BGIOSGA003503

From RiceWiki
Revision as of 10:52, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003503| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA003503, complete gene.| tag = OsI_018...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA003503

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003503, complete gene.

LocusTag

OsI_01880

Ensembl Transcript ID

BGIOSGA003503-TA

Ensembl Protein ID

BGIOSGA003503-PA

Length

4186

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:16072868..16077053

Sequence Coding Region

16072868..16073438,16073606..16073733,16076415..16077053

Genome Context

<gbrowseImage1> name=IndicaChromosome01:16072868..16077053 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:16072868..16077053 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACCATCCTCCTGCTGGTTGCGTTCTTCTGTCGGATCAAGAAGCAGGCTGCCATGGCAGCCAAGAACAAGAGGAAGAAGCAACCCAAGCTGCCACCGGGGCCAGCTACCATGCCGGTGTTGGGTAACATGCACCAGATGCTGATGAACAAGCCGGTGTTTAGGTGGATCCACCGCCTTCTCGACGAGATGGACATCGAGATCCTCTGCCTCCGTCTCGGCCGCGTCCACGTGATCACCGTCGCCTCGCCGGAGATGGCCCGGGAGGTCCTGCGCAAGAACGACGCCTTGATGACCTCCCGGCCGGCGTCATTCGCGTGGCGGGCGTTCAGCTTCGGGTACAAGAACACCATTGGATCGACGGGCGATCAGTGGAAGAAGATGAGGCGGGCGCTCGCATCGGAGATCCTCTCGCCGGCCATGGAGTGCCACCTTGTCAATTACGTCTACAGCCACTGTAACAATGGCACTGTAGACGTCCGGCACGTCACAAGGCATTTCTGCGGTAACATCGCCAGGAAGCTTGTGTTTGGCCGGAGACACTTCTCGACGCCGACACCAGCCAACTCCGGGAGAGCTCTCAGGAGAAATGGTGATGAGAGGAGAGAAGTAGCCGATTTTCTGGACGTGTTGGTTTCCTTGGAGGACGCACAAGGGAATCCATTGTTGTCGTTAGACGAGGTGAAGGCTGAAACGCTGGAAATATTTATTGCAACGGTAGACAATCCATCGAATGCTGTAGAGTGGGCACTGGCCGAGATGGTAAACAATCCAAATGTTATGAAGAAGGCAGTGGACGAGCTTGATGTCGTTGTCGGTAAGGAAAGACTTGTCGAGGAATCCGACATTCAGAACCTCACATACCTCAAGGCATGTATCCGGGAGGCGTTCCGCATTCACCCCTACCACCCGTTCAATCCACCCCATGTTGCCATATCTGACACGATCATCGCCGGATACTTGATACCAAAGGATAGCCATGTAATGCTAAGCCGAATTGGGCTTGGCCGGAACCCTAGAGTATGGGTTAACCCACTTGAATTTCGACCAGAGCGACATCTGAACAATGCTACTAGTACTATGGTGCTAGCTGAGCCAGAGTTGCGGTTTGTATCATTCGGTGCTAGTAGGCGTGGCTGCCCTGCCGTGTCACTTGGCACTTCAATTACAATGATGCTATTTGCAAGGCTTCTACAAGGGTTCACTTGGAGCATACCCCCTGGTGCAGACAAGATAGAGCTTCAGGAGTCAGCTTCGAGCCTCCAATTGTCTAAACCACTGCTTATGCAAGCAAAACCACGATTACTGCTCCATCTATATGAGCTAGATAGGCTCTAA</cdnaseq>

Protein Sequence

<aaseq>MTILLLVAFFCRIKKQAAMAAKNKRKKQPKLPPGPATMPVLGNMHQMLMNKPVFRWIHRLLDEMDIEILCLRLGRVHVITVASPEMAREVLRKNDALMTSRPASFAWRAFSFGYKNTIGSTGDQWKKMRRALASEILSPAMECHLVNYVYSHCNNGTVDVRHVTRHFCGNIARKLVFGRRHFSTPTPANSGRALRRNGDERREVADFLDVLVSLEDAQGNPLLSLDEVKAETLEIFIATVDNPSNAVEWALAEMVNNPNVMKKAVDELDVVVGKERLVEESDIQNLTYLKACIREAFRIHPYHPFNPPHVAISDTIIAGYLIPKDSHVMLSRIGLGRNPRVWVNPLEFRPERHLNNATSTMVLAEPELRFVSFGASRRGCPAVSLGTSITMMLFARLLQGFTWSIPPGADKIELQESASSLQLSKPLLMQAKPRLLLHLYELDRL</aaseq>

Gene Sequence

<dnaseqindica>1..571#739..866#3548..4186#ATGACCATCCTCCTGCTGGTTGCGTTCTTCTGTCGGATCAAGAAGCAGGCTGCCATGGCAGCCAAGAACAAGAGGAAGAAGCAACCCAAGCTGCCACCGGGGCCAGCTACCATGCCGGTGTTGGGTAACATGCACCAGATGCTGATGAACAAGCCGGTGTTTAGGTGGATCCACCGCCTTCTCGACGAGATGGACATCGAGATCCTCTGCCTCCGTCTCGGCCGCGTCCACGTGATCACCGTCGCCTCGCCGGAGATGGCCCGGGAGGTCCTGCGCAAGAACGACGCCTTGATGACCTCCCGGCCGGCGTCATTCGCGTGGCGGGCGTTCAGCTTCGGGTACAAGAACACCATTGGATCGACGGGCGATCAGTGGAAGAAGATGAGGCGGGCGCTCGCATCGGAGATCCTCTCGCCGGCCATGGAGTGCCACCTTGTCAATTACGTCTACAGCCACTGTAACAATGGCACTGTAGACGTCCGGCACGTCACAAGGCATTTCTGCGGTAACATCGCCAGGAAGCTTGTGTTTGGCCGGAGACACTTCTCGACGCCGACACCAGCCAACTCCGGTGGCCCTGGCCACGACGAGGAGGACCACATCGACGCGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTATCATAATGGAGAGGATGCATGAAGGGAGAGCTCTCAGGAGAAATGGTGATGAGAGGAGAGAAGTAGCCGATTTTCTGGACGTGTTGGTTTCCTTGGAGGACGCACAAGGGAATCCATTGTTGTCGTTAGACGAGGTGAAGGCTGAAACGCTGGTAATAACCTCTATTACACTATCACTTAAATATATATTCCCTCCGTCCCAAAATATAAAAACTTCTAGCATTTAAAATTAGTCTCAAAATATATCAACTTCTCCACTAACAATCTCTTCCTAGTCAATTATAACTCTCCACCATTCATTTTGCTCACCTACCTCCACTTCTAAACAAATCATAATGTCTCCCCATTTAATTATACCTGCTTTCTTAATAACCATATTCAAATCTGAAACATCTTATATTCGGGCTGAATCTTATATTCGGGGACAGAAGTAGTATTATATTTCTAACTATATAGGACAATATGTGTGTGTGTTACCAAAAAGAAAAAAAAAATCTATGACCACATCTTGATATATTGTGAAAATTAAGAAAAACACAAACTAGGACTAGACAGAATGACAGATGGAATTGAAATGATTGCAATGTAGTACTATGTACTTTTAATTGACCTACTGTGCTGCTTTTTGTTTGGATATTATTCCCAATGTTTCAAAATTCCAGCACCTCTATGGTTTTTAGCGAATATTAAGGTTGAGTAAAAAATACTCCATCCATCCTAAAATATAACAACTTTTAGCACTCAGAATTCGTCCCAAAATATAACAACTTCTTCACCAACATTCTCTTCCCAACCAATCACAACCCTCCACCATTCACTTTTCCCATCTACCTCCACCACTCATCCAATCACAACCCTCCACCATTTATTTCTACCTACTTAATTGTGTCCAACTCTAAAACTTATTATATTATGGAACAGAGGGAGTATATAATATCGTTTATTAAATAAGAGATGGTTTGAGGGTATGATGGGAAAAAATATATAATATCTTTTATTAGCGTGACATATTAGTATTCTAGAAATGCTTACATTTATTTATAAACATTAAACTCTAGAAGTGCTACTATTTTGGATTGGAGGGCATATTAGTTACTTAGTGAGGTGTTGATTCGTTATAACTAAGGATACTATTACACTGTCACCAATTTATGTAGTACTACCCTTTTTATCACACGTTTGACTATCTGTCTTATTAAAAAATTACATAACTATAATGTAAGTTGTTTTATTACTTAAAGTACTTTAAGCATGATTTATATCTTATATATTAAATGGTTAAAATGTATTCAAAAGTTAACAGCGTCATTTATTAAAAAACAAATGGTGCGGGCTTACGGTTAGCTTTGTTCAAAGTGTAGTACTGCGCACGCTAAATGATTGGCGTATCGTGTTTCTTATTTGTTAGTATTATTGTGTATTGCTTACTGTGTTATACTCCCTCCATTTTATATTATAAGTCGTTTTGATTTTTTAAGTCAAACTTCTTGAAAACTTGACAAAGTTTATAGAAAATATAAAAAAAAGTATCACCAAATTAATTTTATTAAATCTATTAAATATATTTTGATAGTTTATTTGTTTTATGTTAATAATATTGCTATTATTTTTTATAAGTTTTGTGAAAGCTAAAGAACTTGACTTAGTTAAAAAATCAAGGAAAAAGTCTAAATAACCCCCCTAAACTTTAGATACAAATTCATCTAGCACCCTGAACTTTAAAACCAGACATCCAACCTCTCTGAACTTTGCAAAACTGTTCATATTACTTCCTAAGATGGTTTTGTATATAAATTGGACAAGTTTGATCACGTGATATACACATTAGACATATATGTTAAAATCTCAGCTTAAATCTTTCTTTTTTTCAATTGTTAGCTTTTGTTAGCTCTTATAAACAAGTACCTATATAATAATAATATATTATCACCGTATAAGTATAAATTGATGACTTACAACTGATGATATCCAAATATGTTATATTGGTTATTTAAAGTTCTTTGTTTAAGCTACCAAAATATGCAAAATCACCATCCAAAACCATATTAGGGGGTAATATGAGCGATTTTACAAAGTTCGGGGAGTTAGATGTCTGGTATTAAAGTTTAGAGTGCTAGATGGATTTATCCAAAGTTTAGGGTGGTATTTGGATTTTTTCCAAAAAATCAAAACAACTTATAGTATGAAACAGAGGTAGTAAAATATAAGCACTTATAGGTTTGAGGAAACCTTGAGTAGAAAAAAACTTTGATTTCTCTTATGAATATGGGATGGTTGGGGAATAAGATGGGAAAAAAATTGAATGCTGCTTGGTTAAAACAACAAATAGTATTCATGAAATGCTTGTATATTTTTATAAATGTCATAGTCGAGAAATGCTTATATTTTGACATAGATGGAATATAACTCAGTGAGGTGCTGGCTTGTTATACCTAATCATGATCCTATGGTGTGGTTTCATTCATTTTGAAGTTAAGAATCAATGATTTCATCTAGATAACACTTTAAATACTTATGACAATGTTGGAAAGAAAACAGATAACTCTAGTATAATGCATGTTTATTGTCTCATTCTGAACTTAACCCATGCGCGTGCATCGAGAAACGAAGAGATAAATCAAAACTATGAACAATATCGCACTGTTCATCACTGGATTACACTTATATTTAATTTTTTTGGTAGGTATAGACGTAATTGTTGTGGGCTCGTTAGACGCCACAGTATAATCAATATTGTCTTCCAATTTTCCAAAACTTTGGATTGTATTCGATAAGTAATGATGTCCCCACGATGCTAAGTAAGGACACCTGTGATTTAATCTTATGGCTGCAGGAAATATTTATTGCAACGGTAGACAATCCATCGAATGCTGTAGAGTGGGCACTGGCCGAGATGGTAAACAATCCAAATGTTATGAAGAAGGCAGTGGACGAGCTTGATGTCGTTGTCGGTAAGGAAAGACTTGTCGAGGAATCCGACATTCAGAACCTCACATACCTCAAGGCATGTATCCGGGAGGCGTTCCGCATTCACCCCTACCACCCGTTCAATCCACCCCATGTTGCCATATCTGACACGATCATCGCCGGATACTTGATACCAAAGGATAGCCATGTAATGCTAAGCCGAATTGGGCTTGGCCGGAACCCTAGAGTATGGGTTAACCCACTTGAATTTCGACCAGAGCGACATCTGAACAATGCTACTAGTACTATGGTGCTAGCTGAGCCAGAGTTGCGGTTTGTATCATTCGGTGCTAGTAGGCGTGGCTGCCCTGCCGTGTCACTTGGCACTTCAATTACAATGATGCTATTTGCAAGGCTTCTACAAGGGTTCACTTGGAGCATACCCCCTGGTGCAGACAAGATAGAGCTTCAGGAGTCAGCTTCGAGCCTCCAATTGTCTAAACCACTGCTTATGCAAGCAAAACCACGATTACTGCTCCATCTATATGAGCTAGATAGGCTCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003503