BGIOSGA003505

From RiceWiki
Revision as of 10:52, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003505| Description = 40S ribosomal protein S4Putative uncharacterized| Definition = Oryza sativa Indica Group BGIOSGA003505, complete gene....")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA003505

Description

40S ribosomal protein S4Putative uncharacterized

Definition

Oryza sativa Indica Group BGIOSGA003505, complete gene.

LocusTag

P0514H03.14

Ensembl Transcript ID

BGIOSGA003505-TA

Ensembl Protein ID

BGIOSGA003505-PA

Length

1682

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:16113067..16114748

Sequence Coding Region

16113067..16113069,16113644..16113721,16113830..16114010,16114117..16114214,16114311..16114748

Genome Context

<gbrowseImage1> name=IndicaChromosome01:16113067..16114748 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:16113067..16114748 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAGGGGATTGAAGAAGCATCTCAAGAGGCTCAATGCGCCCAAGCACTGGATGCTCGACAAGCTCGGCGGAGCTTTTGCCCCCAAGCCATCGTCTGGACCTCACAAGTCCAGGGAGTGCCTTCCCCTGATCCTCATCATCAGGAACAGGTTGAAGTATGCGCTGACATACCGTGAGGTTATCTCTATCCTGATGCAGCGGCATGTCTTGGTTGATGGGAAGGTCAGGACTGACAAGACCTACCCTGCTGGTTTCATGGATGTGATTTCCATTCCAAAGACTGGTGAGAACTACAGGCTTCTCTATGACACCAAGGGTCGCTTCCGCCTTCAGTCCGTCAAGGATGAGGATGCCAAGTTCAAGCTTTGCAAAGTTCGGTCTGTCCAGTTTGGACAGAAGGGCATTCCCTATCTGAACACCTATGATGGACGCACCATCCGCTACCCGGACCCTTTGATTAAGGCTAACGACACAATCAAGATTGATCTTGAGACCAACAAGATTGTTGACTTCATCAAGTTTGATGTGGGCAATGTCGTTATGGTCACAGGAGGGAGGAACACTGGTCGTGTTGGAGTAATTAAGAACAGGGAGAAGCACAAGGGCAGTTTTGAGACCATCCATGTGGAGGACGCATTGGGCCATGCCTTCGCCACCCGTCTGGGCAATGTGTTCACCATCGGCAAGGGCAACAAGCCATGGGTGTCTCTCCCTAAGGGCAAGGGTATCAAGCTCAGCATCATCGAGGAACAGAGGAAGCGAGATGCTGCTGCTCAGGCTGCTGCAAATGCTTAA</cdnaseq>

Protein Sequence

<aaseq>MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDALGHAFATRLGNVFTIGKGNKPWVSLPKGKGIKLSIIEEQRKRDAAAQAAANA</aaseq>

Gene Sequence

<dnaseqindica>1..3#578..655#764..944#1051..1148#1245..1682#ATGGTGAGCGCCGCGCCGTTTCTCCCGTTACGTCTCAGTTTCATAGTCTCTGTACTTGTGTAGCACCGGTGTCTTCTTCTTCTGTTCTTTAGTTTCGGGTCGAGTGGTAGCAGGATGGGCTTGTGTTTAGCTTGTGTGGTGGTAATGTTAAGAGGGAGAATTGAGAGATTGGGGGAGGATTTGGTTTGGTTCTTGGGAATTGATGCGGTGTGCATTGTTGTAGATTGGCGGGCAGGTGTGATGAGGGCTATGCAATCTTTTTTTCGTGTTATGTTTCCTATTTCCTGTTTCTTGATGGCAGCATATGTATGATGATTACCTTTTGATGTAGTAACTGATTTAAGTTGTGTGCTGTTTGATATATTCTTACTAATTTTATATAGGAATTAGATTCCAAGATATGTAGTTAAACAGTATGGATCCTGTTGGGATCTAGAATTATATTGTGGATATACAGTATCGAGCCTATTGCTATCTAGAATTATATTGTTGTACTGGCTTTTAAGAAGCATCACAATTCTGTGAGTATGTGGTTAATAACATACTTAACGTTGTCAACCTGTTATTTTCTGAACAGGCGAGGGGATTGAAGAAGCATCTCAAGAGGCTCAATGCGCCCAAGCACTGGATGCTCGACAAGCTCGGCGGAGCTTTTGTGAGTTTACTGATTTCCTGTGATGTGCTTGAAATGGCCTCTGCCATTTGCGACTATTTTCTGTTATTCAGTAATGTAATTCGCCGAACTGCTTTGTGTGCCTTCCAGGCCCCCAAGCCATCGTCTGGACCTCACAAGTCCAGGGAGTGCCTTCCCCTGATCCTCATCATCAGGAACAGGTTGAAGTATGCGCTGACATACCGTGAGGTTATCTCTATCCTGATGCAGCGGCATGTCTTGGTTGATGGGAAGGTCAGGACTGACAAGACCTACCCTGCTGGTTTCATGGGTATGCACGCATGTTTCTTTTCTGACCCGTCGTTATCTTGTATGGTCTGGTATGCAAGTGGTTCATTTCTAGCATACCTTACATGGTAATGCCCTCTGTTTGGCAGATGTGATTTCCATTCCAAAGACTGGTGAGAACTACAGGCTTCTCTATGACACCAAGGGTCGCTTCCGCCTTCAGTCCGTCAAGGATGAGGATGCCAAGGTTAGCGTTGCTTCTTTTCACTCATGCACACGTGAATGTAAATTCTCTATTCTGTTTTGTAGTCTAAATGTTTGTGACCCGCTCTTTTATATGCAGTTCAAGCTTTGCAAAGTTCGGTCTGTCCAGTTTGGACAGAAGGGCATTCCCTATCTGAACACCTATGATGGACGCACCATCCGCTACCCGGACCCTTTGATTAAGGCTAACGACACAATCAAGATTGATCTTGAGACCAACAAGATTGTTGACTTCATCAAGTTTGATGTGGGCAATGTCGTTATGGTCACAGGAGGGAGGAACACTGGTCGTGTTGGAGTAATTAAGAACAGGGAGAAGCACAAGGGCAGTTTTGAGACCATCCATGTGGAGGACGCATTGGGCCATGCCTTCGCCACCCGTCTGGGCAATGTGTTCACCATCGGCAAGGGCAACAAGCCATGGGTGTCTCTCCCTAAGGGCAAGGGTATCAAGCTCAGCATCATCGAGGAACAGAGGAAGCGAGATGCTGCTGCTCAGGCTGCTGCAAATGCTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003505