BGIOSGA003430

From RiceWiki
Revision as of 10:51, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003430| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA003430, complete gene.| tag = P0487E1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA003430

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003430, complete gene.

LocusTag

P0487E11.31

Ensembl Transcript ID

BGIOSGA003430-TA

Ensembl Protein ID

BGIOSGA003430-PA

Length

3082

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:14556793..14559874

Sequence Coding Region

14556793..14556798,14556865..14557500,14557889..14558268,14558369..14558455,14558582..14558912
,14558993..14559403,14559486..14559545,14559674..14559874

Genome Context

<gbrowseImage1> name=IndicaChromosome01:14556793..14559874 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:14556793..14559874 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGTTCGTGTCTGAATTTTTTTTTACAATTAACCGTGTGACAAATGATTCATGTTTGCATTCAGGAGCAAACTCGTTCTTGTTCACGCAATACAAGTACCTGGCCGCCTTCACGGCGGTCTTCGCCGTGGTCATCTTCCTCTTCCTGGGGTCCGTACACCGGTTCAGCACCGAAAGCCAGCCCTGCCAGTACACCAGAGGCAAGGCCTGCAAGCCGGCGCTGGCCAACGCCGTGTTCAGCACCATAGCCTTCCTCCTCGGCGCCGCCACCTCCGTCGCGTCGGGCTTCCTCGGCATGCGGATCGCCACGGCCGCGAACGCGAGGACCACGGTAGAGGCGAGGAGGGGCATCGGCCCGGCGTTCGCCGCCGCGTTCCGGTCCGGCGCCGTCATGGGGTTCCTCCTGGCGTCCCTGGGCCTCCTGGTGCTCTACGTCGCCATCAAGGTGTTTGGTCTCTACTATGGCGATGACTGGGAAGGGCTGTACGAGTCGATCACCGGCTATGGGCTCGGTGGATCGTCCATGGCGCTGTTTGGGAGGGTTGGTGGTGGGATTTACACCAAGGCCGCGGATGTCGGCGCCGATCTTGTCGGCAAGGTTGAGAGGAACATCCCTGAGGATGACCCGAGAAACCCCGCGGTGATCGCTGACAATGTGGGTGACAACGTCGGCGACATTGCCGGGATGGGCTCCGACCTGTTCGGCTCCTACGCCGAGTCCACCTGCGCGGCGCTGTTCGTCGCGTCCATCTCGTCGTTCGGCGCTGACCACAACTTCGCGGCGGTGTCGTACCCTCTGCTGATAAGCTCGGCCGGCCTCATTGTCTGCCTGATCACCACGCTCTTCGCCACTGACCTCTACAGGGTCAAGACCGTCGACGGCGTCGCGCCGGCGCTGAAGCTGCAGCTGCTCATCTCCACCGTGCTGATGACCGTCGGCGTCCTCGTCGTCACCTTCACAGCCCTCCCCCACGAGTTCACCATGTTCGACTTTGGAGAGGTGAAGCGAGTCAAGAACTGGCATCTGTTCTTCTGCGTCACAATCGGGCTTTGGGCAGGTCTCGCGATCGGGTTCACCACCGAGTACTTCACCAGCAATGCTTACAGTCCGGTGAGGGACGTCGCCGACTCCTGCAGGACCGGAGCGGCGACGAACGTCATCTTCGGGCTCGCCCTCGGGTACAAGTCCGTCATCGTGCCAGTGTTCGCCATCGCCGTGTCCATCTACGTCAGCTTCACGCTTGCCTCCATCTACGGCATTTCTGTCGCTGCGCTGGGAATGCTCAGCACGGTCGCCACCGGGCTCGCCATCGATGCCTACGGGCCGATCAGCGACAACGCCGGTGGGATCGCGGAGATGGCCGGCATGAGCCACCGGATCCGGCAAAGAACCGACGCCCTCGACGCCGCCGGTAACACCACCGCCGCAATCGGCAAGGGATTCGCCATCGGATCGGCGGCGCTGGTGTCGCTGGCGCTGTTCGGCGCGTTCGTGAGCCGGGCGGGGATGGCGGTGATCAACGTGCTGAGCCCCAAGGTGTTCGTGGGGCTCGTCGTGGGGGCGATGCTGCCCTACTGGTTCTCGGCGATGACGATGAAGAGCGTCGGCAGCGCGGCGCTGAAGATGGTGGAGGAGGTGCGGCGGCAGTTCGCCGCCATCCCGGGGCTGATGGAGGGGCGCGCCACGCCGGACTACGCCAGCTGCGTCAGGATCTCCACCGACGCGTCGCTCAGGGAGATGATGCCCCCCGGGGCGCTGGTGCTGCTCGCGCCGCTGGTCGCCGGCACCTTCTTCGGCGTCCAGACGCTCGCCGGCCTCCTCGCCGGCGCGCTCGTTTCCGGCGTGCAGGTTGCCATATCTGCTTCCAACAGTGGGGGAGCCTGGGACAATGCCAAGAAATATATCGAGGCAGGTGCATCCGACCATGCAAAGGCACTTGGTCCCAAGGGTTCGGACGCTCACAAGGCGGCGGTGATCGGCGATACCATTGGCGACCCGCTCAAGGACACATCCGGGCCGTCGCTCAACATCTTGATCAAGCTCATGGCCGTCGAATCTCTCGTCTTCGCGCCATTCTTTGCCGCCCATGGAGGATTGATATTCAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MEFVSEFFFTINRVTNDSCLHSGANSFLFTQYKYLAAFTAVFAVVIFLFLGSVHRFSTESQPCQYTRGKACKPALANAVFSTIAFLLGAATSVASGFLGMRIATAANARTTVEARRGIGPAFAAAFRSGAVMGFLLASLGLLVLYVAIKVFGLYYGDDWEGLYESITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESTCAALFVASISSFGADHNFAAVSYPLLISSAGLIVCLITTLFATDLYRVKTVDGVAPALKLQLLISTVLMTVGVLVVTFTALPHEFTMFDFGEVKRVKNWHLFFCVTIGLWAGLAIGFTTEYFTSNAYSPVRDVADSCRTGAATNVIFGLALGYKSVIVPVFAIAVSIYVSFTLASIYGISVAALGMLSTVATGLAIDAYGPISDNAGGIAEMAGMSHRIRQRTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGMAVINVLSPKVFVGLVVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFAAIPGLMEGRATPDYASCVRISTDASLREMMPPGALVLLAPLVAGTFFGVQTLAGLLAGALVSGVQVAISASNSGGAWDNAKKYIEAGASDHAKALGPKGSDAHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFAAHGGLIFK</aaseq>

Gene Sequence

<dnaseqindica>1..6#73..708#1097..1476#1577..1663#1790..2120#2201..2611#2694..2753#2882..3082#ATGGAGGTAGTAAATATCTACCAGTGTCTAACAAATTTATTAATTTGCTAGGATTAATCCTACAACTATCAGTTCGTGTCTGAATTTTTTTTTACAATTAACCGTGTGACAAATGATTCATGTTTGCATTCAGGAGCAAACTCGTTCTTGTTCACGCAATACAAGTACCTGGCCGCCTTCACGGCGGTCTTCGCCGTGGTCATCTTCCTCTTCCTGGGGTCCGTACACCGGTTCAGCACCGAAAGCCAGCCCTGCCAGTACACCAGAGGCAAGGCCTGCAAGCCGGCGCTGGCCAACGCCGTGTTCAGCACCATAGCCTTCCTCCTCGGCGCCGCCACCTCCGTCGCGTCGGGCTTCCTCGGCATGCGGATCGCCACGGCCGCGAACGCGAGGACCACGGTAGAGGCGAGGAGGGGCATCGGCCCGGCGTTCGCCGCCGCGTTCCGGTCCGGCGCCGTCATGGGGTTCCTCCTGGCGTCCCTGGGCCTCCTGGTGCTCTACGTCGCCATCAAGGTGTTTGGTCTCTACTATGGCGATGACTGGGAAGGGCTGTACGAGTCGATCACCGGCTATGGGCTCGGTGGATCGTCCATGGCGCTGTTTGGGAGGGTTGGTGGTGGGATTTACACCAAGGCCGCGGATGTCGGCGCCGATCTTGTCGGCAAGGTTGAGAGGAACATCCCTGAGGATGACCCGAGAAACCCCGCGGTAAGAAGTATTTTCCTACATCGAGTTGCATGTACCATTCAATTTATCTGAAAGTTTTTTAATTGCCCGACAAAAATGATTTTAAATCGGTGACGGGGCATGGTTGTGACCCTTTATAGGTCATCCGTGACGTGTTAGAACTACGACCCGACAAAAATGACTTATATCGGTGACGGATCATCCCCGATAGTCATATATTAAACGGGATACTTTTTGAACCGAAACGGGTCGCATTAGCTCGACACAAATGACTTGTTAAGGATGGCCGGATCTGTACTAGTGACTACATAAGAAAAATATTAATGACGGAAAATGTGGTTATTAAAGTTGGAAGCAATATTGTTGCCGTAAATTATTGTGAAGGTTTGCTCATTTTGTGTTGGTGCAGGTGATCGCTGACAATGTGGGTGACAACGTCGGCGACATTGCCGGGATGGGCTCCGACCTGTTCGGCTCCTACGCCGAGTCCACCTGCGCGGCGCTGTTCGTCGCGTCCATCTCGTCGTTCGGCGCTGACCACAACTTCGCGGCGGTGTCGTACCCTCTGCTGATAAGCTCGGCCGGCCTCATTGTCTGCCTGATCACCACGCTCTTCGCCACTGACCTCTACAGGGTCAAGACCGTCGACGGCGTCGCGCCGGCGCTGAAGCTGCAGCTGCTCATCTCCACCGTGCTGATGACCGTCGGCGTCCTCGTCGTCACCTTCACAGCCCTCCCCCACGAGTTCACCATGTTCGACTTTGGAGAGGTGAAGCGAGTCAAGAACTGGTATGAACAAAAACAGTGTATCGCCCCTTGCTCCATGTACATTTTGGCACGGATATATGGAAAGTTCAGCATTGGTAAATGGCAATGATGATAATGGCAGGCATCTGTTCTTCTGCGTCACAATCGGGCTTTGGGCAGGTCTCGCGATCGGGTTCACCACCGAGTACTTCACCAGCAATGCTTACAGGTAATTTCACTTGCACACAGTGTGCCGGAATTGCTACAGTAAAATTCTAGTACAGAAAATTTTGTAAGAATGAAAGATATACAAAGGTTTTCAGAGTGCTTGACTTTGCCCAAAAACCTCGTGCAGTCCGGTGAGGGACGTCGCCGACTCCTGCAGGACCGGAGCGGCGACGAACGTCATCTTCGGGCTCGCCCTCGGGTACAAGTCCGTCATCGTGCCAGTGTTCGCCATCGCCGTGTCCATCTACGTCAGCTTCACGCTTGCCTCCATCTACGGCATTTCTGTCGCTGCGCTGGGAATGCTCAGCACGGTCGCCACCGGGCTCGCCATCGATGCCTACGGGCCGATCAGCGACAACGCCGGTGGGATCGCGGAGATGGCCGGCATGAGCCACCGGATCCGGCAAAGAACCGACGCCCTCGACGCCGCCGGTAACACCACCGCCGCAATCGGCAAGGTAGACGACACTGAGGAATTTGATCGGCTACGTGGAATAACTCGTGATCAAGATGAACATGGTTTAATATGTGCTTGCAGGGATTCGCCATCGGATCGGCGGCGCTGGTGTCGCTGGCGCTGTTCGGCGCGTTCGTGAGCCGGGCGGGGATGGCGGTGATCAACGTGCTGAGCCCCAAGGTGTTCGTGGGGCTCGTCGTGGGGGCGATGCTGCCCTACTGGTTCTCGGCGATGACGATGAAGAGCGTCGGCAGCGCGGCGCTGAAGATGGTGGAGGAGGTGCGGCGGCAGTTCGCCGCCATCCCGGGGCTGATGGAGGGGCGCGCCACGCCGGACTACGCCAGCTGCGTCAGGATCTCCACCGACGCGTCGCTCAGGGAGATGATGCCCCCCGGGGCGCTGGTGCTGCTCGCGCCGCTGGTCGCCGGCACCTTCTTCGGCGTCCAGACGCTCGCCGGCCTCCTCGCCGGCGCGCTCGTTTCCGGCGTGCAGGTAGTGTAGTAGGGAGTAGCAGCGTGTACGTTCTGCATGATGACACTGAGCTGAATTGTTAACGTTTTTGGTTTCTTCGTAGGTTGCCATATCTGCTTCCAACAGTGGGGGAGCCTGGGACAATGCCAAGAAATATATCGAGGTAATCTGATGACTTGACTCTACTTTTAAATTCAGACATTTTTCCATTTCAATTGAAATATGAAACATTTCGAGATATTTCCATCTGAAACTGTGCACTTCTTTTGTTCTCCCCAATTGGAAACGCAGGCAGGTGCATCCGACCATGCAAAGGCACTTGGTCCCAAGGGTTCGGACGCTCACAAGGCGGCGGTGATCGGCGATACCATTGGCGACCCGCTCAAGGACACATCCGGGCCGTCGCTCAACATCTTGATCAAGCTCATGGCCGTCGAATCTCTCGTCTTCGCGCCATTCTTTGCCGCCCATGGAGGATTGATATTCAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003430