Os11g0479100

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Revision as of 09:10, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0479100| Description = Disease resistance protein family protein| Version = NM_001074425.1 GI:115485498 GeneID:4350508| Length = 8447 bp| ...")
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Gene Name

Os11g0479100

Description

Disease resistance protein family protein

Version

NM_001074425.1 GI:115485498 GeneID:4350508

Length

8447 bp

Definition

Oryza sativa Japonica Group Os11g0479100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:18578162..18586608

Sequence Coding Region

18578162..18578195,18578381..18580464,18581382..18581450,18584416..18585387,18585647..18585749
,18586526..18586608

Expression

GEO Profiles:Os11g0479100

Genome Context

<gbrowseImage1> name=NC_008404:18578162..18586608 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:18578162..18586608 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctagttctgaaggcaaggcggctgctacatctgaggccggggtgacggtggcggctatggcggaggcggcgtcagctagaggccccgctcgatttcgttcttgcccctgccagaaggaaaagcactgggaggggaataagtgcacatcaatggggattttctctggctggaaagcaagcaaggtggccaaagatgaggtgggcatgctacttggtgtctccgacgagatcaccaagctagatgaaaagcttcaatttctcaaggactaccttgctgatgctgaaaagaagcgcatcaccgacaagcatgttgacgggtgggtgaggaagctgaagggcatcatgtatgacgccactgacatcctagagctctgccagcttaaggccatggagcagggttcttcagttgacttgggctgttgcaaccccttgctgttctgcctacggaatccattgttcgcgcatgacattggcagccgtatcaagaagctcaaccagagccttgatagcatatgcaagacaggtgccgagtttagcttcatgaagctggaagcctatcaagatcgaaggactgcctctccgctcatcagtcgtacaacatcaccggtgttggagcggtcaggtgtggttggtgatcagatcgaagaggatacatcagcattggtgaagttgctaactgatgacaaggagaccattcatgcggagaacaatagcctgttgttagccatagtgggtgttggtggcattggcaagactactcttgccaagaacatcttcaatgatgatgccatccaggagaagtttgacaagaagatatggttgagtgtcacgcagaagttcaatgaacctgatctcctgaggagtgccatcattgccaccgggggtgatcaccgcagctcacatgacagatctgtgcttgagctaagccttctgaatgccatcaaggggaagaatttcattttggtgctggatgacatgtggactgaaagagcatggaatgacttcctccagataccattcagtcatggtggtcgaggtagccgagtcattgttaccacaagagatgagagaattgccaggggggtgaaagccaagtaccttcaccatgtcaacaaactaggatctgacgatgcttggtccctgctcaagaaacagggccgcttcagtattttcttaggattgaggtttttctacaccttagggtttctacttgtcccaagcaaagttatccttagtgagatagatgagcctgagattgaggcactaaaggatgtcggaatggagataataggaaaatgcgatggtttaccactcgctatcaaagtgctagggggcctcttgtgcagaagagatagaaaccatggtgtttggtcagagattttgagtaattctacatggtcagttgatggaatgccccaagacctaaactatgtgttgcacctgagctatgaagatctctctcctcatttgaagcaatgcttcctgcactactcacttatccctaaaaatgttgtccttggttatgataccattattggtatgtggatcagtgaaggacttgtacttcaatgcacaaaaggattagaagaattaggagaagattactacaaggagttgatcatgagaaatcttttggagccaagtatagagtatgttgatcaatggcactgcacgatgcatgatgttgtccgctcatttgctcattatgtggctagagatgaagcattggtggttcaaggtagacaaattgatattagtaatcttcattcacagaagttctatcgattatccattcaaactgatgatgaagtagagtggaatcttctaaaagagcaaatgtcactcagaatgttaatatcagtaagtgatatcaagctaaggcctggtgattcattgggcaacttttcaggtctacggatcttgtgtataaattcatcaaattttcttcctttggttgactctctgtgccaattgaagcacctaaggtacttgtccttggcaacagatgatatatctagattgccagatgacattggcaagatgaaattcttgatgtacattgacattaatgcatgtggaaatttggtgcaacttcctaagagcattttaaagctaagacagctgaggtatctaagccttggtgacacacatataaatgcaatacctgaggggttccataatctgtcaagtattcggaaattatatggttttccagctcacatgggcactggtggtgtttcgccaaaagagaattggtgtagtttggaagagctagaatgtctttctgagctcagggatctagacctaaattgtcttgagaatgtctctgccagctcttatgctgcaaaggcttcactttgcaccaaggagcatcttatcttcttaaaattacgctgcactagtagattgggagatgatgggttactcaaagaggaaggtttatctgagatggagcagcggcttgttgaggaggtgtttaatgagttctgtcctcctcgctgtttatacaatcttgaaatttttggatactttgggtgttcactgccaaattggatgatgtcaccaatatccagaacgcctcttacgagcttgaggtatctgtttcttaaagacttggcttgttgcacccaactacctgatattttgtctcagctccttcatttgttcatgctacaaattgttcgtgcaccggccatcaagcgtgtcgggtctgaattcctgctctgccatgatcatggccatcattccctgacggcgaaagcatttccaagattgcaagtgctattcttcgtggggatggtggaatgggaggagtgggagtgggaggaacaagtgcaagcaatggctgtcttggaggagcttttacttgagcgttgcaaactgaggtgccttcctcctggccttgccttccatgcaagggctctgaagaaactatggatatgtgaggtccagaacctcaagtctcttgataacttcgcttgtgttgttgagctcagtgtggatgacaaccctgatctgcagaggatatctaattttcccaaattgcggaagcttgacattatgttctgccccaaaatggaagtattggagaatgtgccagaactcagaatcctcacacttaaggactatagtattgaaacactccctggttatttgcagcaagtaagcatgaggaatttgttcgtggactgcagctttgagcttcttagttccatagccatgggagatacaggtcctgagtggaacaagatcagccatatccagcaagtgaaggctaattcagatgatggatacgatgaaacgatgtgctttgctgcatcagaaccaaatgatgagaagtag</cdnaseq>

Protein Sequence

<aaseq>MASSEGKAAATSEAGVTVAAMAEAASARGPARFRSCPCQKEKHW EGNKCTSMGIFSGWKASKVAKDEVGMLLGVSDEITKLDEKLQFLKDYLADAEKKRITD KHVDGWVRKLKGIMYDATDILELCQLKAMEQGSSVDLGCCNPLLFCLRNPLFAHDIGS RIKKLNQSLDSICKTGAEFSFMKLEAYQDRRTASPLISRTTSPVLERSGVVGDQIEED TSALVKLLTDDKETIHAENNSLLLAIVGVGGIGKTTLAKNIFNDDAIQEKFDKKIWLS VTQKFNEPDLLRSAIIATGGDHRSSHDRSVLELSLLNAIKGKNFILVLDDMWTERAWN DFLQIPFSHGGRGSRVIVTTRDERIARGVKAKYLHHVNKLGSDDAWSLLKKQGRFSIF LGLRFFYTLGFLLVPSKVILSEIDEPEIEALKDVGMEIIGKCDGLPLAIKVLGGLLCR RDRNHGVWSEILSNSTWSVDGMPQDLNYVLHLSYEDLSPHLKQCFLHYSLIPKNVVLG YDTIIGMWISEGLVLQCTKGLEELGEDYYKELIMRNLLEPSIEYVDQWHCTMHDVVRS FAHYVARDEALVVQGRQIDISNLHSQKFYRLSIQTDDEVEWNLLKEQMSLRMLISVSD IKLRPGDSLGNFSGLRILCINSSNFLPLVDSLCQLKHLRYLSLATDDISRLPDDIGKM KFLMYIDINACGNLVQLPKSILKLRQLRYLSLGDTHINAIPEGFHNLSSIRKLYGFPA HMGTGGVSPKENWCSLEELECLSELRDLDLNCLENVSASSYAAKASLCTKEHLIFLKL RCTSRLGDDGLLKEEGLSEMEQRLVEEVFNEFCPPRCLYNLEIFGYFGCSLPNWMMSP ISRTPLTSLRYLFLKDLACCTQLPDILSQLLHLFMLQIVRAPAIKRVGSEFLLCHDHG HHSLTAKAFPRLQVLFFVGMVEWEEWEWEEQVQAMAVLEELLLERCKLRCLPPGLAFH ARALKKLWICEVQNLKSLDNFACVVELSVDDNPDLQRISNFPKLRKLDIMFCPKMEVL ENVPELRILTLKDYSIETLPGYLQQVSMRNLFVDCSFELLSSIAMGDTGPEWNKISHI QQVKANSDDGYDETMCFAASEPNDEK</aaseq>

Gene Sequence

<dnaseqindica>8414..8447#6145..8228#5159..5227#1222..2193#860..962#1..83#atggctagttctgaaggcaaggcggctgctacatctgaggccggggtgacggtggcggctatggcggaggcggcgtcagctaggtttgggggcagccttccccacccacgccggcgtcgtccccttccccgtccccgtccccagcttagctggcgtcgtccccgtccacagccacgccaccgagccgtgctgtgtatatgcaacggagaggaagaagagagagatgagataggataaagggtattttagtcatctcagcaagaaaaaacactacaaaaatcattaaattgagaagaaatggataaaatggcattacaacatgttgcccctgtttgaggatggcattttaacgaaaccacttttgggagtggcattcgagcgaaaccccgttttgacaatggcaaaatgtcaattttctcatgacaaaacccttttcacttgagttctgcagaaccagtggcagcagcagccggcggcgagccatggcaagaagccagcaagccgctccgccgcctcacctcccgtcgtcctcgccgcgccgccgcctgccgtcctatggtacgtagcctcctcgcgcgcctcgaaccccctcgtacgtcacgacggctgtgccctcgctgcagggaggcccccccccacccgttcggcgaaatgcgcagctggagcgctttgcctcggcttgtactctggcgtcgatgccatgattatgtcggtctccatgggtgatgcattcccggccctgggatcctacccgcaaaagagctgctgtcccgcggtgggtaattggtttattctggttatcgagtacaaattcgattagctggtggtaatgatttgtttgtttctttccatgatgcagaggccccgctcgatttcgttcttgcccctgccagaaggaaaagcactgggaggggaataagtgcacatcaatggggattttctctggctggaaagcaagcaaggtatggaatccaacatcgatgcttgcacaacatgtcttttttgctttgctgatgtctcaagaaacggatcaaatttttttccatgtcagatagcagaaggcactcacatagcttgctaccttctgcagcactataaatacgttgttgctatcttccacaccactacacacaaatagcttacagcccttgtctgcgaacaagaaaaatggccgttgtcctagatgcttttgcgtcctacgtcagcgacctgctcttgcaggtggccaaagatgaggtgggcatgctacttggtgtctccgacgagatcaccaagctagatgaaaagcttcaatttctcaaggactaccttgctgatgctgaaaagaagcgcatcaccgacaagcatgttgacgggtgggtgaggaagctgaagggcatcatgtatgacgccactgacatcctagagctctgccagcttaaggccatggagcagggttcttcagttgacttgggctgttgcaaccccttgctgttctgcctacggaatccattgttcgcgcatgacattggcagccgtatcaagaagctcaaccagagccttgatagcatatgcaagacaggtgccgagtttagcttcatgaagctggaagcctatcaagatcgaaggactgcctctccgctcatcagtcgtacaacatcaccggtgttggagcggtcaggtgtggttggtgatcagatcgaagaggatacatcagcattggtgaagttgctaactgatgacaaggagaccattcatgcggagaacaatagcctgttgttagccatagtgggtgttggtggcattggcaagactactcttgccaagaacatcttcaatgatgatgccatccaggagaagtttgacaagaagatatggttgagtgtcacgcagaagttcaatgaacctgatctcctgaggagtgccatcattgccaccgggggtgatcaccgcagctcacatgacagatctgtgcttgagctaagccttctgaatgccatcaaggggaagaatttcattttggtgctggatgacatgtggactgaaagagcatggaatgacttcctccagataccattcagtcatggtggtcgaggtagccgagtcattgttaccacaagagatgagagaattgccaggggggtgaaagccaagtaccttcaccatgtcaacaaactaggatctgacgatgcttggtccctgctcaagaaacaggttcctctttttccatctttcatttgaagaactgttctttctttggttatttacccgtctctgtcctatctgtcttgttaaaatttgctgatacaaaataaagttacctttgtagggtaaaatggactactggaagatattatttctagaaatacacatggcaagtactatcggcgctagataactatgacacaaaccgtgttaatgttgacatgtagtgccaacgttcacctttacatctaaatatctaaaccatattgatgttgacattttgtttgacatggtctattagttgataatatgcttgacttcagttcatttccaaaaaaaataaataaaaatattgatgtaaaagttttgcaagctctataggtcaagatgaacaatatgcatgtccggacttcccactggatttattgtatggaaaaatatgcaatttatgaaagctctgttggttaagataagaatgatgataggcagatctggaattcacacacacacacacacacactattgtagcccataattttaagagcacctttttagggtgaacaaaaactacggggtcatgaagactttcgtttgtgttggagtccatcttgaagacattattctgcacgttgctacttgcaatgcaaactatatcatcccatgtgtgttccatagtttacaccacaaaatgccttcatctgacgctatgaagaatcaacagtgctaccattctttgcggatgatttttcagaaaaggtgtagttacagattttatgaacctaggtgcatatgcaccagcaatcttgaccatccataggcctgtgcagatcttacagcatgcatacttggcactagggtaaaatgtacctaccaagctttgttcccttatagtgagagcaggggttggtacatgatctaaaaaccaagaccaaaatatccttaaagtagtactccattggttctgttggacaataactcattactcactcaaaattccctcttgacccatgcacatggtaatgttagaagatagaaatcactcgattaagttatatcattaataatcattgttagcacttgattttttttttggcagttcacctcaaataatttcttctggtgattttgattccacatgagttcttataatcttttgtgatacatcaatttgtttaacaaaataatgccaacacgtatatataacaaatcgatatttcattttgtaattgtcaaattttttggtgaatgaagatataccgttcttgtaaatgtagatatactatattgaaatttcattgtatgtagatatatagatcaaagtttctttttgtaaaatgttattttggtaaattggcacatattgttttctatattacatttgtaggtataccatttaaatgtaaatctagctttatgtcattagttcaaatatgcatgacattttatttgaatttgaaatgtgtataaaaaaagcaccacaaaagtatcatgtgagtgtctcgtacctctttattggagtaatgtacacgtggcataatcttataatttttattattacgtcatatttttatttaaaaatgatatagatgcaatttttctcctcctaactattgtaatatccttccttcagtggatttcaggagaggtatcatttacaaatgtcatttagtaaaagatcaatttattaggtgcatgtaatgtagttgtatgaaaacaagtacgagtgcttatttctgaaaaaaaaaagggaccatgcaaagttgcacaccatgagatgaagaactcaaaacaacactaagaaaaataaagtaatattaattgtgtgtttaacatgaaagagagctataatctagttcaggggtaaagttggaaggctaggaagtgatgtcaaagtcacagtgacactatgtactaccttctttttatgcctttatagttagacttcacaagtacagagcaatgaacacttagtagcacacatcttggaacacatcaatggttcagattttaggtgcaaatgaaccttggttcacatatgcttttccctatatatatatatagaaatctccaaactcaataagaatgatcatttcctaaataatgattccatacatgatttgattaatcgatgaatatcttttgtcatgtattgatttgtaaatatcaattccttaaaagtatgagaaccattttattgtaaatcagaattagaaattcctgcaaatggagacataaatatatgctaattttgtttgagaaataaacattactgaagataactatttgccaatctttcttatagaaaatgtcctacaaacaaatgaatatgttgagttcaaaaacatttggaatcttctcttcaaagatattgtcgatggatgtttgcttgctattatatccatctgacatgatccaagatttgtgcgacggaaaaattatttatttgaaaatgggaggttgggtcgagctttcaaattgaacattaatttcccacgacgtcaaggcaacaaaaggtgtgtatataattgtacaatgcataaagaaagtacaaatcatcttgaccatccaacatatctaaaattgaaagcgatggtttagttttcttactgtgtacaaaaaagaaaggagaagataggtagagtacgaataagtagatgtatatgtgcatatttatgcatccagaagaacaaatagacttccagccaatatgtgacaatcaactgcatgggtgctgttgtggcttacaccttacaggatgcatgtctgctgccgtatgtaggtaggatttatttttaattaattaaacctggtagaaaaccaactaaataatgcttaaaattatatctgtagtactccaccagaccaccatatttaaaaatctaaattgcatggcattttagtatctatttttttagagaaaaatggcataggatctaaacttcttcggttgcgccgtttcttatgtctgatccagggccgcttcagtattttcttaggattgaggtttttctacaccttagggtttctacttgtcccaagcaaagtatgtacatgatcttcttaatcaagcttctcttactgatcagcaaactcccatggatcttaatatttatctttctgctgctaacagtgagcctcctatatataactactaggcaaggtgtaatagtactttcaataaaaaaaatcctgaggacctcacatgttactattatctggttgggaggtcttgttatttgggtgtcactcgtcctgacattttcatgtccagttcttattttgagtcattttgtttttcctcacactcacctccactataaccatcttctttgtgttctgtgttatcttcgcgggactatctctcattgtctttgctttcctcgctctacctctttatagtttcaggcttatttctgatgctactgggctagcgattcctatgatcgtcgttctctgtcagcttactatgtttttctttgtgtatctctcatagctcggaagactaagaagcagttcttagtcaaataagaacagtgagcagtgacatttttgttggtagaggttactttgtctgacttgtgagcagtggcactaaagttcataatagactatatattccttaccaatacctgtaattttcgtgcaaatgtatttcagtattaatattatttgatacaatacaatcaaataagcataacccaataggaaatgcataccatagaaaatggaataaaatgcggaatgagttaatagtacattttttgcgatcagtcgaacattatagtgcttaacttatatccttattttttttaaaaaaaaaacaaacttgcttatgcatgtgcatgggttgatggctagttcttacataatttgagtttttgtaagctcatgtatgttaaagaaaaatagacccatttatgcatactactaattgaatttgttgacttaaattgcctacaggttatccttagtgagatagatgagcctgagattgaggcactaaaggatgtcggaatggagataataggaaaatgcgatggtttaccactcgctatcaaagtgctagggggcctcttgtgcagaagagatagaaaccatggtgtttggtcagagattttgagtaattctacatggtcagttgatggaatgccccaagacctaaactatgtgttgcacctgagctatgaagatctctctcctcatttgaagcaatgcttcctgcactactcacttatccctaaaaatgttgtccttggttatgataccattattggtatgtggatcagtgaaggacttgtacttcaatgcacaaaaggattagaagaattaggagaagattactacaaggagttgatcatgagaaatcttttggagccaagtatagagtatgttgatcaatggcactgcacgatgcatgatgttgtccgctcatttgctcattatgtggctagagatgaagcattggtggttcaaggtagacaaattgatattagtaatcttcattcacagaagttctatcgattatccattcaaactgatgatgaagtagagtggaatcttctaaaagagcaaatgtcactcagaatgttaatatcagtaagtgatatcaagctaaggcctggtgattcattgggcaacttttcaggtctacggatcttgtgtataaattcatcaaattttcttcctttggttgactctctgtgccaattgaagcacctaaggtacttgtccttggcaacagatgatatatctagattgccagatgacattggcaagatgaaattcttgatgtacattgacattaatgcatgtggaaatttggtgcaacttcctaagagcattttaaagctaagacagctgaggtatctaagccttggtgacacacatataaatgcaatacctgaggggttccataatctgtcaagtattcggaaattatatggttttccagctcacatgggcactggtggtgtttcgccaaaagagaattggtgtagtttggaagagctagaatgtctttctgagctcagggatctagacctaaattgtcttgagaatgtctctgccagctcttatgctgcaaaggcttcactttgcaccaaggagcatcttatcttcttaaaattacgctgcactagtagattgggagatgatgggttactcaaagaggaaggtttatctgagatggagcagcggcttgttgaggaggtgtttaatgagttctgtcctcctcgctgtttatacaatcttgaaatttttggatactttgggtgttcactgccaaattggatgatgtcaccaatatccagaacgcctcttacgagcttgaggtatctgtttcttaaagacttggcttgttgcacccaactacctgatattttgtctcagctccttcatttgttcatgctacaaattgttcgtgcaccggccatcaagcgtgtcgggtctgaattcctgctctgccatgatcatggccatcattccctgacggcgaaagcatttccaagattgcaagtgctattcttcgtggggatggtggaatgggaggagtgggagtgggaggaacaagtgcaagcaatggctgtcttggaggagcttttacttgagcgttgcaaactgaggtgccttcctcctggccttgccttccatgcaagggctctgaagaaactatggatatgtgaggtccagaacctcaagtctcttgataacttcgcttgtgttgttgagctcagtgtggatgacaaccctgatctgcagaggatatctaattttcccaaattgcggaagcttgacattatgttctgccccaaaatggaagtattggagaatgtgccagaactcagaatcctcacacttaaggactatagtattgaaacactccctggttatttgcagcaagtaagcatgaggaatttgttcgtggactgcagctttgagcttcttagttccatagccatgggagatacaggtcctgagtggaacaagatcagccatatccagcaagtgaaggctaattcagatgatggatacgatgaaacgatgtggtatgtctcctacacaagagatccctacagcttcgagacaaacatcatcccttcgtccaatcccagtggtatattttttttcttgggcttctgctcctttagtttctttcacatattttcctcatgttgattccatctttcatgtgcatatcatagtgcaaactaatgtccttctgtttgtttagctttgctgcatcagaaccaaatgatgagaagtag</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0479100, RefSeq:Os11g0479100