCCACATTCTGTTTGTAATCCAAGATCGCATGAACACTTTTTCTTAGAGTTTTCAATTAAAACTGTCATAATAAACATTGATTAGGCATGATATGTAATATGCATATACTGTGCCTAGCAAATATTAATTCAATATGATATGTAACATTATACATTTATCAGTGAACATAGAAAACTATCCGTTAAAAGGTAGCATCCTCGCGCTTTACAAATTACCAGTTACATATGATGGCATCCTGTACTTTTTTATTGGTTATTATAATAATTTAGATTTACATTTCTAAATGGGAACTTGGATAGAAATATGAGTATGTATTAATTGCAATATTTGTCGGTTTACTTTAACTCCAGATGACATGCAATTTGGTAAATAATAAATGTTGACCTGGCCTTGTAAGTATGTTGAGCTAATGCTATTATTGTTTTGCAACTGCCCACTATAGTGAGCAAGTGGTTACAGCAGAGCTAATAGGCAAAGAAGATATACCATTGACAAGCAGTCAGCCTACAGAAATAAGTTTGTGGGAGAGACTTGGAAATGCTTCTGCACTAGATATTGAATCACCTGACTTTTCATGGAATATGCTGTCATCTCTGCACCATACAGAGCATAGTAGTAGTTCGGACCACTCTGAAGATGAAATGTGCAAACCTCTTGAGGTTTGTTGCTGCCTTCTGTTGGCAATTTTTACATTCTTTTTAGTTATTGCAAGAGAAAAATAAACAATCATTTACTTCCATACTATATTACACAAACATGATTTTTTTAAACATTTTTTAATTTTCATATTGGACATGCAAGACCATATTTATTTATCTGATATTCACTCCATTGGACCATCTTTATATTTCCATGCATTTGACATGATAGTTTCTGCTTGCTGTCTTTATAGGTGACTGTGAACTCTGGTGGTGTAGTGTTCTTTGCTCTATTTAATTCTTCAAGTAATGTCTTACCAAAAGAAGCAGCTGCTGTTATAAAGTTCTCATCATCAAAGATGTCAACTCAGGCAGAACGGTTGGGTTATGAATTTGCTAGATTGCTTGGAGTTCAGACACCACAAGTATTTTGCAAACTCCCAATGAATTATGCGCACTTTGATTATGATGTACCACAACATTTGATTTCTTATTCAGGTTTTTCTAACAACTGCAGGCTAGAGTGGTACACAATTCTAGCCTAGAGTGGCAGGATATTAGAAAGGCTGCAGAAAATGCACGATCAGTAGCAGTTTCAAATAGTGATGAGGTTGGTGAGATGACATGCTCAGAATTGTTGGAAGCTCTTGAGCTAAGCCGTTGTCTTCTTCTAATGAGGTACTACTATGATTAAATATGCATTTTCTTTATGGTAAACTGCATTTAGGAGGAGATATAAACTGTTACTACTGTATTGGCAGTTATATTCATGGATCTCCCCTTCTTGAGAGTTCAAAGGCATTTAGTCCACGGGAAGCTGCTTGCGTTACTGCTTCATCATTGGGTAGGGTCTTGATGCTAGATCTGATACTCAGAAATGAGGACAGACTCCCATGCCGTCAGCTTGGTTGGCGTGGCAATCCTGCAAACCTGATGATTTCCGATAGACCTTCTGCACCCAGTGTGGACAGATTGGATGATTCCAAGTGCACTACAGAAAGTTCTATTCCAACGATTACTCAATTGGTGCAGAGTGACAAGCGGACTCACACTGCAAATGCAACCATAAATTCTCCAGAATTGGTGTCCATGTCACCAAAACCAGATGCATTGAAAAGTGTAAGAGGAAATGCTGATAGTTTGGATGGCCCTGTCCACATTGTAGCAATCGACACTGGAGTGCCACGTCGCCCCCCTGCAGGGAGACGGGTGAAAGATCATGAGCGATATCCCAAAGTTGTGCAGCTTATGTTGAATAATTCAGATTATTCCTCGAATATATTGTATGAGATTTCTGGTGGTAAGCTAGGGACTCCAGGACCTGATGAAGCAATCGCTTTCACTGATTCTTGTTGTTCCATTTCTGATGAAGACAATACTGCTGCGATTCATGAATTCCGAGGGGCATTTCGTGCAGCTCTGAGGGATCTTGAGGGGTTCCATCTATTTCTTCTCCAGCTATACCAAAAACTAGATGGTGTTTTGCGAGTTTTCTTGTCCATAGTTACTAAAGGCTCTGAAGAATCCGACAACAATGATGCTACAGTTCCTGATTTTCCATCACCCGGTGCTAACTACAGTACTCCTTGCGCTCCTAGTAAGCAGCAGAATAGTGAATTGCACGGTGATTCTGAAATACTGAAATCAACGACAAAGCCTTCTTCTGCGGGATCCCGTGGAAGCTCAGACTCAGTATCTCCTCTGTCCAGGGAGAGTTGGAGTAATAAGTATTTCAAAGGGAGTGCAGAGGGTCCCCGAAGTTTAAGAATGACAATGAAGCTCCGTGATTTTTACAAGACTCCGAAGGTAAGAGTTTTCTATTTGCAATAAGATTGTTTATCTGATTGCATAACTATGCTCGTTTGTTAAGCAAACTTCAGTTTGGTTAGCCTGTCTTTGTTTTACTGGACAAAAGTAGTACCAACATTTAATGCAGCTTGCTTCAGAGTAGTTTCTATTGAAATGAATTGCCTAGTTCAACTGACTGCTGCGTGTGCCGATTGGCCTTTTTTTAGTTTATTCCAAACTCAGTTGCAACTACTATTTATTGTGACAGGTTGATCCTGAATTAGTCAAAGAAATAGAACAATGGAATGAGGCGCTTAAGTCTGATGTGATCAAATTTTGCGAGGAGAACAATTTTCATTCTGGATTTTTTGATGGCAATGAGAATAACATGGTAGCTGATGCATATGAATTGAAGGTGGGTCCTGATGTACTGGTATCTAAATATATAGTACTTCTGTTAAAGAAAAAATATATTCATAAATTACTAACTTGCAGGTGCGTCTAGAACACATCATTGAAAGGATAGCCTTGGTCTCTGACGCTGCAAATACCGAGCGACCTTCTCTTGTTATCAACAACTTGTTCATAGGTGGGGCTCTGGCTGCAAGATCTATGTACACCCTTCAGCATCTGGGCATTACCCATATACTATGTTTGTGTTCAAATGAGATTGGTCAATCTGATTCCCAATTTCCCGATCTTTTTGAATACAAGAACTTTTCAGTAAGAGCATCAATCAACCTCTGACATAGTGCATGTTCCATGATACTGAGTTCCACACTGAAATCATTCATCTTGTAATGTTTTACAGATTAGTGATGATGATGATGCAAATATCAGTGATCTTTTTGAAGAAGCCTCAGATTACATCGATCATGTAGATCATGTTGGAGGCAAGGTTCTTGTTCATTGCTTTGAAGGAAAAAGTCGGAGTGCCACAATTGTGCTTGCCTACCTGATGCTCAGAAAGTAAGAAATTTAACTTTGTAACTAGCAATCTTCCGTTGGCAAATTATGTGGTAATGTCACACAAGAACCTCACCCATGCCTGCTGACAAAACACTTATTTCAGGGGTCTCACTCTTGCGAAAGCTTGGAACTTACTGAAGAAAGTGCATCGTCGGGCACAACCGAATGACGGTTTCGCAAAGGCTCTGCTAGCGCTTGACAGGAAGCTGCATGGAAAGGTGTCTATGGATTGGCAGCACAAGCGACCTGAGATGAAGGTGTGCCCAATCTGCAGCAAGAACGTCGGACTGAGCACTAGCTCACTCAAACTGCATCTGCAGAAGGCTCACAAGCGGCTATCTGCAGGTAGTGTGGACAGCGCCATGACCTTGGAGATTCAGAAGTCGATCCAGTCGCTCCGGATCAGCCGCGGTGGGAGCCTGAGCCCTTCTCAGAAGCTTACCAAGGCGTTCGCTGATGAGCTCAGCTTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003359

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA003359&oldid=41083"