BGIOSGA003518

From RiceWiki
Revision as of 10:52, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA003518| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA003518, complete gene.| tag = OsI_019...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA003518

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003518, complete gene.

LocusTag

OsI_01925

Ensembl Transcript ID

BGIOSGA003518-TA

Ensembl Protein ID

BGIOSGA003518-PA

Length

3303

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:16471996..16475298

Sequence Coding Region

16471996..16472827,16473156..16473305,16474070..16474230,16474936..16475298

Genome Context

<gbrowseImage1> name=IndicaChromosome01:16471996..16475298 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:16471996..16475298 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCATATATGATATCTATATCAGCTCAGCCTGCCTCTAGATGCCAGACATTCTGCGGTGATGTAGAAATCCCATACCCATTTGGCATTGGTGCAGGTTGTGCTATTGAACCAGGTTTTGAATTATCTTGCAACAATACGGCTGATGGATCTATGAAGCCATTCCATACTAATGTCGAGTTCCTAAATATTTCACTGCTTCATGGTCATAGTCGGGCATTGAACCACCTGTCAACAGATTGCTACAATTATAGCACAAAATCAGTGGAGCCAAGCACATGGTGGCTTGACTTCACAGCAACCCCATACCGCTTCTCCGATGTACATAACAAGTTCATAGTGATTGGTTGCAACACGCTTTCATATATTTACAACAGCTATAACAGGACAGGGTATACGACGGCATGTGCATCAGTGTGTGGGAGCATAGAAGCCCTGACAAATGGCTCATGTGCTGGAGTAGGCTGCTGCCAGAATGCCATACCAAAAGGCTTAACTCGCTACGATGTTGCTATGTACATTGTATATAATGATTCAGATAGTTGGCGGTTCAACCCATGCAGCTATGCGGCTCTGGTTGAAACGGACTCGTTTAGTTTTAACACAGAGTACATAACTACAAAGAAGTTCAATGATACGTACAAGGGGCGGCAGCCGCTCGTATTGGACTGGGCAATTGGAAATGTGTCATGCGTTATGGCAGAAAACATGACTTCTTATGCATGCCAGAGCGTAAACAGCATCTGTGTGGATTCAAAGAACGGCCCTGGGTATCTATGCAACTGCACCAATGGGTATCAGGGGAACCCTTACCTCCGCGATGGATGCAAAGATGTCAATGAATGTGACCAAAATACAGGCCCATGCCCAAAGGGTGCAACTTGTCACAACACAATAGGAGGGTACCATTGTTCTTGCCCTCCTGGAAGAAAGTTGGCAAATGATTCAAGCTCATGTAACCCAGACATCAACCTGATCATCGGTGTCTGCATTGGCTCCATTGTTATAGTGATAGTCATCTTCTTCGTGCGTATAATATTTGAGCGAAGAAAGCTTACAGATGTCAAGAAAAAATATTTTCAGCAACATGGAGGGCTGATATTATTTGATAAGATGAAATCAGACCAGGGACTTGCATTTAAGGAGAATAAACTTGAGGAAATGTTGGACAGTCAAATTAAAGATCATGAGAGCATGGAACTGGTCAATGGGCTTGCAGATATAGCTAAGAAATGCTTAGACATGTGCAGTGACAATAGGCCATCAATGAAAGAGGTATCTGAGGAGCTTAGTAGACTACGAAAACTTTCAAAACACCCTTGGATACAGCGTGATACTGAGATAGAGAGCTTTCTCAGTGGACCATCAACTAGTAACCTAGAAACTGAGCACAGCTATCTCAGTGGACCATCAACCAGTAACTTTGAAATCGAGCACAGCACCGAGTATAGAAGGAAGGACGAAGAAATGCCCATAAACCCAAGCACTTCATACTTTATCCGGTGA</cdnaseq>

Protein Sequence

<aaseq>MAYMISISAQPASRCQTFCGDVEIPYPFGIGAGCAIEPGFELSCNNTADGSMKPFHTNVEFLNISLLHGHSRALNHLSTDCYNYSTKSVEPSTWWLDFTATPYRFSDVHNKFIVIGCNTLSYIYNSYNRTGYTTACASVCGSIEALTNGSCAGVGCCQNAIPKGLTRYDVAMYIVYNDSDSWRFNPCSYAALVETDSFSFNTEYITTKKFNDTYKGRQPLVLDWAIGNVSCVMAENMTSYACQSVNSICVDSKNGPGYLCNCTNGYQGNPYLRDGCKDVNECDQNTGPCPKGATCHNTIGGYHCSCPPGRKLANDSSSCNPDINLIIGVCIGSIVIVIVIFFVRIIFERRKLTDVKKKYFQQHGGLILFDKMKSDQGLAFKENKLEEMLDSQIKDHESMELVNGLADIAKKCLDMCSDNRPSMKEVSEELSRLRKLSKHPWIQRDTEIESFLSGPSTSNLETEHSYLSGPSTSNFEIEHSTEYRRKDEEMPINPSTSYFIR</aaseq>

Gene Sequence

<dnaseqindica>1..832#1161..1310#2075..2235#2941..3303#ATGGCATATATGATATCTATATCAGCTCAGCCTGCCTCTAGATGCCAGACATTCTGCGGTGATGTAGAAATCCCATACCCATTTGGCATTGGTGCAGGTTGTGCTATTGAACCAGGTTTTGAATTATCTTGCAACAATACGGCTGATGGATCTATGAAGCCATTCCATACTAATGTCGAGTTCCTAAATATTTCACTGCTTCATGGTCATAGTCGGGCATTGAACCACCTGTCAACAGATTGCTACAATTATAGCACAAAATCAGTGGAGCCAAGCACATGGTGGCTTGACTTCACAGCAACCCCATACCGCTTCTCCGATGTACATAACAAGTTCATAGTGATTGGTTGCAACACGCTTTCATATATTTACAACAGCTATAACAGGACAGGGTATACGACGGCATGTGCATCAGTGTGTGGGAGCATAGAAGCCCTGACAAATGGCTCATGTGCTGGAGTAGGCTGCTGCCAGAATGCCATACCAAAAGGCTTAACTCGCTACGATGTTGCTATGTACATTGTATATAATGATTCAGATAGTTGGCGGTTCAACCCATGCAGCTATGCGGCTCTGGTTGAAACGGACTCGTTTAGTTTTAACACAGAGTACATAACTACAAAGAAGTTCAATGATACGTACAAGGGGCGGCAGCCGCTCGTATTGGACTGGGCAATTGGAAATGTGTCATGCGTTATGGCAGAAAACATGACTTCTTATGCATGCCAGAGCGTAAACAGCATCTGTGTGGATTCAAAGAACGGCCCTGGGTATCTATGCAACTGCACCAATGGGTATCAGGGGAACCCTTACCTCCGCGATGGATGCAAAGGTATAATTAGTTGAGGAAAAAAATCTTTCAGTATGCAATAATTTATAACGAATCAAGAGAAGCATAAACAAATTTACCTCCTTTTTGTTTGTACTTTTGTTAATCCAATGAGAACATAAGAGTATAAGACCCATATATATTCAGTACTTCCATTTTTTTTGAAATTTAAGAAAAATATTGGTAGACAAATGCTTTTTTTGGCCTATTATCTACCAGGGCTGTATCATTTCCCTCTACAACATAGCATTTTCATGTTTGCTTGATACAATAATCTTCAATCTTATTTGCTTGACTGGACCAAAATAATATGTTCATTTTTGCAATGCAGATGTCAATGAATGTGACCAAAATACAGGCCCATGCCCAAAGGGTGCAACTTGTCACAACACAATAGGAGGGTACCATTGTTCTTGCCCTCCTGGAAGAAAGTTGGCAAATGATTCAAGCTCATGTAACCCAGACATCAACCTGATCATCGGTAAAGAGCTCAAACATAGGAGCTTGCTAAACTCTTCTGTCAAATACACAAATTGCATCTGTGCATTCAACTCTAGTACTCCCTCCTTCCCTAAATGTTTGACGCTGTTGACTTTTTTAAACATGTTTGACCGCTCATCTTATTTAAAAACTTCTGTAAAATGTGTAAAACTATATATATACATAAAAGTATATTTAACAATAAATCAAATGATAGGAAAAAATTAATAATTACTTAAATTTTTTGAATAAAGCAAACGGTCAAATATTTTTAAAAAAGTCAACGGCGTCAAACATTTTAGGATGGAGGGAGTATATTTCAAGAAGCTAATTCATAAGTTTAGTAGTCAGCATAATGTAAAGGAATCTCTTACTCCACGGGTACATATGCTGATGTGCACAATATCATTACAAATACATCTGTGAATATGAAAATAAGAGCTTCTGTTCGTAAAATTGTGGCATGAATAAGAGCTTCGGTTCTTGCCATGAATAAGATCAAACAATGCACAGAACAAGCGAGCATATTGTGGCATGACCATGCAATCGGGGTATTTCTAGGAATTTTAACTGAGAAGATGAGAAAGTATTAAATTAAATTAATAAAACCAGCAAAAATAATGAAATTTAAATCTCTGAAGACAGCAGTGCATTATTGGTAAATGATTATGTTGTATCATCACCACAATGAGTATTTTGATACGCTTTTGTTAGTACAAATGTGTGGTTTATTTTAACGCAGCAATTTGATATAAATTTATGCAGGTGTCTGCATTGGCTCCATTGTTATAGTGATAGTCATCTTCTTCGTGCGTATAATATTTGAGCGAAGAAAGCTTACAGATGTCAAGAAAAAATATTTTCAGCAACATGGAGGGCTGATATTATTTGATAAGATGAAATCAGACCAGGGACTTGCATTTAAGGTGTTCACTCAAGCAGAGCTAGAACAGGCAACAAACAAGTTTGAGAAAAGCCAGATTCTTGGACATGGAGGACATGGCACCGTGTACAAGGGAATAACTAAGGATAACATTACAGTGGCAATTAAAAAATGTGCATTGATTGATGATAGGCATAAGAAGGAATTTGGTAAAGAAATGTTAATCCTTTCACAGATCAACCACAAGAACGTTGTTAAGCTACTGGGTTGCTGCCTTGAAGTGGATGTCCCAATGCTAGTTTATGAGTTCATCCCAAATGGAACATTATTTGATCTTATTCATGGCAAGAACCGAACATTTCACATCCCTTTTAGTTCACTCCTAAAAATTGTTAATGAGGCAGCTGAAGGGCTTGCCTTTTTACATTCCTATGCAAACCCACCAATTCTGCATGGTGACGTGAAAACCTCTAATATCCTTCTTGATGAGAATTACATGGCAAAGGTATCAGATTTTGGGGCCTCCATATTAGCACCAACTGATGAAGACCAATTTGTGACAATGGTTCAAGGGACATGTGGCTATCTAGATCCTGAATATCTGCAAACATGCAGATTGACAGAAAAGAGCGATGTTTATAGCTTTGGTGTGGTCCTCTTGGAGGTCCTCACTGGGCAGATGCCATTGAAGTTTGAAGGACCTGAGATTCAGAAAAGCTTGTCATCAAGTTTCCTACTGGCAATGAAGGAGAATAAACTTGAGGAAATGTTGGACAGTCAAATTAAAGATCATGAGAGCATGGAACTGGTCAATGGGCTTGCAGATATAGCTAAGAAATGCTTAGACATGTGCAGTGACAATAGGCCATCAATGAAAGAGGTATCTGAGGAGCTTAGTAGACTACGAAAACTTTCAAAACACCCTTGGATACAGCGTGATACTGAGATAGAGAGCTTTCTCAGTGGACCATCAACTAGTAACCTAGAAACTGAGCACAGCTATCTCAGTGGACCATCAACCAGTAACTTTGAAATCGAGCACAGCACCGAGTATAGAAGGAAGGACGAAGAAATGCCCATAAACCCAAGCACTTCATACTTTATCCGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003518