Os11g0482000

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Revision as of 09:10, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0482000| Description = Similar to 40S ribosomal protein S5-1| Version = NM_001074432.1 GI:115485512 GeneID:4350516| Length = 2075 bp| Defi...")
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Gene Name

Os11g0482000

Description

Similar to 40S ribosomal protein S5-1

Version

NM_001074432.1 GI:115485512 GeneID:4350516

Length

2075 bp

Definition

Oryza sativa Japonica Group Os11g0482000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:18744145..18746219

Sequence Coding Region

18744452..18744506,18744592..18744795,18745688..18745959,18746046..18746114

Expression

GEO Profiles:Os11g0482000

Genome Context

<gbrowseImage1> name=NC_008404:18744145..18746219 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:18744145..18746219 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgaagtggagctcccgcagcaggaggtcaagctcttcagccgctggtccttcgaggacgtccaggtgaacgacatctcgctggcggactacctggcggtgaacccgacgaagcacgcgacgtacctgccgcacacggcggggaggtactcggcgaagaggttccggaaggcgcagtgccccatcgtggagcgcctgaccaactcgctcatgatgcacggccgcaacaacgggaagaagatcatggccgtgcgcatcgtcaagcacgccatggagatcatccacctcctcaccgacgccaaccccattcaggtcatcgtcgacgccatcatcaacagtggccctcgtgaggatgcgacccgtattgggtctgcgggtgctgtgaggaggcaggctgtggatatctctcccttgaggagggtcaaccaggcaatctacctcctcaccactggtgccagggagagcgccttcaggaacatcaagaccattgctgagtgccttgctgacgagcttattaatgccgccaagggctcatccaacagctatgccatcaagaagaaggatgagatcgagcgtgttgccaaggccaaccgttga</cdnaseq>

Protein Sequence

<aaseq>MAEVELPQQEVKLFSRWSFEDVQVNDISLADYLAVNPTKHATYL PHTAGRYSAKRFRKAQCPIVERLTNSLMMHGRNNGKKIMAVRIVKHAMEIIHLLTDAN PIQVIVDAIINSGPREDATRIGSAGAVRRQAVDISPLRRVNQAIYLLTTGARESAFRN IKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR</aaseq>

Gene Sequence

<dnaseqindica>1714..1768#1425..1628#261..532#106..174#ctagctcccccactctcgtttagggtttccctccgccgccgccgcctcccgcatccacgcgcctcctcctcctccgccgccgccgccgccaccgcagcatcagccatggccgaagtggagctcccgcagcaggaggtcaagctcttcagccgctggtccttcgaggacgtccaggtgcgttggttcccctctcctccgtgctcctccctcctcttgggcccggtcgctaaccgcgttctccggcggcggcggcggtgcaggtgaacgacatctcgctggcggactacctggcggtgaacccgacgaagcacgcgacgtacctgccgcacacggcggggaggtactcggcgaagaggttccggaaggcgcagtgccccatcgtggagcgcctgaccaactcgctcatgatgcacggccgcaacaacgggaagaagatcatggccgtgcgcatcgtcaagcacgccatggagatcatccacctcctcaccgacgccaaccccattcaggtcatcgtcgacgccatcatcaacaggtaaccccccctttcgcgcttcgctcgcccaatctctttcgaaccagtaaaattttaccgggatttgttagaacaccacacgagaatttatctgagaatactagatttggggggggggaacaaaggatcacaacctgtgtgccatcctgttacatttttgtgcccttagctttccacaattcgtcccttccatgccactccatgtagtaacgtagagctgtgctgcgccgctgtatgttgttggccaatggtgctcttggatcgtgctctcgccgcgtgttatgcgctgcgccgctgtgtgtgccgtgggcgcggtatagagctgttggagcatgcggcgaatgtgtatcgctgtgagtagtagggcacagggtgggctggtgttctgctttggcatcctggttgaagcagtgcatggcgcggcgcagcgcggtgttggtatgcatgttacttgaatcagatgcgatgagtcgtgtagatctgtttctctcatcatgcggtgttgggagcagttgatcagtggatgtgaggaggcatgggactaaattgatcagggaatgcgaggaggcttgacgttgtggatgtggataaacccagtaatggggtgaggatgttgtagaggcaaaaataacagaattgtattatattgaagaaatcttttgtactagtagcattcaaatctaaaaaaatgtaggttgcatttttaaagcgcaattgttattatggtgtatttcaaattttgctcatggttttcaagcattagtgtttatctcctccctgttggtatatatataaatacattattctgttgctgtggtatctaaaatacatgattagttttggtatttagtgattatgaatgttggatatgaattatctgtgttgtttgcagtggccctcgtgaggatgcgacccgtattgggtctgcgggtgctgtgaggaggcaggctgtggatatctctcccttgaggagggtcaaccaggcaatctacctcctcaccactggtgccagggagagcgccttcaggaacatcaagaccattgctgagtgccttgctgacgagcttattaatgccgccaagggctcatccaacaggtacaacacattgtcatggtacatcttgctttttgttcggatgataccaggttattgacacatctgtgatctaattgtgtttcagctatgccatcaagaagaaggatgagatcgagcgtgttgccaaggccaaccgttgagtggtgatcccatgtcattgtgctaaagctcttgcgctgtttggcaggactatactttttgctagtaatttaagccttttcagacctacctgtggtttaatgtttgaatgaacatcactagtgctgagaaaaatatgtagtgctctattctatctatctatcgacatggttttatattgaacccgcaattcccgttccttcataatctgagttccttgatgcgtgctgaatggctctgctctggttatatgttgtttacttgtttgaattgatgaactgaagatgataattgatagattttgagtgc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0482000, RefSeq:Os11g0482000