BGIOSGA003502

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Revision as of 10:52, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003502| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA003502, complete gene.| tag = OsI_018...")
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Gene Name

BGIOSGA003502

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003502, complete gene.

LocusTag

OsI_01877

Ensembl Transcript ID

BGIOSGA003502-TA

Ensembl Protein ID

BGIOSGA003502-PA

Length

4643

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:16053278..16057920

Sequence Coding Region

16053278..16053650,16053776..16055545,16055818..16056072,16056468..16056508,16057649..16057767
,16057866..16057920

Genome Context

<gbrowseImage1> name=IndicaChromosome01:16053278..16057920 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:16053278..16057920 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGATGCTATCAATTCTTGTGAGGACTTTTGCTGGAAACACTAGTTCAAAGTTCAATAAAGTTGCACTGCTGAAGCTGAGTAGGTGGCTATCAGGATCCACTCCCAACACAAATTCATTATCTAGCAAGAAACATAATTTTGACAAGTCTGCTCTGTTATTCCAAGGCTGTGCAGATGTTAGGTTTCTAAAGAAGATCCACGCTAATGTTTTCACACATGGACTTTGCTGGGATGTGATTCTTGGCTCTAAGATTCTGAGTTGTTATGCTAATTTAGGTGCATTGCATGAGTCAAGGCTTGTTTTTCAGAAAATTGTAAATGATGATATTTCCCTGTGGAATTCAGCCATGGTTGATTATTTTAGAGCAGGAGTGCATGCAGATTCACTTAAGCTTGCTCTGTCTGGGAATAAATTCGTCGGCTCCTCCCTCATTGGCTTATACTCCAAGTTTAGCAAGACGAATGATTCACGTGGAGTGTTTGAAGAGATCATCAACAAGGACATTGTTGCTTACACTTCGATGATCACTGGTTATTCAGAAACTGTGGATTCAATTGCATGGAACGCATTTGAAATTGCCACTGATATGCTGCAGAACAACTTGGAAATAAACCGTGTGACTCTGGTAAGCTTACTGCAAATAGCTGGGAATCTGGGAGCACTTCAGGAGGGTAAATCTCTCCATTGCTACTCCATAAGGAGAGCAATTGGTGTCTCAGATGATATTCTAGAGACCAGCATTGTGAACTTTTATACTCGATGTGGAGCTTATCAGTCAGCGGCTACTGTTCTGCAAAATTCAAAGGGAACTGTTGCTTCATGGAATGCTCTGCTTTCTGGTCTTAATAGAGCTGGACAGAGTTTCAATGCAATCCAGTATTTGCCTGTGATGCTGCATGAGCATAAAGTAACTCCAGATTCTGTCACTTTTGCAAACGTGCTTTCAGCCTGTGCTGAGCTATGCTATTTTTGCTTTGCTGCTAGTATTCATGCCTACTTCATAAGAAGATTTATACCTATGGATGTTGTTTTGACCACTGCACTTATTGAGGTGTACACCAAATGCACAAGAGTCATGAGATCGAAGTATCTCTTTGATCAACTTATTATTAAAGATGTTGTATCCTATAACGCGATGATTTATGGTTACCTACAAAATGACATGGCCAATGAGGCCACCTCATTACTCAATTACATGATGGCAGAAGGTGTTGCTCCAGATTTTGCAACTGTTCTTAGCCTGCTTGCTGCTTTTGCTGACCAAAGAGATTTAGTTAGAGGGAGATGGATCCATGGTTTTGCAATTAGGCATGGGTTTTGTTCAGATGTGGACGTTGAAAATCAAATTCTATATATGTATTCAGCCTGCGGAAAAATTGCAGCAGCAAGGGCTATATTTGACTCATTGGAAAAGAAAAACTTGGTTTCATGGACAGCCATGATGAAAGGTTGCTTATCCAATGGACATGCAGATGAGGTGGTTCAATTATTTCAAGTGATGCAAAAATATGGGGAGAAACCTGATTCTGTTTCTCTTGTAACTGCAGTTCAGGCTGTTTCTGATCTTGGACATCTAAATGGTCTAAAACAAATTCATTGTTTTGTTTACCGTTCCTTGTTGGAGAAAGATAAGATTACTGCTAATTCATTGATAAGTGCATATGCCAAGTGTGGAAAGCTGGATTTGTCAGCAGGTTTGTTCTTTAGTTTGAAATATAGAAACTTGGATACTTGGAATGCAATGATCAGTGCTTATGCAATGCATGGATTCCATATTAACGTGCTTGAAATGTTCAAGCAAATGGAAGAAGAAAACATTCAGCCTGATGAGTTAACATTCTCCACTGTGCTTACTGCTTGCAGCCATGCTGGTCTTGTCAAGGATGGTTGGCGTATTTTCAATTCCATGACCTCAGTATATTCAGTTCTTCCACAGGAAGAGCATTACGGTTGCATGGTTGACTTGTTGGGTCGTGCTGGGCATCTAGAAGATGGATACAAATTTATAAAGCTATCTACCTTAAAAGATAAATCCACTATATTTTGTGCTCTGCTCTCTGCTTGCAGAACTCATGGAAATACACGACTTGCACATGCTATTAGCAAAGAGCTCCTTGAGCATGGACCTCAGAATCCAGTGCCAGGTCAAACCAGTTGGCAGAATGACACGGCCTGGAGACTTACATTACATTGTAGAGGGGTCAGCTCCAAGCTCGTAGGCGCTGATCCTGGGGCAACACAATCATGGATTGAGGCTGTAGTGGTCTATCCCACTCTCTGCCTGCCCTCCTCCCTCATGCAAAGAACAGAGGTGCATGACCCTCAAATCCCTCTCAAATTAGCCCCAAATCAAAGGGTTTTCTGTGGACTTCACATGGAGATCGTGTTGGAAGCTCTCCGCTCATCTACCTTCCAATCAGTAATAGCGGGCCTGATGGCTGCTAGATCGGCTATATCTATTGTTGCTCTTACACTAAATTATAAAATGGCAAGGAAAAACCGGATGCAAAACCACGGAAAGGGTGGCATAAACCGCCTAAAGGAATTCTCAAGGCACTTGCCTCATGTTGCTGATGCAACGATGGCAGAAGCCTACGCCCTCAAGTAA</cdnaseq>

Protein Sequence

<aaseq>MTMLSILVRTFAGNTSSKFNKVALLKLSRWLSGSTPNTNSLSSKKHNFDKSALLFQGCADVRFLKKIHANVFTHGLCWDVILGSKILSCYANLGALHESRLVFQKIVNDDISLWNSAMVDYFRAGVHADSLKLALSGNKFVGSSLIGLYSKFSKTNDSRGVFEEIINKDIVAYTSMITGYSETVDSIAWNAFEIATDMLQNNLEINRVTLVSLLQIAGNLGALQEGKSLHCYSIRRAIGVSDDILETSIVNFYTRCGAYQSAATVLQNSKGTVASWNALLSGLNRAGQSFNAIQYLPVMLHEHKVTPDSVTFANVLSACAELCYFCFAASIHAYFIRRFIPMDVVLTTALIEVYTKCTRVMRSKYLFDQLIIKDVVSYNAMIYGYLQNDMANEATSLLNYMMAEGVAPDFATVLSLLAAFADQRDLVRGRWIHGFAIRHGFCSDVDVENQILYMYSACGKIAAARAIFDSLEKKNLVSWTAMMKGCLSNGHADEVVQLFQVMQKYGEKPDSVSLVTAVQAVSDLGHLNGLKQIHCFVYRSLLEKDKITANSLISAYAKCGKLDLSAGLFFSLKYRNLDTWNAMISAYAMHGFHINVLEMFKQMEEENIQPDELTFSTVLTACSHAGLVKDGWRIFNSMTSVYSVLPQEEHYGCMVDLLGRAGHLEDGYKFIKLSTLKDKSTIFCALLSACRTHGNTRLAHAISKELLEHGPQNPVPGQTSWQNDTAWRLTLHCRGVSSKLVGADPGATQSWIEAVVVYPTLCLPSSLMQRTEVHDPQIPLKLAPNQRVFCGLHMEIVLEALRSSTFQSVIAGLMAARSAISIVALTLNYKMARKNRMQNHGKGGINRLKEFSRHLPHVADATMAEAYALK</aaseq>

Gene Sequence

<dnaseqindica>1..373#499..2268#2541..2795#3191..3231#4372..4490#4589..4643#ATGACGATGCTATCAATTCTTGTGAGGACTTTTGCTGGAAACACTAGTTCAAAGTTCAATAAAGTTGCACTGCTGAAGCTGAGTAGGTGGCTATCAGGATCCACTCCCAACACAAATTCATTATCTAGCAAGAAACATAATTTTGACAAGTCTGCTCTGTTATTCCAAGGCTGTGCAGATGTTAGGTTTCTAAAGAAGATCCACGCTAATGTTTTCACACATGGACTTTGCTGGGATGTGATTCTTGGCTCTAAGATTCTGAGTTGTTATGCTAATTTAGGTGCATTGCATGAGTCAAGGCTTGTTTTTCAGAAAATTGTAAATGATGATATTTCCCTGTGGAATTCAGCCATGGTTGATTATTTTAGAGCAGGTTATCCGGAGGAGGTTATAATTTTGTATAAGAGATTGAAATTGAACCAGATTGGTTTCAATGGGAAAACTATACTTTTGTTATGAAAAGCTGCACTGAGCTTAAGAATCTGTACTTGGGTAAAGGAGTGCATGCAGATTCACTTAAGCTTGCTCTGTCTGGGAATAAATTCGTCGGCTCCTCCCTCATTGGCTTATACTCCAAGTTTAGCAAGACGAATGATTCACGTGGAGTGTTTGAAGAGATCATCAACAAGGACATTGTTGCTTACACTTCGATGATCACTGGTTATTCAGAAACTGTGGATTCAATTGCATGGAACGCATTTGAAATTGCCACTGATATGCTGCAGAACAACTTGGAAATAAACCGTGTGACTCTGGTAAGCTTACTGCAAATAGCTGGGAATCTGGGAGCACTTCAGGAGGGTAAATCTCTCCATTGCTACTCCATAAGGAGAGCAATTGGTGTCTCAGATGATATTCTAGAGACCAGCATTGTGAACTTTTATACTCGATGTGGAGCTTATCAGTCAGCGGCTACTGTTCTGCAAAATTCAAAGGGAACTGTTGCTTCATGGAATGCTCTGCTTTCTGGTCTTAATAGAGCTGGACAGAGTTTCAATGCAATCCAGTATTTGCCTGTGATGCTGCATGAGCATAAAGTAACTCCAGATTCTGTCACTTTTGCAAACGTGCTTTCAGCCTGTGCTGAGCTATGCTATTTTTGCTTTGCTGCTAGTATTCATGCCTACTTCATAAGAAGATTTATACCTATGGATGTTGTTTTGACCACTGCACTTATTGAGGTGTACACCAAATGCACAAGAGTCATGAGATCGAAGTATCTCTTTGATCAACTTATTATTAAAGATGTTGTATCCTATAACGCGATGATTTATGGTTACCTACAAAATGACATGGCCAATGAGGCCACCTCATTACTCAATTACATGATGGCAGAAGGTGTTGCTCCAGATTTTGCAACTGTTCTTAGCCTGCTTGCTGCTTTTGCTGACCAAAGAGATTTAGTTAGAGGGAGATGGATCCATGGTTTTGCAATTAGGCATGGGTTTTGTTCAGATGTGGACGTTGAAAATCAAATTCTATATATGTATTCAGCCTGCGGAAAAATTGCAGCAGCAAGGGCTATATTTGACTCATTGGAAAAGAAAAACTTGGTTTCATGGACAGCCATGATGAAAGGTTGCTTATCCAATGGACATGCAGATGAGGTGGTTCAATTATTTCAAGTGATGCAAAAATATGGGGAGAAACCTGATTCTGTTTCTCTTGTAACTGCAGTTCAGGCTGTTTCTGATCTTGGACATCTAAATGGTCTAAAACAAATTCATTGTTTTGTTTACCGTTCCTTGTTGGAGAAAGATAAGATTACTGCTAATTCATTGATAAGTGCATATGCCAAGTGTGGAAAGCTGGATTTGTCAGCAGGTTTGTTCTTTAGTTTGAAATATAGAAACTTGGATACTTGGAATGCAATGATCAGTGCTTATGCAATGCATGGATTCCATATTAACGTGCTTGAAATGTTCAAGCAAATGGAAGAAGAAAACATTCAGCCTGATGAGTTAACATTCTCCACTGTGCTTACTGCTTGCAGCCATGCTGGTCTTGTCAAGGATGGTTGGCGTATTTTCAATTCCATGACCTCAGTATATTCAGTTCTTCCACAGGAAGAGCATTACGGTTGCATGGTTGACTTGTTGGGTCGTGCTGGGCATCTAGAAGATGGATACAAATTTATAAAGCTATCTACCTTAAAAGATAAATCCACTATATTTTGTGCTCTGCTCTCTGCTTGCAGAACTCATGGAAATACACGACTTGCACATGCTATTAGCAAAGAGCTCCTTGAGCATGGACCTCAGAATCCAGGTATTTATGCTCTGATTTCAGAAGTATATGCTCAGGAAGGGCAGTGGAACGAAGTTGCTAATACAAAGGCCAGAGCTGATTTAAGTGGGTTAAAGAAACATCCTGGTTCTAGTTTGATTGAATCAATGGAGCAAGGAATGTCCTGACGTCGGCATGTTGCACTTATGGTGTGGGAATTTTTCACTATGGCCTGTTTGAAATTCTTACTTTACAAATGGACCCATGCAAAAACTATCGCAGGAATGGACCTTGGGTTATTATCGATTATGCAGTGCCAGGTCAAACCAGTTGGCAGAATGACACGGCCTGGAGACTTACATTACATTGTAGAGGGGTCAGCTCCAAGCTCGTAGGCGCTGATCCTGGGGCAACACAATCATGGATTGAGGCTGTAGTGGTCTATCCCACTCTCTGCCTGCCCTCCTCCCTCATGCAAAGAACAGAGGTGCATGACCCTCAAATCCCTCTCAAATTAGCCCCAAATCAAAGGGTTTTCTGTGGACTTCACATGGAGATCGTGTTGGAAGGTATATTCTCCCTTGTTCCCCTCATTTTGTTATTTTGATGGTTGATTTGAGCAAATTAGGGTGAAACCCTGGTATTTATTTGGCTTTATTTATGCAAAAAAAGGTGGATGAGTATATTAGTTTTATTGGATGAATTAAACTCAGGTTATCAATATGTGATTGAGTATATCAGGAAGATTAGTTTCTATGAACTTTAATTTTAGTTGACTTCCGTTGCAATGACGGGAAGAAAAACCATTTCGCTCAACTGTAAAATCATGGTTCTTAAGTCATAAAGTCGAGTTGAGATACCCTCTACTGTCTTGGAGACTACCATATCTAGCTATTACTATACATAGCTATTACTTCTACTGCTAATATGTTACTATGTGTTGTGCCTGATGGAACTGATGCAGCTCTCCGCTCATCTACCTTCCAATCAGTAATAGCGGGCCTGGTAAGCCAAGCCTCCCAAGCGATTCACTGTTGCTGCCTTTGCTCCATTGCGTCTTCTGCTGCCAACAAGTCGATTCATGCGTCATACTCCCTGACTCCCTGACGACTAGTCACAAGACTTGATTACAGGTGTGTAAAATAAATAAATTGCATCATAACTATCAGAATCCTTGCATTGGATGGAAAAGAACAAGTATCAAGTAACCCAACAGTGCTTCATCCTATATAAGATGTGCATTCCCATCTCTTGTATTTTATTTCTCCCTGAGCGCACACTTGAAACATTAAGTTTTAACTTAGGGATGTCTGGCTGGAACTGAGAACTGATGCTTGCATCGAAGTGGCAAGATTGTTGAAGATTTGTGGGTGCCTTGTCAGTGGCAGTATCTTTTTAGCTGTTGGCCTGTTGCGATATTCAGTTACTCATTTCTTTCTTCTCAATAGATTTCTTGAACTCTGACAGATAGCTGTTTGATGTTTCTTCCTCAACGACTTCAGGATGTATGTTTGATTTTTTTAAAAAAAATTATTATTGCTCTTCAATTACTTTACTCTCAGGTTACTTAGCCGATATCAAATGAGCAATGGTTCAAGATGTGGAGAGAAGATTCCACATTGGTTGCCTCGCCATGGTCACTTCTCCACATGCAGCTAGGATCGCTTCAAAAAGAACTGTAGCCGGGAACACATTTGTCATATGTATCACTTACTCATTACTGTTCAGCGCAAAGTTAGTCTAGTTTATTCTGGTTTTGTTTAACATGCCTTATATAGAAAGAAAAAACCTAAAAAATGTTTCCTTCGATCTTGAAGATAATATTGAGGAGTTGGTGATACCAATGTCATCGCGTTGGAGATCAAGATCGAACTCTTGAAATTGGGGACTAGCTTACATGTTTGATACTGAGACGCTTGATGACGATGAGGTGGTCAGCAACCTCAACTGCCGTCCGGTATATTCTCACAATCTCACTCCCCCAACTTAAGCATCCAAGGAGAAGAATGGCCTCCTCTGAATCAACATGAAATTTTTACTTGCTTTTGCAGGATTCATGAAGTGACGCTAAAATGTTTTCACTTGTAAATCAACACAACTTATTGTTGGGAAAGGAGACAAACGGTGAATGGTGAAATGATTCAGATGGCTGCTAGATCGGCTATATCTATTGTTGCTCTTACACTAAATTATAAAATGGCAAGGAAAAACCGGATGCAAAACCACGGAAAGGGTGGCATAAACCGCCTAAAGGAATTCTCAAGGTAAATGTGGATGCTTCTTTTGACATTGTTTCGAGTATAGGACGAGCCGGAGCAGTCATATGAGATGCACAAGGAAATTTTATAGCTGGTTCTTGCAGGCACTTGCCTCATGTTGCTGATGCAACGATGGCAGAAGCCTACGCCCTCAAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003502